Definition | Clostridium botulinum A str. ATCC 3502, complete genome. |
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Accession | NC_009495 |
Length | 3,886,916 |
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The map label for this gene is 148378414
Identifier: 148378414
GI number: 148378414
Start: 483596
End: 484957
Strand: Reverse
Name: 148378414
Synonym: CBO0411
Alternate gene names: NA
Gene position: 484957-483596 (Counterclockwise)
Preceding gene: 148378418
Following gene: 148378413
Centisome position: 12.48
GC content: 27.24
Gene sequence:
>1362_bases GTGTGTAAAATTAATATAAAATCTTTTTTCAGCATAATAATTTCAAAAATGGTTCTAAAGCTGTCTAAAACACTTTTTAA AGGTGGAACCAACTTCCCGGGGAAAGTTGCTTTAAAATTAGATAAAAAAATATTAAAAACAGTAGCTAAGGATTACAAAG TAATCCTTGTAACAGGAACTAATGGTAAAACCACCACAACTAGTATGATATACAATATGATTAAAGACAGTAATAAATTT GTAATATCCAACAGTACTGGTGCAAACATGTTTCCAGGCATAGTAGCTTGTTTTGTAGAAAACTTTTCTTTCAATAATAA AGAAGAAAAATATGCGGTTATAGAAGTAGATGAAGCCAATGTAAAATTTATTACAGAATATGTATCTCCAGAAATAATAA CTATAACAAACTTATTTAGAGATCAACTAGATAGGTATGGAGAAGTTTATACTACTTTGAAAAAAATATTAGAGGGTATT GAAAAATCTCCAAATTCAAAACTTATATTAAATGGGGACGAGTCACTTTTAGGTGATTTAAATAATTCTCTTCCTAATAA AGTTCTATATTATGGATTTTCACATTTTAAGAATGCTGATACTGTAATAGATGTAAATGCAGATTCAAAATTTTGTAAAA AGTGTAAGCATCCTTATTCTTATGAGTTTTTAACTTATAATCATTTAGGAAGCTACTACTGTGAAAACTGTGGATATAAA AGACCTAACATAACCTTCTCTTTAGATGAAGTAGAAGATTTAACCCCTGAGGGTTCTTTAGTTATAATAGACAATCAAGA ATATTACATAAATCAACCTGGACTATACAATGTTTATAATGCCCTATGTGCTTATTCTATGGCTAAAACATTAGGTATAG AAAAATCTATCATATTTAATTCATTAAAGAGTCAAAAGAGTAGTTTTGGTAGACAAGAAAGTATAAATATAGAAGGTAAA GATGTTAAAATAATACTAGTTAAAAATCCTGCTGGATATGACCAAGCTATAAATACTATAGTTTTAGACAAGAAAAAATT AAATTTAGCCCTACTTTTAAATGATAACTATGCAGATGGTAGAGATGTATCTTGGATATGGGATGTAAAGTTTGAAAAAT TAAAATCTCTAGATATAGATAATATATTAATCTCTGGTGTAAGATTATACGACATGGCTATAAGATTAAAAATAGCAGGT CTTCCAAATGAAAAATTTAAAATTTCTCAAAATCATGATGATTTATTAGAGGATATAAAAAGTTGCAGAGAAGAGACCGT ATATATTTTGGCTACATATACTGCTATGACATCTTTTAGAAAATTTCTAAATTCTAAAGGATATATTAAAAAATTGTGGT AA
Upstream 100 bases:
>100_bases AAAAATTAAATTATGATTTTATTAATATTAATGTAAAATAGTCAAAATTATATTATAATAGTTAGTTGTAATCTTATTTA TTTAAAAATTTAAAAAGGAA
Downstream 100 bases:
>100_bases TTAATATATAAAGCAATTAAATTAAGTATTCTAACTAATATAAAGAAGGTGAAATACATGGAACTTAATATATGTCATCT ATACCCCGATTTATTAAATG
Product: UDP-N-acetylmuramyl tripeptide synthetase-like protein
Products: NA
Alternate protein names: Mur Ligase Family Protein; UDP-N-Acetylmuramyl Tripeptide Synthetase; Mur Ligase; Ligase; UDP-N-Acetylmuramoylalanine-D-Glutamate Ligase; Mur Ligase Middle Domain Protein; Conserved Domain Protein; UDP-N-Acetylmuramyl Tripeptide Synthase-Like Protein; UDP-N-Acetylmuramyl Tripeptide Synthetase MurC; Peptide Ligase; UDP-N-Acetylmuramyl Tripeptide Synthetase Like; Murein Ligase; UDP-N-Acetylmuramoyl-L-Alanyl-D-Glutamate-Lysine Ligase; Udp-N-Acetylmuramyl Tripeptide Synthetase; Cell Wall Biosynthesis Protein Mur Ligase Family; UDP-N-Acetylmuramyl Tripeptide Synthetase Related Protein; Mur Ligase Middle Domain-Containing Protein; UDP-N-Acetylmuramyl Peptide Synthetase
Number of amino acids: Translated: 453; Mature: 453
Protein sequence:
>453_residues MCKINIKSFFSIIISKMVLKLSKTLFKGGTNFPGKVALKLDKKILKTVAKDYKVILVTGTNGKTTTTSMIYNMIKDSNKF VISNSTGANMFPGIVACFVENFSFNNKEEKYAVIEVDEANVKFITEYVSPEIITITNLFRDQLDRYGEVYTTLKKILEGI EKSPNSKLILNGDESLLGDLNNSLPNKVLYYGFSHFKNADTVIDVNADSKFCKKCKHPYSYEFLTYNHLGSYYCENCGYK RPNITFSLDEVEDLTPEGSLVIIDNQEYYINQPGLYNVYNALCAYSMAKTLGIEKSIIFNSLKSQKSSFGRQESINIEGK DVKIILVKNPAGYDQAINTIVLDKKKLNLALLLNDNYADGRDVSWIWDVKFEKLKSLDIDNILISGVRLYDMAIRLKIAG LPNEKFKISQNHDDLLEDIKSCREETVYILATYTAMTSFRKFLNSKGYIKKLW
Sequences:
>Translated_453_residues MCKINIKSFFSIIISKMVLKLSKTLFKGGTNFPGKVALKLDKKILKTVAKDYKVILVTGTNGKTTTTSMIYNMIKDSNKF VISNSTGANMFPGIVACFVENFSFNNKEEKYAVIEVDEANVKFITEYVSPEIITITNLFRDQLDRYGEVYTTLKKILEGI EKSPNSKLILNGDESLLGDLNNSLPNKVLYYGFSHFKNADTVIDVNADSKFCKKCKHPYSYEFLTYNHLGSYYCENCGYK RPNITFSLDEVEDLTPEGSLVIIDNQEYYINQPGLYNVYNALCAYSMAKTLGIEKSIIFNSLKSQKSSFGRQESINIEGK DVKIILVKNPAGYDQAINTIVLDKKKLNLALLLNDNYADGRDVSWIWDVKFEKLKSLDIDNILISGVRLYDMAIRLKIAG LPNEKFKISQNHDDLLEDIKSCREETVYILATYTAMTSFRKFLNSKGYIKKLW >Mature_453_residues MCKINIKSFFSIIISKMVLKLSKTLFKGGTNFPGKVALKLDKKILKTVAKDYKVILVTGTNGKTTTTSMIYNMIKDSNKF VISNSTGANMFPGIVACFVENFSFNNKEEKYAVIEVDEANVKFITEYVSPEIITITNLFRDQLDRYGEVYTTLKKILEGI EKSPNSKLILNGDESLLGDLNNSLPNKVLYYGFSHFKNADTVIDVNADSKFCKKCKHPYSYEFLTYNHLGSYYCENCGYK RPNITFSLDEVEDLTPEGSLVIIDNQEYYINQPGLYNVYNALCAYSMAKTLGIEKSIIFNSLKSQKSSFGRQESINIEGK DVKIILVKNPAGYDQAINTIVLDKKKLNLALLLNDNYADGRDVSWIWDVKFEKLKSLDIDNILISGVRLYDMAIRLKIAG LPNEKFKISQNHDDLLEDIKSCREETVYILATYTAMTSFRKFLNSKGYIKKLW
Specific function: Unknown
COG id: COG0769
COG function: function code M; UDP-N-acetylmuramyl tripeptide synthase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 51526; Mature: 51526
Theoretical pI: Translated: 8.84; Mature: 8.84
Prosite motif: PS01011 FOLYLPOLYGLU_SYNT_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MCKINIKSFFSIIISKMVLKLSKTLFKGGTNFPGKVALKLDKKILKTVAKDYKVILVTGT CEEEEHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEHHHHHHHHHHCCCEEEEEECC NGKTTTTSMIYNMIKDSNKFVISNSTGANMFPGIVACFVENFSFNNKEEKYAVIEVDEAN CCCCHHHHHHHHHHCCCCEEEEECCCCCCHHHHHHHHHHHHCCCCCCCCEEEEEEECCCC VKFITEYVSPEIITITNLFRDQLDRYGEVYTTLKKILEGIEKSPNSKLILNGDESLLGDL CEEEEHHCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCHHHHHHH NNSLPNKVLYYGFSHFKNADTVIDVNADSKFCKKCKHPYSYEFLTYNHLGSYYCENCGYK HCCCCCCEEEECHHHCCCCCEEEEECCCHHHHHHCCCCCCEEEEEEHHHHHHHHHHCCCC RPNITFSLDEVEDLTPEGSLVIIDNQEYYINQPGLYNVYNALCAYSMAKTLGIEKSIIFN CCCEEEEHHHHHHCCCCCCEEEEECCEEEECCCCHHHHHHHHHHHHHHHHHCCHHHHHHH SLKSQKSSFGRQESINIEGKDVKIILVKNPAGYDQAINTIVLDKKKLNLALLLNDNYADG HHHHHHHHCCCCCCCCCCCCCEEEEEEECCCCHHHHHHEEEEECCCCEEEEEEECCCCCC RDVSWIWDVKFEKLKSLDIDNILISGVRLYDMAIRLKIAGLPNEKFKISQNHDDLLEDIK CCCEEEECCCHHHHHCCCCCHHHHCCEEEEEEEEEEEEECCCCCCEEECCCHHHHHHHHH SCREETVYILATYTAMTSFRKFLNSKGYIKKLW HHHHCEEEEEEEHHHHHHHHHHHCCCCCEEECC >Mature Secondary Structure MCKINIKSFFSIIISKMVLKLSKTLFKGGTNFPGKVALKLDKKILKTVAKDYKVILVTGT CEEEEHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEHHHHHHHHHHCCCEEEEEECC NGKTTTTSMIYNMIKDSNKFVISNSTGANMFPGIVACFVENFSFNNKEEKYAVIEVDEAN CCCCHHHHHHHHHHCCCCEEEEECCCCCCHHHHHHHHHHHHCCCCCCCCEEEEEEECCCC VKFITEYVSPEIITITNLFRDQLDRYGEVYTTLKKILEGIEKSPNSKLILNGDESLLGDL CEEEEHHCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCHHHHHHH NNSLPNKVLYYGFSHFKNADTVIDVNADSKFCKKCKHPYSYEFLTYNHLGSYYCENCGYK HCCCCCCEEEECHHHCCCCCEEEEECCCHHHHHHCCCCCCEEEEEEHHHHHHHHHHCCCC RPNITFSLDEVEDLTPEGSLVIIDNQEYYINQPGLYNVYNALCAYSMAKTLGIEKSIIFN CCCEEEEHHHHHHCCCCCCEEEEECCEEEECCCCHHHHHHHHHHHHHHHHHCCHHHHHHH SLKSQKSSFGRQESINIEGKDVKIILVKNPAGYDQAINTIVLDKKKLNLALLLNDNYADG HHHHHHHHCCCCCCCCCCCCCEEEEEEECCCCHHHHHHEEEEECCCCEEEEEEECCCCCC RDVSWIWDVKFEKLKSLDIDNILISGVRLYDMAIRLKIAGLPNEKFKISQNHDDLLEDIK CCCEEEECCCHHHHHCCCCCHHHHCCEEEEEEEEEEEEECCCCCCEEECCCHHHHHHHHH SCREETVYILATYTAMTSFRKFLNSKGYIKKLW HHHHCEEEEEEEHHHHHHHHHHHCCCCCEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA