| Definition | Clostridium botulinum A str. ATCC 3502, complete genome. |
|---|---|
| Accession | NC_009495 |
| Length | 3,886,916 |
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The map label for this gene is resE [H]
Identifier: 148379032
GI number: 148379032
Start: 1143046
End: 1144452
Strand: Direct
Name: resE [H]
Synonym: CBO1042
Alternate gene names: 148379032
Gene position: 1143046-1144452 (Clockwise)
Preceding gene: 148379031
Following gene: 148379035
Centisome position: 29.41
GC content: 28.36
Gene sequence:
>1407_bases ATGAAAATGTCTTTAAAGAAAAAACTTTCTTTAGGATTTTTAATTGCGGTTATAGGTTCAATAATAATTGCTAGTTCCAT ATCTAATTATATGATAAATAACAGATTCAATGAATATTTGGTTCAAGAACATAAAAATAAAATAAACCAAATTATAGTGG CAATTGAAGATATGTATAAAGAGGATAAAGGCTTTCAAGCATTAAAGTATGATGAAATAAAAAGATATGCAGTTTTAAAT GAACTTTATATAGAGATAAAAGATAAAAAGGGGAGCAAGATATTTACCTCTGGGGATGACCATCTTAAACATAGAAGTAT GATGAATTCTATGATGGGGCATGGAATGGGTAATATGATGGGGAAAATGAAAAATTTAGATTTAGGGGATTATAAAGAAG AAGAACAATGGCTTAAAAAGAACAATGTGACTTTTGGAAAGATAACTATTGGATATTTTGGTACTTCATATTTAAACAAT GGAGCATTAACATTTAAAAGAACCTTAAATCATTCCTTTATTGTATCTATGGTCATAACCTTTATTTTAGGGCTTATACT GAGCTGGATTTTATCAAAACAACTTTCAAAACCTTTGGTTAAAATAAAAGAAATAGCTAATACAATGAGAATGGGCAATT TAAATATAAGGTCTAATATAAAAAGTAATACGACAGAAATTCAGGAATTATCAAATTCTATAAATTATTTAGCAGAAACA CTACAACAACAGGAGGCTCTTCGTAAAAGATTGACTTCAGATATGGCTCATGAAATAAGAACTCCAATTACAACTTTAAA AACTCATGTTGAGGCAATAATAGATGGCATATGGGAGCCTACAGAGGAAAGATTGCAGGTCTTTTATGAGGAATTAGAGC GATTAACAAATCTTGTGAATAATTTAAGAAATATTTCTAAATTAGAAAAAGCCGAAACAGTTGTAAATAAAACTAACTTA AATATTACAAAGGAAATAGAAAAAGTTGTAGAAACATTTAATCCTTTATATGAAAAAAGCGGTTTTAAAATAGTTACTAA ACTGGAGAAGGATGTATATGGTTTTATAGATAAGGATAAATTAAAGCAAATTATGCATAATCTTTTATCTAATTCACATA AATATTTAAATGAAGATGGATTAGTAAAGGTTTCATTATCAAAGGGAAAAGATAAAATATTTATAAAGGTTGAAGATAAT GGAGAGGGTATTCCAGAGGAGGATTTACCTCATATATTTGAAAGATTTTATAGAAGTGATGTATCAAGGAATAAAACCAC AGGAGGTACAGGTCTTGGTCTTACCATAACAAAAACTTTAGTAGAAGCTCATGGTGGGCATATTAGAGTAGAAAGTAAGA TGGGAGTTGGAACCAAGTTTATTATAGAGATAAAAACTACTCTTTAG
Upstream 100 bases:
>100_bases ATATAAAAAATATAAGACAAAAGATAGAAGATAATCCTAAAGCCCCTAACTATATTACTACTGTATATGGAGTTGGATAC AGATTTGGAGGAAAAAATTA
Downstream 100 bases:
>100_bases ATTTAAGTTTATTGTAAAAATATTTTTATTATTTTGTCCTATAATTTTATAAAGGTTTTATCTTTTTTGTTGCTTTGCTT TTGTTTAAGCATGAATTTTA
Product: sensor histidine kinase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 468; Mature: 468
Protein sequence:
>468_residues MKMSLKKKLSLGFLIAVIGSIIIASSISNYMINNRFNEYLVQEHKNKINQIIVAIEDMYKEDKGFQALKYDEIKRYAVLN ELYIEIKDKKGSKIFTSGDDHLKHRSMMNSMMGHGMGNMMGKMKNLDLGDYKEEEQWLKKNNVTFGKITIGYFGTSYLNN GALTFKRTLNHSFIVSMVITFILGLILSWILSKQLSKPLVKIKEIANTMRMGNLNIRSNIKSNTTEIQELSNSINYLAET LQQQEALRKRLTSDMAHEIRTPITTLKTHVEAIIDGIWEPTEERLQVFYEELERLTNLVNNLRNISKLEKAETVVNKTNL NITKEIEKVVETFNPLYEKSGFKIVTKLEKDVYGFIDKDKLKQIMHNLLSNSHKYLNEDGLVKVSLSKGKDKIFIKVEDN GEGIPEEDLPHIFERFYRSDVSRNKTTGGTGLGLTITKTLVEAHGGHIRVESKMGVGTKFIIEIKTTL
Sequences:
>Translated_468_residues MKMSLKKKLSLGFLIAVIGSIIIASSISNYMINNRFNEYLVQEHKNKINQIIVAIEDMYKEDKGFQALKYDEIKRYAVLN ELYIEIKDKKGSKIFTSGDDHLKHRSMMNSMMGHGMGNMMGKMKNLDLGDYKEEEQWLKKNNVTFGKITIGYFGTSYLNN GALTFKRTLNHSFIVSMVITFILGLILSWILSKQLSKPLVKIKEIANTMRMGNLNIRSNIKSNTTEIQELSNSINYLAET LQQQEALRKRLTSDMAHEIRTPITTLKTHVEAIIDGIWEPTEERLQVFYEELERLTNLVNNLRNISKLEKAETVVNKTNL NITKEIEKVVETFNPLYEKSGFKIVTKLEKDVYGFIDKDKLKQIMHNLLSNSHKYLNEDGLVKVSLSKGKDKIFIKVEDN GEGIPEEDLPHIFERFYRSDVSRNKTTGGTGLGLTITKTLVEAHGGHIRVESKMGVGTKFIIEIKTTL >Mature_468_residues MKMSLKKKLSLGFLIAVIGSIIIASSISNYMINNRFNEYLVQEHKNKINQIIVAIEDMYKEDKGFQALKYDEIKRYAVLN ELYIEIKDKKGSKIFTSGDDHLKHRSMMNSMMGHGMGNMMGKMKNLDLGDYKEEEQWLKKNNVTFGKITIGYFGTSYLNN GALTFKRTLNHSFIVSMVITFILGLILSWILSKQLSKPLVKIKEIANTMRMGNLNIRSNIKSNTTEIQELSNSINYLAET LQQQEALRKRLTSDMAHEIRTPITTLKTHVEAIIDGIWEPTEERLQVFYEELERLTNLVNNLRNISKLEKAETVVNKTNL NITKEIEKVVETFNPLYEKSGFKIVTKLEKDVYGFIDKDKLKQIMHNLLSNSHKYLNEDGLVKVSLSKGKDKIFIKVEDN GEGIPEEDLPHIFERFYRSDVSRNKTTGGTGLGLTITKTLVEAHGGHIRVESKMGVGTKFIIEIKTTL
Specific function: Member of the two-component regulatory system resD/resE involved in the global regulation of aerobic and anaerobic respiration. Probably phosphorylates resD [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Probable) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 PAS (PER-ARNT-SIM) domain [H]
Homologues:
Organism=Escherichia coli, GI1788393, Length=273, Percent_Identity=29.3040293040293, Blast_Score=149, Evalue=3e-37, Organism=Escherichia coli, GI1786783, Length=395, Percent_Identity=27.8481012658228, Blast_Score=130, Evalue=2e-31, Organism=Escherichia coli, GI1790346, Length=268, Percent_Identity=27.6119402985075, Blast_Score=115, Evalue=9e-27, Organism=Escherichia coli, GI1786600, Length=233, Percent_Identity=31.3304721030043, Blast_Score=112, Evalue=6e-26, Organism=Escherichia coli, GI1789149, Length=344, Percent_Identity=27.6162790697674, Blast_Score=108, Evalue=1e-24, Organism=Escherichia coli, GI1787894, Length=294, Percent_Identity=24.8299319727891, Blast_Score=101, Evalue=1e-22, Organism=Escherichia coli, GI1788713, Length=251, Percent_Identity=25.8964143426295, Blast_Score=89, Evalue=5e-19, Organism=Escherichia coli, GI145693157, Length=259, Percent_Identity=22.3938223938224, Blast_Score=88, Evalue=1e-18, Organism=Escherichia coli, GI87082128, Length=299, Percent_Identity=22.742474916388, Blast_Score=87, Evalue=2e-18, Organism=Escherichia coli, GI87081816, Length=261, Percent_Identity=24.1379310344828, Blast_Score=86, Evalue=5e-18, Organism=Escherichia coli, GI1788279, Length=279, Percent_Identity=25.8064516129032, Blast_Score=84, Evalue=2e-17, Organism=Escherichia coli, GI1789403, Length=288, Percent_Identity=25.3472222222222, Blast_Score=83, Evalue=4e-17, Organism=Escherichia coli, GI48994928, Length=218, Percent_Identity=27.5229357798165, Blast_Score=80, Evalue=3e-16, Organism=Escherichia coli, GI1790551, Length=305, Percent_Identity=24.2622950819672, Blast_Score=80, Evalue=3e-16, Organism=Escherichia coli, GI1788549, Length=216, Percent_Identity=26.3888888888889, Blast_Score=79, Evalue=5e-16, Organism=Escherichia coli, GI1790436, Length=214, Percent_Identity=27.5700934579439, Blast_Score=78, Evalue=1e-15, Organism=Escherichia coli, GI1790300, Length=252, Percent_Identity=25.7936507936508, Blast_Score=74, Evalue=2e-14, Organism=Escherichia coli, GI1787374, Length=289, Percent_Identity=21.1072664359862, Blast_Score=73, Evalue=4e-14, Organism=Escherichia coli, GI1790861, Length=385, Percent_Identity=21.8181818181818, Blast_Score=71, Evalue=1e-13, Organism=Escherichia coli, GI1786912, Length=232, Percent_Identity=23.7068965517241, Blast_Score=71, Evalue=1e-13,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003594 - InterPro: IPR003660 - InterPro: IPR000014 - InterPro: IPR013767 - InterPro: IPR004358 - InterPro: IPR003661 - InterPro: IPR005467 - InterPro: IPR009082 [H]
Pfam domain/function: PF00672 HAMP; PF02518 HATPase_c; PF00512 HisKA; PF00989 PAS [H]
EC number: =2.7.13.3 [H]
Molecular weight: Translated: 53574; Mature: 53574
Theoretical pI: Translated: 9.82; Mature: 9.82
Prosite motif: PS50885 HAMP ; PS50109 HIS_KIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.8 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.8 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKMSLKKKLSLGFLIAVIGSIIIASSISNYMINNRFNEYLVQEHKNKINQIIVAIEDMYK CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHH EDKGFQALKYDEIKRYAVLNELYIEIKDKKGSKIFTSGDDHLKHRSMMNSMMGHGMGNMM HCCCCCHHHHHHHHHHHHHHHHHEEEECCCCCEEEECCCHHHHHHHHHHHHHHCCHHHHH GKMKNLDLGDYKEEEQWLKKNNVTFGKITIGYFGTSYLNNGALTFKRTLNHSFIVSMVIT HHHCCCCCCCCCHHHHHHHHCCCEEEEEEEEEHHHHHHCCCCEEEHHHHCHHHHHHHHHH FILGLILSWILSKQLSKPLVKIKEIANTMRMGNLNIRSNIKSNTTEIQELSNSINYLAET HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHCCCCCCHHHHHHHHHHHHHHHHH LQQQEALRKRLTSDMAHEIRTPITTLKTHVEAIIDGIWEPTEERLQVFYEELERLTNLVN HHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHH NLRNISKLEKAETVVNKTNLNITKEIEKVVETFNPLYEKSGFKIVTKLEKDVYGFIDKDK HHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCEEHHHHHHHHHCCCCHHH LKQIMHNLLSNSHKYLNEDGLVKVSLSKGKDKIFIKVEDNGEGIPEEDLPHIFERFYRSD HHHHHHHHHCCCHHHCCCCCEEEEEECCCCCEEEEEEECCCCCCCCCHHHHHHHHHHHHH VSRNKTTGGTGLGLTITKTLVEAHGGHIRVESKMGVGTKFIIEIKTTL CCCCCCCCCCCCCHHHHHHHHHHCCCEEEEECCCCCCEEEEEEEEECC >Mature Secondary Structure MKMSLKKKLSLGFLIAVIGSIIIASSISNYMINNRFNEYLVQEHKNKINQIIVAIEDMYK CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHH EDKGFQALKYDEIKRYAVLNELYIEIKDKKGSKIFTSGDDHLKHRSMMNSMMGHGMGNMM HCCCCCHHHHHHHHHHHHHHHHHEEEECCCCCEEEECCCHHHHHHHHHHHHHHCCHHHHH GKMKNLDLGDYKEEEQWLKKNNVTFGKITIGYFGTSYLNNGALTFKRTLNHSFIVSMVIT HHHCCCCCCCCCHHHHHHHHCCCEEEEEEEEEHHHHHHCCCCEEEHHHHCHHHHHHHHHH FILGLILSWILSKQLSKPLVKIKEIANTMRMGNLNIRSNIKSNTTEIQELSNSINYLAET HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHCCCCCCHHHHHHHHHHHHHHHHH LQQQEALRKRLTSDMAHEIRTPITTLKTHVEAIIDGIWEPTEERLQVFYEELERLTNLVN HHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHH NLRNISKLEKAETVVNKTNLNITKEIEKVVETFNPLYEKSGFKIVTKLEKDVYGFIDKDK HHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCEEHHHHHHHHHCCCCHHH LKQIMHNLLSNSHKYLNEDGLVKVSLSKGKDKIFIKVEDNGEGIPEEDLPHIFERFYRSD HHHHHHHHHCCCHHHCCCCCEEEEEECCCCCEEEEEEECCCCCCCCCHHHHHHHHHHHHH VSRNKTTGGTGLGLTITKTLVEAHGGHIRVESKMGVGTKFIIEIKTTL CCCCCCCCCCCCCHHHHHHHHHHCCCEEEEECCCCCCEEEEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 7934829; 9384377; 8631715 [H]