Definition | Clostridium botulinum A str. ATCC 3502, complete genome. |
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Accession | NC_009495 |
Length | 3,886,916 |
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The map label for this gene is 148378871
Identifier: 148378871
GI number: 148378871
Start: 981828
End: 982634
Strand: Reverse
Name: 148378871
Synonym: CBO0879
Alternate gene names: NA
Gene position: 982634-981828 (Counterclockwise)
Preceding gene: 148378876
Following gene: 148378870
Centisome position: 25.28
GC content: 33.95
Gene sequence:
>807_bases ATGAAAGAAAAGATCACTGAAATGATACGAAACTTTGTTAAGGAATACGAGCAAAAGGATGATATTTCAACCAAATGGGG TGAGCCTTTAGTGGGATTTGCTGATGCTAATCATCCTTACATTTTAAATTTGAAAGAACTTATTACACAAACCCATAAAT TACCTACTGATGTACTTTCCGATGCATCTATTGTAATAGCGTATTTTATTCCATTTACTAAAGAATTGGCTAATACAAAT CGAATTGTTGGAGATATTTCCTCTCCTGAATGGGCACTGGCTTATGAAGAAACCAATGCAATGTTTGTTAAGCTGAATGA ATATATAATATCAGAACTACGCAAAATAGGATATCATGCAGGTATTTCACCAGAAGCTTCTACCTTTGACCAAAAGATAT TAAAAAGCAATTGGTCTCATCGACATTTTGCAAAAGTTGCTGGTCTTGGAACCTTTGGTATCAATAATATGCTTATAACT AAGATTGGATGCTGTGGAAGATATAGCACCATTGTAACCAATCTAGATGTTAAGCCGGATTCACCTCTAGAAGATGAATT TTGCTTATATAAAAAGAATAAAAGCTGCGGTATATGTGTAAAACATTGTCCATCAGGTGCATTGACTTTAGATGGATATG ATAGACATAAGTGTTATGTCGTACTAAGAAAAAATGCAGAATTATATACAGAATTCGGAAGCTCTTACACCAATAAATCT GGTGATCATCCAAACAGTGTAGGTAGTGAAGTATGTGGAAAGTGCGTAGTAAATACACCATGTACCTTTTTTTATAGAAA ACCTTGA
Upstream 100 bases:
>100_bases ATTCTTAGAATTAATAATATATTGGTAAAAGATATCTATTAGAAAAATATAATAATTTTTCAATCCAACAGATTTATAAA AAGAAAGGATATGCTTTAGT
Downstream 100 bases:
>100_bases TTATAATTTAGAAAAATTAACTATACATGTCATATTTAAATATCTGCTATATTCCACTTTCCACCAATGACCGAAACAGT ATATTCGTAAGGTGCTTATT
Product: iron-sulfur cluster-binding protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 268; Mature: 268
Protein sequence:
>268_residues MKEKITEMIRNFVKEYEQKDDISTKWGEPLVGFADANHPYILNLKELITQTHKLPTDVLSDASIVIAYFIPFTKELANTN RIVGDISSPEWALAYEETNAMFVKLNEYIISELRKIGYHAGISPEASTFDQKILKSNWSHRHFAKVAGLGTFGINNMLIT KIGCCGRYSTIVTNLDVKPDSPLEDEFCLYKKNKSCGICVKHCPSGALTLDGYDRHKCYVVLRKNAELYTEFGSSYTNKS GDHPNSVGSEVCGKCVVNTPCTFFYRKP
Sequences:
>Translated_268_residues MKEKITEMIRNFVKEYEQKDDISTKWGEPLVGFADANHPYILNLKELITQTHKLPTDVLSDASIVIAYFIPFTKELANTN RIVGDISSPEWALAYEETNAMFVKLNEYIISELRKIGYHAGISPEASTFDQKILKSNWSHRHFAKVAGLGTFGINNMLIT KIGCCGRYSTIVTNLDVKPDSPLEDEFCLYKKNKSCGICVKHCPSGALTLDGYDRHKCYVVLRKNAELYTEFGSSYTNKS GDHPNSVGSEVCGKCVVNTPCTFFYRKP >Mature_268_residues MKEKITEMIRNFVKEYEQKDDISTKWGEPLVGFADANHPYILNLKELITQTHKLPTDVLSDASIVIAYFIPFTKELANTN RIVGDISSPEWALAYEETNAMFVKLNEYIISELRKIGYHAGISPEASTFDQKILKSNWSHRHFAKVAGLGTFGINNMLIT KIGCCGRYSTIVTNLDVKPDSPLEDEFCLYKKNKSCGICVKHCPSGALTLDGYDRHKCYVVLRKNAELYTEFGSSYTNKS GDHPNSVGSEVCGKCVVNTPCTFFYRKP
Specific function: Unknown
COG id: COG1600
COG function: function code C; Uncharacterized Fe-S protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 30191; Mature: 30191
Theoretical pI: Translated: 7.68; Mature: 7.68
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.7 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 5.2 %Cys+Met (Translated Protein) 3.7 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 5.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKEKITEMIRNFVKEYEQKDDISTKWGEPLVGFADANHPYILNLKELITQTHKLPTDVLS CHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEECCCCCEEEEHHHHHHHHHCCCHHHHC DASIVIAYFIPFTKELANTNRIVGDISSPEWALAYEETNAMFVKLNEYIISELRKIGYHA CCCEEEHHHHHHHHHHCCCCCEEECCCCCCEEEEEECCCEEEEEHHHHHHHHHHHHHHCC GISPEASTFDQKILKSNWSHRHFAKVAGLGTFGINNMLITKIGCCGRYSTIVTNLDVKPD CCCCCHHHHHHHHHHCCCCHHHHHHHHCCCCCCCCCCHHHHHCCCCCCHHEEEECCCCCC SPLEDEFCLYKKNKSCGICVKHCPSGALTLDGYDRHKCYVVLRKNAELYTEFGSSYTNKS CCCCCCEEEEECCCCCCEEEEECCCCCEEECCCCCCEEEEEEECCCHHHHHHCCCCCCCC GDHPNSVGSEVCGKCVVNTPCTFFYRKP CCCCCHHHHHHHCCEEECCCCEEEEECC >Mature Secondary Structure MKEKITEMIRNFVKEYEQKDDISTKWGEPLVGFADANHPYILNLKELITQTHKLPTDVLS CHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEECCCCCEEEEHHHHHHHHHCCCHHHHC DASIVIAYFIPFTKELANTNRIVGDISSPEWALAYEETNAMFVKLNEYIISELRKIGYHA CCCEEEHHHHHHHHHHCCCCCEEECCCCCCEEEEEECCCEEEEEHHHHHHHHHHHHHHCC GISPEASTFDQKILKSNWSHRHFAKVAGLGTFGINNMLITKIGCCGRYSTIVTNLDVKPD CCCCCHHHHHHHHHHCCCCHHHHHHHHCCCCCCCCCCHHHHHCCCCCCHHEEEECCCCCC SPLEDEFCLYKKNKSCGICVKHCPSGALTLDGYDRHKCYVVLRKNAELYTEFGSSYTNKS CCCCCCEEEEECCCCCCEEEEECCCCCEEECCCCCCEEEEEEECCCHHHHHHCCCCCCCC GDHPNSVGSEVCGKCVVNTPCTFFYRKP CCCCCHHHHHHHCCEEECCCCEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA