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The map label for this gene is trbJ

Identifier: 148360844

GI number: 148360844

Start: 626815

End: 627555

Strand: Direct

Name: trbJ

Synonym: LPC_2804

Alternate gene names: NA

Gene position: 626815-627555 (Clockwise)

Preceding gene: 148360845

Following gene: 148360843

Centisome position: 17.53

GC content: 41.3

Gene sequence:

>741_bases
ATGAAATTTAGAATCATGCTTATTTATTTATGGACACTACATGTTTTCGCCAGCGGTGCGCCCGTATTTGATTTTGCCAA
TTGGATTGAAAATGGAAAAATCATACTGAATCAGGTGAGTCAGTATAAAACTCAGATCGATCAATACAACAATCAGCTGC
AGCAATACCAAAATATGTTAGAGAACACTAAGTCGCTCACTTCCTTCCAGTGGGATAATGCCAACTCTGTCATTAATAAT
CTGCTTGAATCGACTAATACAATTGATTATTACAAGCAGGAAGCAGGCAGCCTTCAAGGTTATCTGGACCGATTTCAGAG
CCAGGAATACTATCAGAAAACTCCTTGTTTTAATGGTAATGGTCATTGCTCACCCGAAGAACTCAGGAAAATCAAACAAA
GTAGACTCTCAACTTCTGTTGCCGAAAAGCGTGCTAATGATGCCATGCTCAAAGGGATTGATAAGCAACAACAGAGCTTG
AAAGATGACTCAGAAAAACTACGGGTCTTGCAATCTCAGGCGCAAAGTGCCGTTGGGCAAAAGCAAGCACTACAGGCTGC
TTCACAATTAGCCAGCAATCAATCACATCAATTACTTCAAATCAGAGGGCTTTTATTAGCACAACAAAACGCGCAGGCGG
TAAAAGATGCGGCAAACGCCAATAAAGAGGCCATACAGGCCGCGGGTGATGAGCAATTTCGAGCGGGTACGTATCATAAA
AGTTCAGGTAAAAAATGGTAA

Upstream 100 bases:

>100_bases
TAATGTCCGTCCGGGTTACCGTTTCAACATCATTGTAGTGAAAGATTTAACTTTTAAACAACTTTATAGACAGTTTGCTT
ATTGATACAGGAGGAGTGCA

Downstream 100 bases:

>100_bases
TTCAGTCATAACGACAAGGAGAAGAAATGAAACGCTTAAGTTTATCCATCATGGTGTTCGCTTGTTTGCTTTCAGGCTGT
GAAAGTACAGAAACCAAAGC

Product: conjugal transfer protein TrbJ

Products: NA

Alternate protein names: TrbJ Protein Of DNA Transfer System; Conjugative Transfer Protein TrbJ; Conjugal Transfer Protein; TrbJ Protein; Mating Pair Formation Protein

Number of amino acids: Translated: 246; Mature: 246

Protein sequence:

>246_residues
MKFRIMLIYLWTLHVFASGAPVFDFANWIENGKIILNQVSQYKTQIDQYNNQLQQYQNMLENTKSLTSFQWDNANSVINN
LLESTNTIDYYKQEAGSLQGYLDRFQSQEYYQKTPCFNGNGHCSPEELRKIKQSRLSTSVAEKRANDAMLKGIDKQQQSL
KDDSEKLRVLQSQAQSAVGQKQALQAASQLASNQSHQLLQIRGLLLAQQNAQAVKDAANANKEAIQAAGDEQFRAGTYHK
SSGKKW

Sequences:

>Translated_246_residues
MKFRIMLIYLWTLHVFASGAPVFDFANWIENGKIILNQVSQYKTQIDQYNNQLQQYQNMLENTKSLTSFQWDNANSVINN
LLESTNTIDYYKQEAGSLQGYLDRFQSQEYYQKTPCFNGNGHCSPEELRKIKQSRLSTSVAEKRANDAMLKGIDKQQQSL
KDDSEKLRVLQSQAQSAVGQKQALQAASQLASNQSHQLLQIRGLLLAQQNAQAVKDAANANKEAIQAAGDEQFRAGTYHK
SSGKKW
>Mature_246_residues
MKFRIMLIYLWTLHVFASGAPVFDFANWIENGKIILNQVSQYKTQIDQYNNQLQQYQNMLENTKSLTSFQWDNANSVINN
LLESTNTIDYYKQEAGSLQGYLDRFQSQEYYQKTPCFNGNGHCSPEELRKIKQSRLSTSVAEKRANDAMLKGIDKQQQSL
KDDSEKLRVLQSQAQSAVGQKQALQAASQLASNQSHQLLQIRGLLLAQQNAQAVKDAANANKEAIQAAGDEQFRAGTYHK
SSGKKW

Specific function: Unknown

COG id: COG5314

COG function: function code U; Conjugal transfer/entry exclusion protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 27907; Mature: 27907

Theoretical pI: Translated: 9.40; Mature: 9.40

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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CCCCCC
>Mature Secondary Structure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CCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA