Click here to switch to the map view.

The map label for this gene is 148379148

Identifier: 148379148

GI number: 148379148

Start: 1275868

End: 1276875

Strand: Direct

Name: 148379148

Synonym: CBO1162

Alternate gene names: NA

Gene position: 1275868-1276875 (Clockwise)

Preceding gene: 148379147

Following gene: 148379149

Centisome position: 32.82

GC content: 29.17

Gene sequence:

>1008_bases
ATGGTAGTAAAAAGAAAAATTTCAATTCTATTGGCACTGATTTTTTCAGTTGCTATCTTTGGAGGTTGCTCAAAAATCTC
CAGTGCAAAAACACTAAAGGATAAAAAGGTTATAAACATAGGTATAGCTCAAATAATAGAGCATCCAGCTTTAGATTTAG
CCAAAAAAGGATTTGTAGATAGACTAGCAGAAAAAGGATTTAAAGATGGAGAAAATATAAAGATAGATTTTCAAAATGCT
CAAGGAGATATGGCTACAATTCAAACTATAACTCAAAATTTTGTAGCTCAAAGAAGTGATATTATATATGCAATAGCAAC
TCCTTCAGTACAAGCGGCCTTTAATGCTACTAAAAAAATACCTATAGTTATGACAGCCATTACAGATCCTGTAGAATCAG
GAGTTGTAAAATCTTTAGACAAATCAGGCACTAATGTTGCTGGAACTTCAGATAAAATATCCATAGAGGAAAATTTTAAG
TTAATAAAAGAGATATTACCTGGGAAAAAAACCATAGGAATATTATATAATACTAGTGAAAAAAATTCTGAAATACAGGT
TAGACAAGCAGAAGAAAAGGCTAAAAAATTTGGATTTAAAATTGTTAAAAAAGGCATAACAAATGTTAATGATATTCATC
AATCCTTAGCTTCTATATTAAATCAAATTGATATTATGTTCATTCCTACAGATAATACAGTAGCTTCTTCTATGCCATTT
ATAAGTAATGAATGCAATAAAAAGAATATACCAATAATAGGATCAGAAAAAGCCCATGTAGAAGGTGGAGCATTGGCTAC
ATCAGGTATAGATTACTACAAATTAGGAAAAGAATCTGCGGATGTGGCTATAGAAATTATAAATGGTAAAAATCCTAAAG
ATATGAAAGTGAAATTTATGAAAGAAACTAAATTATCAATAAACCCAGAAGTGGCTAAAAAATTAAACATAAAAATACCA
CAGGATATAGAAGATAAAGCTGAAAAAATCAAAGGAGGAAAAAAATAA

Upstream 100 bases:

>100_bases
GGTTTTTTTATTTATGCAAATAAAATCTTTACTGCTTATTGTTTTTCATTATATTTTGCAAAATAAAAATATATAAATTA
AAATTTTGGAGGATGGTAGT

Downstream 100 bases:

>100_bases
TGGATATTTTATTAGCAGTATTAGAGCAAGGATTTATATTTTCCATTGTTTGCTTTGGAGTATATATAACATATAAAATA
TTAGATTTCCCAGACCTTTC

Product: ABC transporter substrate-binding protein

Products: NA

Alternate protein names: ABC Transporter; Lipoprotein; ABC Transporter Permease; ABC Transporter Periplasmic Protein; ABC-Type Transporter Periplasmic Component; Permease; Permease Protein; Exported Protein; ABC-Type Transport Protein Periplasmic C; ABC Transporter Permease Protein; ABC-Type Transporter

Number of amino acids: Translated: 335; Mature: 335

Protein sequence:

>335_residues
MVVKRKISILLALIFSVAIFGGCSKISSAKTLKDKKVINIGIAQIIEHPALDLAKKGFVDRLAEKGFKDGENIKIDFQNA
QGDMATIQTITQNFVAQRSDIIYAIATPSVQAAFNATKKIPIVMTAITDPVESGVVKSLDKSGTNVAGTSDKISIEENFK
LIKEILPGKKTIGILYNTSEKNSEIQVRQAEEKAKKFGFKIVKKGITNVNDIHQSLASILNQIDIMFIPTDNTVASSMPF
ISNECNKKNIPIIGSEKAHVEGGALATSGIDYYKLGKESADVAIEIINGKNPKDMKVKFMKETKLSINPEVAKKLNIKIP
QDIEDKAEKIKGGKK

Sequences:

>Translated_335_residues
MVVKRKISILLALIFSVAIFGGCSKISSAKTLKDKKVINIGIAQIIEHPALDLAKKGFVDRLAEKGFKDGENIKIDFQNA
QGDMATIQTITQNFVAQRSDIIYAIATPSVQAAFNATKKIPIVMTAITDPVESGVVKSLDKSGTNVAGTSDKISIEENFK
LIKEILPGKKTIGILYNTSEKNSEIQVRQAEEKAKKFGFKIVKKGITNVNDIHQSLASILNQIDIMFIPTDNTVASSMPF
ISNECNKKNIPIIGSEKAHVEGGALATSGIDYYKLGKESADVAIEIINGKNPKDMKVKFMKETKLSINPEVAKKLNIKIP
QDIEDKAEKIKGGKK
>Mature_335_residues
MVVKRKISILLALIFSVAIFGGCSKISSAKTLKDKKVINIGIAQIIEHPALDLAKKGFVDRLAEKGFKDGENIKIDFQNA
QGDMATIQTITQNFVAQRSDIIYAIATPSVQAAFNATKKIPIVMTAITDPVESGVVKSLDKSGTNVAGTSDKISIEENFK
LIKEILPGKKTIGILYNTSEKNSEIQVRQAEEKAKKFGFKIVKKGITNVNDIHQSLASILNQIDIMFIPTDNTVASSMPF
ISNECNKKNIPIIGSEKAHVEGGALATSGIDYYKLGKESADVAIEIINGKNPKDMKVKFMKETKLSINPEVAKKLNIKIP
QDIEDKAEKIKGGKK

Specific function: Unknown

COG id: COG2984

COG function: function code R; ABC-type uncharacterized transport system, periplasmic component

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 36503; Mature: 36503

Theoretical pI: Translated: 10.11; Mature: 10.11

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVVKRKISILLALIFSVAIFGGCSKISSAKTLKDKKVINIGIAQIIEHPALDLAKKGFVD
CCCHHHHHHHHHHHHHHHHHCCHHHHCHHHHHCCCCEEEHHHHHHHHCCHHHHHHHHHHH
RLAEKGFKDGENIKIDFQNAQGDMATIQTITQNFVAQRSDIIYAIATPSVQAAFNATKKI
HHHHCCCCCCCEEEEEEECCCCCHHHHHHHHHHHHHHCCCEEEEEECCCHHHHHCCCCCC
PIVMTAITDPVESGVVKSLDKSGTNVAGTSDKISIEENFKLIKEILPGKKTIGILYNTSE
CEEEEECCCCHHHHHHHHHHCCCCCCCCCCCCEEHHHHHHHHHHHCCCCCEEEEEEECCC
KNSEIQVRQAEEKAKKFGFKIVKKGITNVNDIHQSLASILNQIDIMFIPTDNTVASSMPF
CCCEEEEHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCEEEEEECCCCHHHCCCC
ISNECNKKNIPIIGSEKAHVEGGALATSGIDYYKLGKESADVAIEIINGKNPKDMKVKFM
HHCCCCCCCCCEECCCCCCCCCCEEEECCCCHHHCCCCCCCEEEEEECCCCCCCCEEEEE
KETKLSINPEVAKKLNIKIPQDIEDKAEKIKGGKK
ECCCCCCCHHHHHHCCCCCCCCHHHHHHHCCCCCC
>Mature Secondary Structure
MVVKRKISILLALIFSVAIFGGCSKISSAKTLKDKKVINIGIAQIIEHPALDLAKKGFVD
CCCHHHHHHHHHHHHHHHHHCCHHHHCHHHHHCCCCEEEHHHHHHHHCCHHHHHHHHHHH
RLAEKGFKDGENIKIDFQNAQGDMATIQTITQNFVAQRSDIIYAIATPSVQAAFNATKKI
HHHHCCCCCCCEEEEEEECCCCCHHHHHHHHHHHHHHCCCEEEEEECCCHHHHHCCCCCC
PIVMTAITDPVESGVVKSLDKSGTNVAGTSDKISIEENFKLIKEILPGKKTIGILYNTSE
CEEEEECCCCHHHHHHHHHHCCCCCCCCCCCCEEHHHHHHHHHHHCCCCCEEEEEEECCC
KNSEIQVRQAEEKAKKFGFKIVKKGITNVNDIHQSLASILNQIDIMFIPTDNTVASSMPF
CCCEEEEHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCEEEEEECCCCHHHCCCC
ISNECNKKNIPIIGSEKAHVEGGALATSGIDYYKLGKESADVAIEIINGKNPKDMKVKFM
HHCCCCCCCCCEECCCCCCCCCCEEEECCCCHHHCCCCCCCEEEEEECCCCCCCCEEEEE
KETKLSINPEVAKKLNIKIPQDIEDKAEKIKGGKK
ECCCCCCCHHHHHHCCCCCCCCHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA