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The map label for this gene is 148360714

Identifier: 148360714

GI number: 148360714

Start: 765790

End: 766497

Strand: Reverse

Name: 148360714

Synonym: LPC_2662

Alternate gene names: NA

Gene position: 766497-765790 (Counterclockwise)

Preceding gene: 148360713

Following gene: 148360715

Centisome position: 21.43

GC content: 43.93

Gene sequence:

>708_bases
TTGAACAAAGTGATAACGGAATCACAAAGGTTCACTCTGCGCAACGTAGCTAATATGTTATTGTGTGTGGATGCTAGTGT
ATTGCCCACACAATCTAATATAGCACAAAAGATACAAACAAAAGGCATAATGTACAATGACCTTTGTAAAGACAGCTTCG
ATACTGAGGTCCCTCTTAACAGCAACCCTCTTTCCATAGCCGGATTCACACTGGTTGAATTATTAGTAACCCTATCTGTT
TTTGCCATTATCTTAACTCTAATCGTCCCTTCATTAAGAACTATGATTTTGAATAGCCGTTTGACTTCAAACATCGACTC
ACTGGTAAGCTCATTAAACTATGCGCGTGGAGTGGCACTTGATCGGGCAGTCAATGTGGCAGTATGTCCATTAGGTTCAC
CAGGTTCAACAGCCTGTGGAGCCAACTGGAGCTCAGGATGGATAGTAGTGACCCAACCAGTAGCAGGAGCACCAACGCTT
TTAAAATCGCACCAGACTTCAGTAAATGATCCTGTTATCACTTCGAACGTATCCAGTGTTGTTTTTGACCCACATGGGTT
ATCAACAACCCAAAGTAACTTCACTATGTGTGATAACCGAGGCAATGCGTTTGCCCGCTCGGCAATGGTTTTGGCCACTG
GATTTGTCCAATCAGGAACAACACCCGGCCAGGCAGTCTGGAGTAATGGAGCTCTGAACTGCCCTTAA

Upstream 100 bases:

>100_bases
TGGGCCAAGCATTTGCTAGCCAATTATTTGTAAAAAATTTAACTAATTTGAACTATAATTAATAATGTAGTGGGTTCGAT
CAAACGATAGGGATAATGCT

Downstream 100 bases:

>100_bases
CGGAGATAGAATATGATTAACCGAATGGATACATTAGCAAAAGACAAGGGAATGACTTTGCTGGAAGTGTTGATATCTGT
AGTCATATTAGCCGTTGGCA

Product: type IV pre-pilin

Products: NA

Alternate protein names: Type-4 Fimbrial Pilin Related Signal Peptide Protein; Fimbrial Pilin Related Signal Peptide Protein; Methylation Site Containing Protein; Prokaryotic N-Terminal Methylation Motif Domain Protein; Type IV Pre-Pilin; Type IV Prepilin; Type IV Fimbrial Fimt-Related Pilin; Tfp Pilus Assembly Protein FimT; Methylation; Pre-Pilin Like Leader Sequence

Number of amino acids: Translated: 235; Mature: 235

Protein sequence:

>235_residues
MNKVITESQRFTLRNVANMLLCVDASVLPTQSNIAQKIQTKGIMYNDLCKDSFDTEVPLNSNPLSIAGFTLVELLVTLSV
FAIILTLIVPSLRTMILNSRLTSNIDSLVSSLNYARGVALDRAVNVAVCPLGSPGSTACGANWSSGWIVVTQPVAGAPTL
LKSHQTSVNDPVITSNVSSVVFDPHGLSTTQSNFTMCDNRGNAFARSAMVLATGFVQSGTTPGQAVWSNGALNCP

Sequences:

>Translated_235_residues
MNKVITESQRFTLRNVANMLLCVDASVLPTQSNIAQKIQTKGIMYNDLCKDSFDTEVPLNSNPLSIAGFTLVELLVTLSV
FAIILTLIVPSLRTMILNSRLTSNIDSLVSSLNYARGVALDRAVNVAVCPLGSPGSTACGANWSSGWIVVTQPVAGAPTL
LKSHQTSVNDPVITSNVSSVVFDPHGLSTTQSNFTMCDNRGNAFARSAMVLATGFVQSGTTPGQAVWSNGALNCP
>Mature_235_residues
MNKVITESQRFTLRNVANMLLCVDASVLPTQSNIAQKIQTKGIMYNDLCKDSFDTEVPLNSNPLSIAGFTLVELLVTLSV
FAIILTLIVPSLRTMILNSRLTSNIDSLVSSLNYARGVALDRAVNVAVCPLGSPGSTACGANWSSGWIVVTQPVAGAPTL
LKSHQTSVNDPVITSNVSSVVFDPHGLSTTQSNFTMCDNRGNAFARSAMVLATGFVQSGTTPGQAVWSNGALNCP

Specific function: Unknown

COG id: COG4970

COG function: function code NU; Tfp pilus assembly protein FimT

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 24850; Mature: 24850

Theoretical pI: Translated: 7.78; Mature: 7.78

Prosite motif: PS00409 PROKAR_NTER_METHYL

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.6 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
5.1 %Cys+Met (Translated Protein)
2.6 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
5.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNKVITESQRFTLRNVANMLLCVDASVLPTQSNIAQKIQTKGIMYNDLCKDSFDTEVPLN
CCCCCCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCHHHHHCCCCCCCCCCC
SNPLSIAGFTLVELLVTLSVFAIILTLIVPSLRTMILNSRLTSNIDSLVSSLNYARGVAL
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
DRAVNVAVCPLGSPGSTACGANWSSGWIVVTQPVAGAPTLLKSHQTSVNDPVITSNVSSV
HHCCEEEEECCCCCCCCCCCCCCCCCEEEEECCCCCCCHHHHCCCCCCCCCEEECCCCEE
VFDPHGLSTTQSNFTMCDNRGNAFARSAMVLATGFVQSGTTPGQAVWSNGALNCP
EECCCCCCCCCCCCEEECCCCCHHHHHHHHHHHHHHHCCCCCCHHHCCCCCCCCC
>Mature Secondary Structure
MNKVITESQRFTLRNVANMLLCVDASVLPTQSNIAQKIQTKGIMYNDLCKDSFDTEVPLN
CCCCCCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCHHHHHCCCCCCCCCCC
SNPLSIAGFTLVELLVTLSVFAIILTLIVPSLRTMILNSRLTSNIDSLVSSLNYARGVAL
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
DRAVNVAVCPLGSPGSTACGANWSSGWIVVTQPVAGAPTLLKSHQTSVNDPVITSNVSSV
HHCCEEEEECCCCCCCCCCCCCCCCCEEEEECCCCCCCHHHHCCCCCCCCCEEECCCCEE
VFDPHGLSTTQSNFTMCDNRGNAFARSAMVLATGFVQSGTTPGQAVWSNGALNCP
EECCCCCCCCCCCCEEECCCCCHHHHHHHHHHHHHHHCCCCCCHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA