| Definition | Clostridium botulinum A str. ATCC 3502, complete genome. |
|---|---|
| Accession | NC_009495 |
| Length | 3,886,916 |
Click here to switch to the map view.
The map label for this gene is 148379115
Identifier: 148379115
GI number: 148379115
Start: 1237932
End: 1239254
Strand: Direct
Name: 148379115
Synonym: CBO1128
Alternate gene names: NA
Gene position: 1237932-1239254 (Clockwise)
Preceding gene: 148379114
Following gene: 148379116
Centisome position: 31.85
GC content: 28.65
Gene sequence:
>1323_bases ATGACCATATTAAAATCATTTAGAGCAATAAGACCTAATAAAGGATTTGAATGTAAAATAGCAGCCTTACCTTATGATGT AGTAAATACTGATGAAGCTAGAGAAATAGGGGGCAAAAACCCCTATTCTTTCCTACATATAGATAGAGCAGAAATAGATT TAAATAAAGACATTAACCCTTATGACCTAAAAGTTTATGATAAGGCAAGAGAGAACTTAAATAACATGATAAACAAAGAA CTATTTATAAAAGAAGAAAAACCAATGTTATATATTTATAGTCTTAATATGAATGGAAATGTCCAAACAGGTATAGTAGG TTGTTTATCTATTGATGATTATATGAATAATGTAATAAAAAAACACGAGCACACTAGAGAAGAAAAAGAATTAGATAGAA TAAAACATGTAGATACTTGCAGTGCTCATACAGGACCTATATTTTTAACCTATAAACATGAAGAAAAATTGAATACTATA ATAGAAAACTGCACTAAAAATAAGGCTTTATATGATTTTGTAGCAGAGGATGGGGTTAGACATACAGTATGGCAAATAGA TGATGAAAATACAATAGAAGAAATATGCCATATATTTAAAGCTATACCTTCTGTTTATATAGCAGATGGCCATCATAGAG CAGCTTCAGCAGTAAAAGTAGGATTAAAAAGAAGGGAAGAAAATGAGAACTACACAGGAAAAGAAGAATTCAATTATTTT TTAGGTGTACTTTTTCCACATAAGGAATTAAAAATAATGGACTACAATAGAGTGGTAAAGGATACATTAGGCTATACAGA AGAAGAATTTATAAATAAAATAGAAGAAAAATTTATAGTAAAACCATATAATCCTAAATTAGAAAATAAAAAAACTATAA AAAATTGTGAAGCGGAGCATAAGTTACAAAGTGAACAACTAGAAAAAGCAGAAGAGCTACAATATAGACCTAAAGAGAAA TATAATTTTGGTATGTATTATAAAAAGAAATGGTATGAACTAAAGGCAAAACCAAATACATTTAATGTTGAAGATGAGGT GGAATCCTTAGACGCAGCTATATTACAAAATAATTTATTACAACCAATACTTAAAATACAAGATCCAAGAAAGGATAATA GAATAGATTTTGTAGGTGGTATAAGAGGCTTAAAAATATTAGAAGAATTAGTGGATAAAACAGAAAATGGGGTAGCCTTT TCTATGTATCCTACAGCCATAGAAGAGATAATAAAAATAGCAGACAATAATAAGGTTATGCCACCAAAATCCACCTGGTT TGAACCCAAATTAAGAAGCGGACTATTTATACATGAAATATAA
Upstream 100 bases:
>100_bases ACACCTCATATAGGGGCATCTACTAAAGAAGCGCAGATGAGAATAGGAGAAGAAATAGTAGATATATTAGATAATTTTTT CAATATAGGAGGAGAAGAAC
Downstream 100 bases:
>100_bases TGAAATGCTAAAGGTAAAGTATTAGGGTGTTAAAATATAAATATCAAGGGGAGTTCATTAATAAATAAAAAATTTCAAAT AAGAATAAAAGACAGTGAAT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 440; Mature: 439
Protein sequence:
>440_residues MTILKSFRAIRPNKGFECKIAALPYDVVNTDEAREIGGKNPYSFLHIDRAEIDLNKDINPYDLKVYDKARENLNNMINKE LFIKEEKPMLYIYSLNMNGNVQTGIVGCLSIDDYMNNVIKKHEHTREEKELDRIKHVDTCSAHTGPIFLTYKHEEKLNTI IENCTKNKALYDFVAEDGVRHTVWQIDDENTIEEICHIFKAIPSVYIADGHHRAASAVKVGLKRREENENYTGKEEFNYF LGVLFPHKELKIMDYNRVVKDTLGYTEEEFINKIEEKFIVKPYNPKLENKKTIKNCEAEHKLQSEQLEKAEELQYRPKEK YNFGMYYKKKWYELKAKPNTFNVEDEVESLDAAILQNNLLQPILKIQDPRKDNRIDFVGGIRGLKILEELVDKTENGVAF SMYPTAIEEIIKIADNNKVMPPKSTWFEPKLRSGLFIHEI
Sequences:
>Translated_440_residues MTILKSFRAIRPNKGFECKIAALPYDVVNTDEAREIGGKNPYSFLHIDRAEIDLNKDINPYDLKVYDKARENLNNMINKE LFIKEEKPMLYIYSLNMNGNVQTGIVGCLSIDDYMNNVIKKHEHTREEKELDRIKHVDTCSAHTGPIFLTYKHEEKLNTI IENCTKNKALYDFVAEDGVRHTVWQIDDENTIEEICHIFKAIPSVYIADGHHRAASAVKVGLKRREENENYTGKEEFNYF LGVLFPHKELKIMDYNRVVKDTLGYTEEEFINKIEEKFIVKPYNPKLENKKTIKNCEAEHKLQSEQLEKAEELQYRPKEK YNFGMYYKKKWYELKAKPNTFNVEDEVESLDAAILQNNLLQPILKIQDPRKDNRIDFVGGIRGLKILEELVDKTENGVAF SMYPTAIEEIIKIADNNKVMPPKSTWFEPKLRSGLFIHEI >Mature_439_residues TILKSFRAIRPNKGFECKIAALPYDVVNTDEAREIGGKNPYSFLHIDRAEIDLNKDINPYDLKVYDKARENLNNMINKEL FIKEEKPMLYIYSLNMNGNVQTGIVGCLSIDDYMNNVIKKHEHTREEKELDRIKHVDTCSAHTGPIFLTYKHEEKLNTII ENCTKNKALYDFVAEDGVRHTVWQIDDENTIEEICHIFKAIPSVYIADGHHRAASAVKVGLKRREENENYTGKEEFNYFL GVLFPHKELKIMDYNRVVKDTLGYTEEEFINKIEEKFIVKPYNPKLENKKTIKNCEAEHKLQSEQLEKAEELQYRPKEKY NFGMYYKKKWYELKAKPNTFNVEDEVESLDAAILQNNLLQPILKIQDPRKDNRIDFVGGIRGLKILEELVDKTENGVAFS MYPTAIEEIIKIADNNKVMPPKSTWFEPKLRSGLFIHEI
Specific function: Unknown
COG id: COG4198
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 51409; Mature: 51278
Theoretical pI: Translated: 6.34; Mature: 6.34
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTILKSFRAIRPNKGFECKIAALPYDVVNTDEAREIGGKNPYSFLHIDRAEIDLNKDINP CCHHHHHHHCCCCCCCEEEEEECCCHHCCCCHHHHCCCCCCCEEEEEEHHEEECCCCCCC YDLKVYDKARENLNNMINKELFIKEEKPMLYIYSLNMNGNVQTGIVGCLSIDDYMNNVIK CEEEEHHHHHHHHHHHHCCCEEEECCCCEEEEEEECCCCCCCCCEEEEEEHHHHHHHHHH KHEHTREEKELDRIKHVDTCSAHTGPIFLTYKHEEKLNTIIENCTKNKALYDFVAEDGVR HHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEECHHHHHHHHHHHHCCHHHHHHHHCCCCE HTVWQIDDENTIEEICHIFKAIPSVYIADGHHRAASAVKVGLKRREENENYTGKEEFNYF EEEEEECCCHHHHHHHHHHHHCCCEEEECCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHH LGVLFPHKELKIMDYNRVVKDTLGYTEEEFINKIEEKFIVKPYNPKLENKKTIKNCEAEH HHEEECCCCEEEEHHHHHHHHHHCCCHHHHHHHHHHHEEECCCCCCCCCCHHHHHCCHHH KLQSEQLEKAEELQYRPKEKYNFGMYYKKKWYELKAKPNTFNVEDEVESLDAAILQNNLL HHHHHHHHHHHHHCCCCCCCCCCCCEEEEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHH QPILKIQDPRKDNRIDFVGGIRGLKILEELVDKTENGVAFSMYPTAIEEIIKIADNNKVM HHHHHCCCCCCCCCEEHHHCHHHHHHHHHHHHCCCCCEEEEECHHHHHHHHHHHCCCCCC PPKSTWFEPKLRSGLFIHEI CCCCCCCCHHHHCCEEEECC >Mature Secondary Structure TILKSFRAIRPNKGFECKIAALPYDVVNTDEAREIGGKNPYSFLHIDRAEIDLNKDINP CHHHHHHHCCCCCCCEEEEEECCCHHCCCCHHHHCCCCCCCEEEEEEHHEEECCCCCCC YDLKVYDKARENLNNMINKELFIKEEKPMLYIYSLNMNGNVQTGIVGCLSIDDYMNNVIK CEEEEHHHHHHHHHHHHCCCEEEECCCCEEEEEEECCCCCCCCCEEEEEEHHHHHHHHHH KHEHTREEKELDRIKHVDTCSAHTGPIFLTYKHEEKLNTIIENCTKNKALYDFVAEDGVR HHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEECHHHHHHHHHHHHCCHHHHHHHHCCCCE HTVWQIDDENTIEEICHIFKAIPSVYIADGHHRAASAVKVGLKRREENENYTGKEEFNYF EEEEEECCCHHHHHHHHHHHHCCCEEEECCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHH LGVLFPHKELKIMDYNRVVKDTLGYTEEEFINKIEEKFIVKPYNPKLENKKTIKNCEAEH HHEEECCCCEEEEHHHHHHHHHHCCCHHHHHHHHHHHEEECCCCCCCCCCHHHHHCCHHH KLQSEQLEKAEELQYRPKEKYNFGMYYKKKWYELKAKPNTFNVEDEVESLDAAILQNNLL HHHHHHHHHHHHHCCCCCCCCCCCCEEEEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHH QPILKIQDPRKDNRIDFVGGIRGLKILEELVDKTENGVAFSMYPTAIEEIIKIADNNKVM HHHHHCCCCCCCCCEEHHHCHHHHHHHHHHHHCCCCCEEEEECHHHHHHHHHHHCCCCCC PPKSTWFEPKLRSGLFIHEI CCCCCCCCHHHHCCEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA