| Definition | Clostridium botulinum A str. ATCC 3502, complete genome. |
|---|---|
| Accession | NC_009495 |
| Length | 3,886,916 |
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The map label for this gene is metI1 [H]
Identifier: 148379073
GI number: 148379073
Start: 1194478
End: 1195119
Strand: Direct
Name: metI1 [H]
Synonym: CBO1085
Alternate gene names: 148379073
Gene position: 1194478-1195119 (Clockwise)
Preceding gene: 148379072
Following gene: 148379074
Centisome position: 30.73
GC content: 30.22
Gene sequence:
>642_bases ATGTTACAAGATATGTTATTTAAGGCTCTAAAGGAAACTCTATATATGGTTTCTATATCTACTATTTTATCTATATCATT AGGATTTATACCATCTATAATTCTTATAATTACAGACGAAAAAGGATTAAAACCTAATAAAGTAATATATAAATCTTTAG ACTTTGTTGTTAATTTATTAAGATCCTTTCCTTTTATAATTCTTATGGTGGCGATCCTTCCTTTTACAAAGGCTATAGTA GGGAAAACCATTGGAACTACAGCAGCTATAGTGCCTCTTACAATAGCCGCAATACCTTTTGCAACTAGAGTATTGGAATC TGCCATGAAGGAAGTAGATGAAGGAGTAATTGAAGCAGCTAAGTCTTTGGGTGCTAGTGATATTCAAATAATATTCAAAG TAATAATAAAAGAATCTATGCCTTCTATGATTGTGGCTATAACTTTAACTATAATTTCAGTGGTAGCATATTCAGCTATG GCAGGGGCTATAGGTGGAGGTGGACTAGGAGATGTAGCTATTAAGTACGGATATTATAGATTTAAAACAGATATCATGAT ATATACAGTAGTTATATTAATAATTTTGGTTCAGGTAATACAAAGTTTAGGAAATATACTTTACAAGAGATTAGATAAAT AA
Upstream 100 bases:
>100_bases AATGTTCTTGGAAATTTAGTAATTAATGTATCAAAGGAAAATAAAGAAAAAATTTGTGATTATTTATCTTTAAAATCTAT AGTTTGGGAGGTGCAATAAA
Downstream 100 bases:
>100_bases GCATCATATAGAAATTTAAAAAAATATTATTTTAAATTTTAGGAGGAACTAATTATGAATAAAAAAAGATTATTAGGAAT AACATTATCAGTTTTCTTAA
Product: methionine ABC transporter permease
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 213; Mature: 213
Protein sequence:
>213_residues MLQDMLFKALKETLYMVSISTILSISLGFIPSIILIITDEKGLKPNKVIYKSLDFVVNLLRSFPFIILMVAILPFTKAIV GKTIGTTAAIVPLTIAAIPFATRVLESAMKEVDEGVIEAAKSLGASDIQIIFKVIIKESMPSMIVAITLTIISVVAYSAM AGAIGGGGLGDVAIKYGYYRFKTDIMIYTVVILIILVQVIQSLGNILYKRLDK
Sequences:
>Translated_213_residues MLQDMLFKALKETLYMVSISTILSISLGFIPSIILIITDEKGLKPNKVIYKSLDFVVNLLRSFPFIILMVAILPFTKAIV GKTIGTTAAIVPLTIAAIPFATRVLESAMKEVDEGVIEAAKSLGASDIQIIFKVIIKESMPSMIVAITLTIISVVAYSAM AGAIGGGGLGDVAIKYGYYRFKTDIMIYTVVILIILVQVIQSLGNILYKRLDK >Mature_213_residues MLQDMLFKALKETLYMVSISTILSISLGFIPSIILIITDEKGLKPNKVIYKSLDFVVNLLRSFPFIILMVAILPFTKAIV GKTIGTTAAIVPLTIAAIPFATRVLESAMKEVDEGVIEAAKSLGASDIQIIFKVIIKESMPSMIVAITLTIISVVAYSAM AGAIGGGGLGDVAIKYGYYRFKTDIMIYTVVILIILVQVIQSLGNILYKRLDK
Specific function: Part of the binding-protein-dependent transport system for D-methionine. Probably responsible for the translocation of the substrate across the membrane [H]
COG id: COG2011
COG function: function code P; ABC-type metal ion transport system, permease component
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 ABC transmembrane type-1 domain [H]
Homologues:
Organism=Escherichia coli, GI1786397, Length=182, Percent_Identity=41.2087912087912, Blast_Score=134, Evalue=5e-33,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000515 [H]
Pfam domain/function: PF00528 BPD_transp_1 [H]
EC number: NA
Molecular weight: Translated: 23122; Mature: 23122
Theoretical pI: Translated: 9.79; Mature: 9.79
Prosite motif: PS50928 ABC_TM1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 4.2 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 4.2 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLQDMLFKALKETLYMVSISTILSISLGFIPSIILIITDEKGLKPNKVIYKSLDFVVNLL CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEECCCCCCCHHHHHHHHHHHHHHH RSFPFIILMVAILPFTKAIVGKTIGTTAAIVPLTIAAIPFATRVLESAMKEVDEGVIEAA HHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH KSLGASDIQIIFKVIIKESMPSMIVAITLTIISVVAYSAMAGAIGGGGLGDVAIKYGYYR HHCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHH FKTDIMIYTVVILIILVQVIQSLGNILYKRLDK HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MLQDMLFKALKETLYMVSISTILSISLGFIPSIILIITDEKGLKPNKVIYKSLDFVVNLL CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEECCCCCCCHHHHHHHHHHHHHHH RSFPFIILMVAILPFTKAIVGKTIGTTAAIVPLTIAAIPFATRVLESAMKEVDEGVIEAA HHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH KSLGASDIQIIFKVIIKESMPSMIVAITLTIISVVAYSAMAGAIGGGGLGDVAIKYGYYR HHCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHH FKTDIMIYTVVILIILVQVIQSLGNILYKRLDK HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 10952301 [H]