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The map label for this gene is ybjE [H]

Identifier: 148379103

GI number: 148379103

Start: 1225072

End: 1225668

Strand: Direct

Name: ybjE [H]

Synonym: CBO1115

Alternate gene names: 148379103

Gene position: 1225072-1225668 (Clockwise)

Preceding gene: 148379102

Following gene: 148379104

Centisome position: 31.52

GC content: 30.65

Gene sequence:

>597_bases
TTGACTTTATTTATGGTTTTATCTGTATTTATAGGAGCTTTATGTGGATATTTTTTTATTCCAGAAAGCTTTATTCCTAA
TATAGAATTTATAAGCACTATAGCTTTAAATTTACTTATCCTATTTGTGGGAATTGATGTTGGAAGTAATAAAAATCTAA
TAAAGGATTTAAAAAGAAATGGGTTGAAAGTACTTTTAATACCACTCTCAATAATAATAGGCAGTCTTACCGGTGGAATA
ATAACTGCAATATTTTTTAAATTATCTATAAAATCAGCCTTATCCATAGCAGCAGGATTTGGATGGTATAGTTTATCTGC
AGTTATGCTTACTAGCTTGGAAAGCGCCAAAATAGGAACCATAGCATTTTTGACGAATGTATTTAGAGAAATAATAGCAG
TAATTACAATACCATTTTTAGCAAAAAAATTAAATCATTTTACAGCTATAGCCCCAGCAGGAGCCACATCTATGGACACA
ACCCTACCTATAATATCAAAAAATACATCTCCAGAGGTAGCCATAGCATCCTTCATAAATGGAGTAATACTAAGTTCTTT
AGTGCCAATGCTAATATCCTTCATATACACCATGTAA

Upstream 100 bases:

>100_bases
AGGACAGGTTTCTATAGCATTTGCAATAACTACAACTATATTTAGTATAATAATCCTTTATATAGTTTCTAAGAGATTTT
TGCAAAAGGGGGAGGAATAA

Downstream 100 bases:

>100_bases
GAAAATTATGACTTAACAATTTTTAAAAATTTAGAGTATACTAATATGCTTTTATTAGATAATAATTAGTAGAGTACAAA
TTACATAAAGTAGTTATTGT

Product: membrane protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 198; Mature: 197

Protein sequence:

>198_residues
MTLFMVLSVFIGALCGYFFIPESFIPNIEFISTIALNLLILFVGIDVGSNKNLIKDLKRNGLKVLLIPLSIIIGSLTGGI
ITAIFFKLSIKSALSIAAGFGWYSLSAVMLTSLESAKIGTIAFLTNVFREIIAVITIPFLAKKLNHFTAIAPAGATSMDT
TLPIISKNTSPEVAIASFINGVILSSLVPMLISFIYTM

Sequences:

>Translated_198_residues
MTLFMVLSVFIGALCGYFFIPESFIPNIEFISTIALNLLILFVGIDVGSNKNLIKDLKRNGLKVLLIPLSIIIGSLTGGI
ITAIFFKLSIKSALSIAAGFGWYSLSAVMLTSLESAKIGTIAFLTNVFREIIAVITIPFLAKKLNHFTAIAPAGATSMDT
TLPIISKNTSPEVAIASFINGVILSSLVPMLISFIYTM
>Mature_197_residues
TLFMVLSVFIGALCGYFFIPESFIPNIEFISTIALNLLILFVGIDVGSNKNLIKDLKRNGLKVLLIPLSIIIGSLTGGII
TAIFFKLSIKSALSIAAGFGWYSLSAVMLTSLESAKIGTIAFLTNVFREIIAVITIPFLAKKLNHFTAIAPAGATSMDTT
LPIISKNTSPEVAIASFINGVILSSLVPMLISFIYTM

Specific function: Unknown

COG id: COG2431

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: To H.influenzae HI_1452 [H]

Homologues:

Organism=Escherichia coli, GI87081795, Length=174, Percent_Identity=38.5057471264368, Blast_Score=108, Evalue=3e-25,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005642
- ProDom:   PD022789 [H]

Pfam domain/function: PF03956 DUF340 [H]

EC number: NA

Molecular weight: Translated: 21226; Mature: 21095

Theoretical pI: Translated: 9.85; Mature: 9.85

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTLFMVLSVFIGALCGYFFIPESFIPNIEFISTIALNLLILFVGIDVGSNKNLIKDLKRN
CHHHHHHHHHHHHHHHHHHCCHHHCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHC
GLKVLLIPLSIIIGSLTGGIITAIFFKLSIKSALSIAAGFGWYSLSAVMLTSLESAKIGT
CCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCHHH
IAFLTNVFREIIAVITIPFLAKKLNHFTAIAPAGATSMDTTLPIISKNTSPEVAIASFIN
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEECCCCCHHHHHHHHH
GVILSSLVPMLISFIYTM
HHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
TLFMVLSVFIGALCGYFFIPESFIPNIEFISTIALNLLILFVGIDVGSNKNLIKDLKRN
HHHHHHHHHHHHHHHHHHCCHHHCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHC
GLKVLLIPLSIIIGSLTGGIITAIFFKLSIKSALSIAAGFGWYSLSAVMLTSLESAKIGT
CCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCHHH
IAFLTNVFREIIAVITIPFLAKKLNHFTAIAPAGATSMDTTLPIISKNTSPEVAIASFIN
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEECCCCCHHHHHHHHH
GVILSSLVPMLISFIYTM
HHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8905232; 9278503 [H]