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The map label for this gene is oxdD [H]

Identifier: 148378856

GI number: 148378856

Start: 969474

End: 970682

Strand: Reverse

Name: oxdD [H]

Synonym: CBO0864

Alternate gene names: 148378856

Gene position: 970682-969474 (Counterclockwise)

Preceding gene: 148378857

Following gene: 148378853

Centisome position: 24.97

GC content: 43.51

Gene sequence:

>1209_bases
ATGTATATTCAAAATCAATATCAAAACTTATGCAATCTACTTATGTCCGGATGTATACCACAGCCTATAAGAGACGGAGC
TGGTGACACTGATATAGGACCACGCGATATTCTTCGAGATCTCGAAAATCCTGACATGCTTGTTCCGCCTTCCACGGATA
CCGGCTTGATTCCTAATCTAAAATTTTCTTTTTCTGATACTAATATGACAATAAGACCGGGTGGATGGTCTCGAGAGATT
ACTGTTAGGGAACTACCAGTAGCGACCACAATGGCAGGAGTTAATATGCGATTGACGCCAGGTGGCGTGCGTGAGGTTCA
CTGGCATCAGCAGTCAGAATGGTCCTATATGCTGAAAGGGCGTGCCCGTATAACAGCGGTAGATGATCGTGGGCGAAATT
TTATTGCCGATATTGGTCCTGGTGATCTTTGGTTCTTTCCCCCACTTTTCCCACATTCCATTCAAGGTTTGGAAGAGGGC
TGCGAATTTTTGCTTCTTTTCGACGATGGAAACTTTTCTGATCTGCGAACATTCTCTCTCTCCGAATTTTTCGCCCATTA
TCCCAAGGATGTGCTGGCGGCTAATTTTGGTGTGACCAAGAACTGCTTCAACAGTCTTCCAGAAGGTCAAGTATATATTT
ATCAGGATACTATCCCGGGTCCTTTGGAAAGTGAAGCAATCGAATCCCCATATGGGACTATTCCCCAAAGCTACAAACAT
AGCTTATTAGCGCAAAAACCAATGACAACATCTGGTGGGAGCGTACGTATTGCAGATACTTCTAACTTTCCAGTTGCCAA
AACCACCGCTGCGGCTTTGGTGGAGATTAAACCCGGTGGAATGAGAGAAATTCATTGGCATCCTAACGACGAGTTTCAAT
ATTTCCTTACCGGACAGTCACGCATGACAGTATTCGCGGATACCGGTGCTTCTCGTACATTTGATTATAGAGCTGGTGAT
GTGGGTTATGTACCAACTGGCTATGGGCATTATGTTCAAAATATCGGTAATGAAACGGTGTGGTTTTTAGAAGCATTTAG
GAGCGATCGATTTAGGAGCATATCACTAAGCCAAATGATGGCTATTACACCTAAGCAGCTTATTACAAGTAATTTGAATG
TGGGACCTGGATTTTTAAATGCGTTGAGTAGGAGTAAGTTCCAATGCTCAGTTGGTCCATGTTTCCACCAGACAGAATGT
TCAAACTAA

Upstream 100 bases:

>100_bases
TAATCACATTACATTTACTCCTTTCATAAAATATAATGTAATTTCAACTAACTCCTAGAAACACTACTATATACATTAAT
AATGATTTGGAGGAATTTTT

Downstream 100 bases:

>100_bases
AGCTTGGCAAAGTAAAACATAAATCCTAGTATATATGAGCCAAAGTAGTATAAAACTTCAAGGACTTTATAATTATTCAT
TAGATGTATATATATTTAAA

Product: oxalate decarboxylase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 402; Mature: 402

Protein sequence:

>402_residues
MYIQNQYQNLCNLLMSGCIPQPIRDGAGDTDIGPRDILRDLENPDMLVPPSTDTGLIPNLKFSFSDTNMTIRPGGWSREI
TVRELPVATTMAGVNMRLTPGGVREVHWHQQSEWSYMLKGRARITAVDDRGRNFIADIGPGDLWFFPPLFPHSIQGLEEG
CEFLLLFDDGNFSDLRTFSLSEFFAHYPKDVLAANFGVTKNCFNSLPEGQVYIYQDTIPGPLESEAIESPYGTIPQSYKH
SLLAQKPMTTSGGSVRIADTSNFPVAKTTAAALVEIKPGGMREIHWHPNDEFQYFLTGQSRMTVFADTGASRTFDYRAGD
VGYVPTGYGHYVQNIGNETVWFLEAFRSDRFRSISLSQMMAITPKQLITSNLNVGPGFLNALSRSKFQCSVGPCFHQTEC
SN

Sequences:

>Translated_402_residues
MYIQNQYQNLCNLLMSGCIPQPIRDGAGDTDIGPRDILRDLENPDMLVPPSTDTGLIPNLKFSFSDTNMTIRPGGWSREI
TVRELPVATTMAGVNMRLTPGGVREVHWHQQSEWSYMLKGRARITAVDDRGRNFIADIGPGDLWFFPPLFPHSIQGLEEG
CEFLLLFDDGNFSDLRTFSLSEFFAHYPKDVLAANFGVTKNCFNSLPEGQVYIYQDTIPGPLESEAIESPYGTIPQSYKH
SLLAQKPMTTSGGSVRIADTSNFPVAKTTAAALVEIKPGGMREIHWHPNDEFQYFLTGQSRMTVFADTGASRTFDYRAGD
VGYVPTGYGHYVQNIGNETVWFLEAFRSDRFRSISLSQMMAITPKQLITSNLNVGPGFLNALSRSKFQCSVGPCFHQTEC
SN
>Mature_402_residues
MYIQNQYQNLCNLLMSGCIPQPIRDGAGDTDIGPRDILRDLENPDMLVPPSTDTGLIPNLKFSFSDTNMTIRPGGWSREI
TVRELPVATTMAGVNMRLTPGGVREVHWHQQSEWSYMLKGRARITAVDDRGRNFIADIGPGDLWFFPPLFPHSIQGLEEG
CEFLLLFDDGNFSDLRTFSLSEFFAHYPKDVLAANFGVTKNCFNSLPEGQVYIYQDTIPGPLESEAIESPYGTIPQSYKH
SLLAQKPMTTSGGSVRIADTSNFPVAKTTAAALVEIKPGGMREIHWHPNDEFQYFLTGQSRMTVFADTGASRTFDYRAGD
VGYVPTGYGHYVQNIGNETVWFLEAFRSDRFRSISLSQMMAITPKQLITSNLNVGPGFLNALSRSKFQCSVGPCFHQTEC
SN

Specific function: Converts oxalate to formate and CO(2) [H]

COG id: COG2140

COG function: function code GR; Thermophilic glucose-6-phosphate isomerase and related metalloenzymes

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: To B.subtilis oxdC [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR017774
- InterPro:   IPR006045
- InterPro:   IPR011051
- InterPro:   IPR014710 [H]

Pfam domain/function: PF00190 Cupin_1 [H]

EC number: =4.1.1.2 [H]

Molecular weight: Translated: 44803; Mature: 44803

Theoretical pI: Translated: 5.39; Mature: 5.39

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
4.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MYIQNQYQNLCNLLMSGCIPQPIRDGAGDTDIGPRDILRDLENPDMLVPPSTDTGLIPNL
CCCCHHHHHHHHHHHHCCCCCHHHCCCCCCCCCHHHHHHHCCCCCEEECCCCCCCCCCCE
KFSFSDTNMTIRPGGWSREITVRELPVATTMAGVNMRLTPGGVREVHWHQQSEWSYMLKG
EEEECCCEEEECCCCCCCEEEEEECCCEEEECCCEEEECCCCCEEEECCCCCCCEEEEEC
RARITAVDDRGRNFIADIGPGDLWFFPPLFPHSIQGLEEGCEFLLLFDDGNFSDLRTFSL
CEEEEEECCCCCEEEEECCCCCEEECCCCCCHHHHHHHCCCEEEEEECCCCCCHHHHHHH
SEFFAHYPKDVLAANFGVTKNCFNSLPEGQVYIYQDTIPGPLESEAIESPYGTIPQSYKH
HHHHHHCCHHHHHHCCCCCHHHHHCCCCCEEEEEECCCCCCCCHHHHCCCCCCCCHHHHH
SLLAQKPMTTSGGSVRIADTSNFPVAKTTAAALVEIKPGGMREIHWHPNDEFQYFLTGQS
HHHHCCCCCCCCCEEEEEECCCCCCCCCCEEEEEEECCCCCEEEEECCCCCEEEEEECCC
RMTVFADTGASRTFDYRAGDVGYVPTGYGHYVQNIGNETVWFLEAFRSDRFRSISLSQMM
EEEEEEECCCCCEEECCCCCCCCCCCCHHHHHHHCCCCCEEHHHHHHCCCCEEECHHHHH
AITPKQLITSNLNVGPGFLNALSRSKFQCSVGPCFHQTECSN
HCCHHHHHHCCCCCCCHHHHHHHCCCEEECCCCCCCCCCCCC
>Mature Secondary Structure
MYIQNQYQNLCNLLMSGCIPQPIRDGAGDTDIGPRDILRDLENPDMLVPPSTDTGLIPNL
CCCCHHHHHHHHHHHHCCCCCHHHCCCCCCCCCHHHHHHHCCCCCEEECCCCCCCCCCCE
KFSFSDTNMTIRPGGWSREITVRELPVATTMAGVNMRLTPGGVREVHWHQQSEWSYMLKG
EEEECCCEEEECCCCCCCEEEEEECCCEEEECCCEEEECCCCCEEEECCCCCCCEEEEEC
RARITAVDDRGRNFIADIGPGDLWFFPPLFPHSIQGLEEGCEFLLLFDDGNFSDLRTFSL
CEEEEEECCCCCEEEEECCCCCEEECCCCCCHHHHHHHCCCEEEEEECCCCCCHHHHHHH
SEFFAHYPKDVLAANFGVTKNCFNSLPEGQVYIYQDTIPGPLESEAIESPYGTIPQSYKH
HHHHHHCCHHHHHHCCCCCHHHHHCCCCCEEEEEECCCCCCCCHHHHCCCCCCCCHHHHH
SLLAQKPMTTSGGSVRIADTSNFPVAKTTAAALVEIKPGGMREIHWHPNDEFQYFLTGQS
HHHHCCCCCCCCCEEEEEECCCCCCCCCCEEEEEEECCCCCEEEEECCCCCEEEEEECCC
RMTVFADTGASRTFDYRAGDVGYVPTGYGHYVQNIGNETVWFLEAFRSDRFRSISLSQMM
EEEEEEECCCCCEEECCCCCCCCCCCCHHHHHHHCCCCCEEHHHHHHCCCCEEECHHHHH
AITPKQLITSNLNVGPGFLNALSRSKFQCSVGPCFHQTECSN
HCCHHHHHHCCCCCCCHHHHHHHCCCEEECCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9384377; 11546787 [H]