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The map label for this gene is yibP [H]

Identifier: 148360886

GI number: 148360886

Start: 590817

End: 591959

Strand: Reverse

Name: yibP [H]

Synonym: LPC_2846

Alternate gene names: 148360886

Gene position: 591959-590817 (Counterclockwise)

Preceding gene: 148360885

Following gene: 148360887

Centisome position: 16.55

GC content: 38.32

Gene sequence:

>1143_bases
ATGCGCATGTCTAGCCTATCCAACTATTTGTCCAATGCTCCTCTTGGTTTGGCACTTATGGTCATTCTATTTTTTTGTAA
TGGCCTTGAGGCAAAAACTGCTCCAAATTCTATAACTCAAGCACAAACCAAACTAAAACAGTTAGATGCCAAGATTAACA
AATTAAAGCAAGTTTTAGCCAATGCACAGGATAAACGGACTGTACTAAACCAAGAGCTGGGCAGCACAGAAAAACAAATT
GGAGAAGGAATACGCAAGCTAAGAATCATACAAGCAAATATGTCCGCAAAAGAAAAAAGCATTGCCGAGCTGCAAGGAAA
AATAAATCACTTAAATGAACGATTGCAAACTCAGCAGGAAATGCTGGCAAATCATGTCAGGGCGCGTTATCAGATGGGGG
AATACCAACCTTTGAAATGGTTGATTAACCAAGATGAGCCTTTTAAGATCAACCGAATTTTAACCTATTATCAGTATATA
ATAAGATCACGTCAGCAGTTAATTGATGAAATTGCTCGAACCCGACAAAATCTTAACGACAGTAAAACCAAGCTTGGAAA
TGAACTTGCAGAAAACAAGCAGCTACAATTTAAATTGTCACAAAATCAAAAACAGCTAGAGCAAAATAAAAGATACCATA
GCACCCTGATTCAATCCATTGATAATGACATTCAAAATAATCAACAATCATTAAAAGATTTTCAAAAAGATAGAGACAAC
TTATCTCATCTCATGAAGTCATTATCTCAACAAAGTGTAATTCAAAGCGGCAAACCGTTCACGGGAATGCGCAAAAAATT
GCCGTTACCTGTCCAAACCACCCGTAGATCTTTACGCAGAATGAATCAAGGAGTGACATTTTTTGCCGATGAAGGCTCCA
TAGTTACTGCCGTTTACCCAGGGAAAGTTGTGTTTAGTGATTGGCTAAAAGGTTATGGTTTGCTTCTGATTATTGACCAT
GGCCAAGGGTTTATGACTTTATACGCACACAATCAATCTCTCTTCAAACGCAAAGGACAAATCGTCCAACAAAACGAGCA
AGTCGCAAGTGTAGGCCATACCGGTGGAATTAAGCAAAACGGTCTATACTTTGAGATAAGACAAAGAGGAAAAGCGGTCA
ATCCGTTAGACTGGTTGTCTTAA

Upstream 100 bases:

>100_bases
GCTGAAGGAAGTTTAATCGATATAGCACCTTCTTTACTTGCATTATTAGGGATAACTCCGCCTCCGGAAATGACTGGTCG
TATCCTTCTGGAAAAAAACC

Downstream 100 bases:

>100_bases
AGCTTAGCCGCTGGCATTTAAATTGCATAAAAAAATACGCAGGTGGCTAATTTCATGGCCTTGCATCTGAGGAGATCGCT
ATGGTTATTAAGAAACTTTT

Product: membrane-bound metallopeptidase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 380; Mature: 380

Protein sequence:

>380_residues
MRMSSLSNYLSNAPLGLALMVILFFCNGLEAKTAPNSITQAQTKLKQLDAKINKLKQVLANAQDKRTVLNQELGSTEKQI
GEGIRKLRIIQANMSAKEKSIAELQGKINHLNERLQTQQEMLANHVRARYQMGEYQPLKWLINQDEPFKINRILTYYQYI
IRSRQQLIDEIARTRQNLNDSKTKLGNELAENKQLQFKLSQNQKQLEQNKRYHSTLIQSIDNDIQNNQQSLKDFQKDRDN
LSHLMKSLSQQSVIQSGKPFTGMRKKLPLPVQTTRRSLRRMNQGVTFFADEGSIVTAVYPGKVVFSDWLKGYGLLLIIDH
GQGFMTLYAHNQSLFKRKGQIVQQNEQVASVGHTGGIKQNGLYFEIRQRGKAVNPLDWLS

Sequences:

>Translated_380_residues
MRMSSLSNYLSNAPLGLALMVILFFCNGLEAKTAPNSITQAQTKLKQLDAKINKLKQVLANAQDKRTVLNQELGSTEKQI
GEGIRKLRIIQANMSAKEKSIAELQGKINHLNERLQTQQEMLANHVRARYQMGEYQPLKWLINQDEPFKINRILTYYQYI
IRSRQQLIDEIARTRQNLNDSKTKLGNELAENKQLQFKLSQNQKQLEQNKRYHSTLIQSIDNDIQNNQQSLKDFQKDRDN
LSHLMKSLSQQSVIQSGKPFTGMRKKLPLPVQTTRRSLRRMNQGVTFFADEGSIVTAVYPGKVVFSDWLKGYGLLLIIDH
GQGFMTLYAHNQSLFKRKGQIVQQNEQVASVGHTGGIKQNGLYFEIRQRGKAVNPLDWLS
>Mature_380_residues
MRMSSLSNYLSNAPLGLALMVILFFCNGLEAKTAPNSITQAQTKLKQLDAKINKLKQVLANAQDKRTVLNQELGSTEKQI
GEGIRKLRIIQANMSAKEKSIAELQGKINHLNERLQTQQEMLANHVRARYQMGEYQPLKWLINQDEPFKINRILTYYQYI
IRSRQQLIDEIARTRQNLNDSKTKLGNELAENKQLQFKLSQNQKQLEQNKRYHSTLIQSIDNDIQNNQQSLKDFQKDRDN
LSHLMKSLSQQSVIQSGKPFTGMRKKLPLPVQTTRRSLRRMNQGVTFFADEGSIVTAVYPGKVVFSDWLKGYGLLLIIDH
GQGFMTLYAHNQSLFKRKGQIVQQNEQVASVGHTGGIKQNGLYFEIRQRGKAVNPLDWLS

Specific function: Unknown

COG id: COG4942

COG function: function code D; Membrane-bound metallopeptidase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: To H.influenzae HI_0756 [H]

Homologues:

Organism=Escherichia coli, GI87082297, Length=384, Percent_Identity=26.8229166666667, Blast_Score=145, Evalue=4e-36,
Organism=Escherichia coli, GI1789099, Length=99, Percent_Identity=38.3838383838384, Blast_Score=77, Evalue=2e-15,
Organism=Escherichia coli, GI87082174, Length=99, Percent_Identity=36.3636363636364, Blast_Score=72, Evalue=6e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011055
- InterPro:   IPR016047
- InterPro:   IPR002886 [H]

Pfam domain/function: PF01551 Peptidase_M23 [H]

EC number: NA

Molecular weight: Translated: 43587; Mature: 43587

Theoretical pI: Translated: 10.60; Mature: 10.60

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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CCEEEEHHCCCCCCCHHCCC
>Mature Secondary Structure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CCEEEEHHCCCCCCCHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8041620; 9278503 [H]