Click here to switch to the map view.

The map label for this gene is yxeM [H]

Identifier: 148379138

GI number: 148379138

Start: 1264087

End: 1264926

Strand: Direct

Name: yxeM [H]

Synonym: CBO1151

Alternate gene names: 148379138

Gene position: 1264087-1264926 (Clockwise)

Preceding gene: 148379137

Following gene: 148379139

Centisome position: 32.52

GC content: 31.19

Gene sequence:

>840_bases
ATGAAAAACATTAAAAAGGCATTTTTATTTGTAGTATTTATTTGTATGACTTTTACTATGACTGCATGTGGAGGTAAAAA
TAATGATTCTCAAAAGAAAGAAGAAGCTAAAGCGCCTACCAAAATTGTTGTAGCATCTGGTGCAGCCTCAGTACCTAATT
CATATGTAGAAAATGGAGTACATAAAGGACATGAAGTAGACATCTGGAATGCTATTTCTAAAAGGACTGGCATTAAAGTT
GAATTTGTAACTGGTGAGTTTAATACTTTATTTGGGTATTTAGATTCTGGAAAAGCTGATACAGTTGGAAACACTATTAC
AATTAATGCTAGTAGACAGGATAAGTATAACTTCTCAGAGCCATATGCATATATCCCAGAAAAATTAGTTGTACATTCAA
ATAGAACTGATATTAAAAAATTGAAAGATGTTGCTGGTATGACTTGTGGATTTATAGCTGGTTCAAATGGTGGAAATTTA
TTTGAGAAAATGGCTAAAGAACAAGGAATCGATATTAAGTTAGTTACATATGATAGTTCCGAGTTATTAAATCAAGCTTT
TAATCAAGGAAAAGTTGATGTTATGCTTTTATCAGCTGCTGAGGTAGCATATAAAATCAAAAATGGACTTCTTGATGCCA
GAATGGTTGAAGAAGATGTTGTAGTTGGAGCAAAAGCATATCCATTTGTAAAAGGAAATTCTAATTCAGAACAATTAAAT
AAAACAGTTACAAAAGCTATCGAAGATATGAGAAAAGATGGTACATTAACACAAATATATGGGAAATGGTACGATATAGA
TTTTAGTCAAAAACCAAAGGATGCTAAGATAGGCAATTAA

Upstream 100 bases:

>100_bases
AAAAAATTCAAAGATTATTAGAAAAAAGGATTGAAAAATTCTGTTAACGTATAAATTTTAAATTTATATAAATTATATTA
AAAATAGGAGGAACTATAAA

Downstream 100 bases:

>100_bases
TATTTATAAGATATAAAAAATTTCATGATATATTCTGGTCAAGTTTGTCATGTTTTTATGAGGTAAAGAAGATTATGAAT
AGTAAAATAAAAAATATTGC

Product: ABC transporter, substrate-binding lipoprotein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 279; Mature: 279

Protein sequence:

>279_residues
MKNIKKAFLFVVFICMTFTMTACGGKNNDSQKKEEAKAPTKIVVASGAASVPNSYVENGVHKGHEVDIWNAISKRTGIKV
EFVTGEFNTLFGYLDSGKADTVGNTITINASRQDKYNFSEPYAYIPEKLVVHSNRTDIKKLKDVAGMTCGFIAGSNGGNL
FEKMAKEQGIDIKLVTYDSSELLNQAFNQGKVDVMLLSAAEVAYKIKNGLLDARMVEEDVVVGAKAYPFVKGNSNSEQLN
KTVTKAIEDMRKDGTLTQIYGKWYDIDFSQKPKDAKIGN

Sequences:

>Translated_279_residues
MKNIKKAFLFVVFICMTFTMTACGGKNNDSQKKEEAKAPTKIVVASGAASVPNSYVENGVHKGHEVDIWNAISKRTGIKV
EFVTGEFNTLFGYLDSGKADTVGNTITINASRQDKYNFSEPYAYIPEKLVVHSNRTDIKKLKDVAGMTCGFIAGSNGGNL
FEKMAKEQGIDIKLVTYDSSELLNQAFNQGKVDVMLLSAAEVAYKIKNGLLDARMVEEDVVVGAKAYPFVKGNSNSEQLN
KTVTKAIEDMRKDGTLTQIYGKWYDIDFSQKPKDAKIGN
>Mature_279_residues
MKNIKKAFLFVVFICMTFTMTACGGKNNDSQKKEEAKAPTKIVVASGAASVPNSYVENGVHKGHEVDIWNAISKRTGIKV
EFVTGEFNTLFGYLDSGKADTVGNTITINASRQDKYNFSEPYAYIPEKLVVHSNRTDIKKLKDVAGMTCGFIAGSNGGNL
FEKMAKEQGIDIKLVTYDSSELLNQAFNQGKVDVMLLSAAEVAYKIKNGLLDARMVEEDVVVGAKAYPFVKGNSNSEQLN
KTVTKAIEDMRKDGTLTQIYGKWYDIDFSQKPKDAKIGN

Specific function: Probably part of the ABC transporter complex yxeMNO that could be involved in amino-acid import. May transport S- methylcysteine [H]

COG id: COG0834

COG function: function code ET; ABC-type amino acid transport/signal transduction systems, periplasmic component/domain

Gene ontology:

Cell location: Cell membrane; Lipid-anchor (Probable) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the bacterial solute-binding protein 3 family [H]

Homologues:

Organism=Escherichia coli, GI1788228, Length=220, Percent_Identity=29.5454545454545, Blast_Score=82, Evalue=3e-17,
Organism=Escherichia coli, GI1787031, Length=239, Percent_Identity=26.7782426778243, Blast_Score=69, Evalue=3e-13,

Paralogues:

None

Copy number: 1920 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 1060 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 80 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR015683
- InterPro:   IPR001638
- InterPro:   IPR018313 [H]

Pfam domain/function: PF00497 SBP_bac_3 [H]

EC number: NA

Molecular weight: Translated: 30673; Mature: 30673

Theoretical pI: Translated: 8.95; Mature: 8.95

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKNIKKAFLFVVFICMTFTMTACGGKNNDSQKKEEAKAPTKIVVASGAASVPNSYVENGV
CCHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHCCCEEEEEECCCCCCCHHHHHHHC
HKGHEVDIWNAISKRTGIKVEFVTGEFNTLFGYLDSGKADTVGNTITINASRQDKYNFSE
CCCCCCHHHHHHHHCCCCEEEEEECCHHHHHHHHCCCCCCCCCCEEEEECCCCCCCCCCC
PYAYIPEKLVVHSNRTDIKKLKDVAGMTCGFIAGSNGGNLFEKMAKEQGIDIKLVTYDSS
CHHHCCCEEEEECCCHHHHHHHHHHCCEEEEEECCCCCHHHHHHHHHCCCEEEEEEECHH
ELLNQAFNQGKVDVMLLSAAEVAYKIKNGLLDARMVEEDVVVGAKAYPFVKGNSNSEQLN
HHHHHHHCCCCEEEEEEHHHHHHHHHHHCCHHHHHHHHHHEECCCCCCEEECCCCHHHHH
KTVTKAIEDMRKDGTLTQIYGKWYDIDFSQKPKDAKIGN
HHHHHHHHHHHCCCCEEEEECCEEECCCCCCCCCCCCCC
>Mature Secondary Structure
MKNIKKAFLFVVFICMTFTMTACGGKNNDSQKKEEAKAPTKIVVASGAASVPNSYVENGV
CCHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHCCCEEEEEECCCCCCCHHHHHHHC
HKGHEVDIWNAISKRTGIKVEFVTGEFNTLFGYLDSGKADTVGNTITINASRQDKYNFSE
CCCCCCHHHHHHHHCCCCEEEEEECCHHHHHHHHCCCCCCCCCCEEEEECCCCCCCCCCC
PYAYIPEKLVVHSNRTDIKKLKDVAGMTCGFIAGSNGGNLFEKMAKEQGIDIKLVTYDSS
CHHHCCCEEEEECCCHHHHHHHHHHCCEEEEEECCCCCHHHHHHHHHCCCEEEEEEECHH
ELLNQAFNQGKVDVMLLSAAEVAYKIKNGLLDARMVEEDVVVGAKAYPFVKGNSNSEQLN
HHHHHHHCCCCEEEEEEHHHHHHHHHHHCCHHHHHHHHHHEECCCCCCEEECCCCHHHHH
KTVTKAIEDMRKDGTLTQIYGKWYDIDFSQKPKDAKIGN
HHHHHHHHHHHCCCCEEEEECCEEECCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8867804; 9384377 [H]