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The map label for this gene is trbL [H]

Identifier: 148360842

GI number: 148360842

Start: 627799

End: 629196

Strand: Direct

Name: trbL [H]

Synonym: LPC_2802

Alternate gene names: 148360842

Gene position: 627799-629196 (Clockwise)

Preceding gene: 148360843

Following gene: 148360841

Centisome position: 17.55

GC content: 44.35

Gene sequence:

>1398_bases
ATGAATAAAAAGACAACCACCTCTTTACTCATACTCTGTTTGCTAGGCTTTTCTGTATGCTGTCATGCCCAGGGCCATGG
TATAGACAGCAGAGATTTGCTAGACAATATCTTATATCGTTTTTCCAGCACTGCCTCGATGTGGAGCCAAACTATTTTAA
GTTATGCTCGTTACCTTTTTTGGTCTTTGGCCACCATCAGCATGGTATGGACTTATGGTCTCATGGCTTTGCGAAAAGCA
GACATTCAAGAGTTTTTGGCAGAAACCGTAAAATTTTTAGTGGTTGTCGGTTTTTTCTATTGGATTTTAGATAATGGGCC
TGCGATTGCAACTGCAATCATGGATTCTATGCGACTGCTCGCTGCAAAAGCTTCTGGAATTAACGAACATGTGTCGCCTT
CTGACATTGTGGATGTGGGGTTTGATATTGTATCAAAAGCAATCGACAGCTCATCAATCTGGTCACCGGCTGCAACGACG
GTAGGATTAATTGTTGCTGGGCTTATTCTGATTATATTGGCGTTGGTCAGTATTAATATGCTCATTATCCTGATTACAGC
CTGGATCTTGACTTATGGTGGCATCATTTTATTAGGTTTTGGCGGCGGACGCTGGACACAGGATATTGCGATTAACTATT
ACAAAACAGTACTAGGGATCGCATTACAAGCCTTTGCCATGATTTTGATTATCGGCATAGGAAAGTCTTTTGTAGATCAA
TATTATGCGGCAATGTCAGAAAACATCATGCTAAAAGAAATGTTTGTCATGATGGTTGTTGCCGTACTTTTGTTGGTACT
TATCAATAAAATTCCCCCTGTTTTATCCGGCATCGTTTCAGGTGGAGGATCAGGTGGCGGTGGTGGACTTGGTCTTGGAG
GCGCGTTAGGGGCTGCGGGAATTGCAGGAACAGCCTTAGCAGGCGCTGCGGGTGCTGCAGCTGTGCAGAGTGCTGGGGGA
TTATCCGCTTTACAGGCTGCATTCAAGGCTGCTTCTCATAGTATCGGCGCAAGTGGCGCTGGCTCCGTGTCAGGAGATAG
CCCAGGCTCAAAACAAGGTAGTTTGGCTCAGGCCATGGGACAAGCTTCTAAATTTGCTGGTTCCTTTGGTTCACATTTAG
CTTCTGGGGCGTTTGATGTCGCCCGTGAAAAAGCAGCAAGCATGAAAGATGCTTTTTCTGCAAAAGCGGCTGATACCACA
GGCGGTAAAATTGCTGATGCCATTCATCAGCGCATATCTTCCAATGCTGAATCGCCAACTATTAATCAACAGGTATCCGA
GTCTCAAAATGTCACTTCTATGGGTGCTCCAGAAGGCAGTTTTAGTTCATGTAACATAAACAGTGATGATGAGATCAGTC
AATTTGTCAATCAAAAAGCATCTGGAGACGGTCAATGA

Upstream 100 bases:

>100_bases
CCAAGAGAAGGCCACACAAAAGAAGAACTCCAGGCCATTGTCGAGGCTTGTTTCAGAGGGGGAAGCTATTCAAAAAGTTC
AGGGAAAAAGTGGTAATACT

Downstream 100 bases:

>100_bases
GCTTGAATAAACCCAACAAAGCCATTGGCCCACAGGTGAGGCAAAAGCATAATGAAAAAACGAATAAACAACTTGTTATT
TTAGTTGCCCTCTCGCTTTT

Product: conjugal transfer protein TrbL

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 465; Mature: 465

Protein sequence:

>465_residues
MNKKTTTSLLILCLLGFSVCCHAQGHGIDSRDLLDNILYRFSSTASMWSQTILSYARYLFWSLATISMVWTYGLMALRKA
DIQEFLAETVKFLVVVGFFYWILDNGPAIATAIMDSMRLLAAKASGINEHVSPSDIVDVGFDIVSKAIDSSSIWSPAATT
VGLIVAGLILIILALVSINMLIILITAWILTYGGIILLGFGGGRWTQDIAINYYKTVLGIALQAFAMILIIGIGKSFVDQ
YYAAMSENIMLKEMFVMMVVAVLLLVLINKIPPVLSGIVSGGGSGGGGGLGLGGALGAAGIAGTALAGAAGAAAVQSAGG
LSALQAAFKAASHSIGASGAGSVSGDSPGSKQGSLAQAMGQASKFAGSFGSHLASGAFDVAREKAASMKDAFSAKAADTT
GGKIADAIHQRISSNAESPTINQQVSESQNVTSMGAPEGSFSSCNINSDDEISQFVNQKASGDGQ

Sequences:

>Translated_465_residues
MNKKTTTSLLILCLLGFSVCCHAQGHGIDSRDLLDNILYRFSSTASMWSQTILSYARYLFWSLATISMVWTYGLMALRKA
DIQEFLAETVKFLVVVGFFYWILDNGPAIATAIMDSMRLLAAKASGINEHVSPSDIVDVGFDIVSKAIDSSSIWSPAATT
VGLIVAGLILIILALVSINMLIILITAWILTYGGIILLGFGGGRWTQDIAINYYKTVLGIALQAFAMILIIGIGKSFVDQ
YYAAMSENIMLKEMFVMMVVAVLLLVLINKIPPVLSGIVSGGGSGGGGGLGLGGALGAAGIAGTALAGAAGAAAVQSAGG
LSALQAAFKAASHSIGASGAGSVSGDSPGSKQGSLAQAMGQASKFAGSFGSHLASGAFDVAREKAASMKDAFSAKAADTT
GGKIADAIHQRISSNAESPTINQQVSESQNVTSMGAPEGSFSSCNINSDDEISQFVNQKASGDGQ
>Mature_465_residues
MNKKTTTSLLILCLLGFSVCCHAQGHGIDSRDLLDNILYRFSSTASMWSQTILSYARYLFWSLATISMVWTYGLMALRKA
DIQEFLAETVKFLVVVGFFYWILDNGPAIATAIMDSMRLLAAKASGINEHVSPSDIVDVGFDIVSKAIDSSSIWSPAATT
VGLIVAGLILIILALVSINMLIILITAWILTYGGIILLGFGGGRWTQDIAINYYKTVLGIALQAFAMILIIGIGKSFVDQ
YYAAMSENIMLKEMFVMMVVAVLLLVLINKIPPVLSGIVSGGGSGGGGGLGLGGALGAAGIAGTALAGAAGAAAVQSAGG
LSALQAAFKAASHSIGASGAGSVSGDSPGSKQGSLAQAMGQASKFAGSFGSHLASGAFDVAREKAASMKDAFSAKAADTT
GGKIADAIHQRISSNAESPTINQQVSESQNVTSMGAPEGSFSSCNINSDDEISQFVNQKASGDGQ

Specific function: Unknown

COG id: COG3846

COG function: function code U; Type IV secretory pathway, TrbL components

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the trbL/virB6 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR014150
- InterPro:   IPR007688 [H]

Pfam domain/function: PF04610 TrbL [H]

EC number: NA

Molecular weight: Translated: 47958; Mature: 47958

Theoretical pI: Translated: 6.24; Mature: 6.24

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNKKTTTSLLILCLLGFSVCCHAQGHGIDSRDLLDNILYRFSSTASMWSQTILSYARYLF
CCCHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
WSLATISMVWTYGLMALRKADIQEFLAETVKFLVVVGFFYWILDNGPAIATAIMDSMRLL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH
AAKASGINEHVSPSDIVDVGFDIVSKAIDSSSIWSPAATTVGLIVAGLILIILALVSINM
HHHHCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
LIILITAWILTYGGIILLGFGGGRWTQDIAINYYKTVLGIALQAFAMILIIGIGKSFVDQ
HHHHHHHHHHHHCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHH
YYAAMSENIMLKEMFVMMVVAVLLLVLINKIPPVLSGIVSGGGSGGGGGLGLGGALGAAG
HHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCCCCCCCHHHHHHHHH
IAGTALAGAAGAAAVQSAGGLSALQAAFKAASHSIGASGAGSVSGDSPGSKQGSLAQAMG
HHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHH
QASKFAGSFGSHLASGAFDVAREKAASMKDAFSAKAADTTGGKIADAIHQRISSNAESPT
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCCC
INQQVSESQNVTSMGAPEGSFSSCNINSDDEISQFVNQKASGDGQ
HHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCC
>Mature Secondary Structure
MNKKTTTSLLILCLLGFSVCCHAQGHGIDSRDLLDNILYRFSSTASMWSQTILSYARYLF
CCCHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
WSLATISMVWTYGLMALRKADIQEFLAETVKFLVVVGFFYWILDNGPAIATAIMDSMRLL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH
AAKASGINEHVSPSDIVDVGFDIVSKAIDSSSIWSPAATTVGLIVAGLILIILALVSINM
HHHHCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
LIILITAWILTYGGIILLGFGGGRWTQDIAINYYKTVLGIALQAFAMILIIGIGKSFVDQ
HHHHHHHHHHHHCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHH
YYAAMSENIMLKEMFVMMVVAVLLLVLINKIPPVLSGIVSGGGSGGGGGLGLGGALGAAG
HHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCCCCCCCHHHHHHHHH
IAGTALAGAAGAAAVQSAGGLSALQAAFKAASHSIGASGAGSVSGDSPGSKQGSLAQAMG
HHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHH
QASKFAGSFGSHLASGAFDVAREKAASMKDAFSAKAADTTGGKIADAIHQRISSNAESPT
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCCC
INQQVSESQNVTSMGAPEGSFSSCNINSDDEISQFVNQKASGDGQ
HHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9163424 [H]