Click here to switch to the map view.

The map label for this gene is 148360641

Identifier: 148360641

GI number: 148360641

Start: 880518

End: 881690

Strand: Reverse

Name: 148360641

Synonym: LPC_2587

Alternate gene names: NA

Gene position: 881690-880518 (Counterclockwise)

Preceding gene: 148360640

Following gene: 148360648

Centisome position: 24.65

GC content: 39.56

Gene sequence:

>1173_bases
ATGCGATTAATATTTACAGGAGTATTATGCCTGTTGACTCTCAATGCCCAGGCGAATGTGATACAGTATTTTGCAGGAAT
TAGTTATAACAACCCCGCTGATTTATTCAAAGTAAAAAATGGTATCTTGCTTGTTGGAGGAACCGGCTCTTATGCCGATT
TGCAATTTAAGGGAAGCGCCTTAAATTTCAATACGTTTCAATACGATTCAGGGGTTAATCACTCGCGTACTTATATTGTT
TGGCCATATGGTCGAGTTGCCAAGCGCCTCAATGATAAGACTGTAGTTGCAGTAGATCTTACCGAACCTTTTAATTCCAA
TCTTGATTGGGGCAACGACGCTTTTACAAGATATGCTGCGACCCAAAATTACCTGACCGATGTGGATCTAAGCCCCAAAA
TATCCTATGCGATTAGCAAAAAATTACAAATTGGTGGTGGTATAAACTTTAATGTACTACTAAAGAATGAAGTCAATTGG
GCTTTTCCTACCGGCCAATCAACTTATGCGAATTTAATTAACCGATCCTCTAGTTTTGGTGTGGGCTATAATTTGGGGAT
TAATTATGCAGTGAATGATACCAATTTCCTTGGTATCACTTATTATTCAAGAATTCGCCAAAATACTTCCGGTACCAGTT
ATCTGGGATTAGCTGCCAACCCTGATTTCCAATTCGGTTTTTATATGCCAGCCACAACGGTTGCCAGTTATGTCCATATT
TTTAATCCCAAATGGCTCATCAACCTACAGGTTTTTCAAAGCGAATGGAACGCCAATCAAAAAGTGAGACTTTATAACAC
AGCAGCACCACCTCCATTTACTAATTTTATTTTTGATATGCATTTTGATGCCTCTTATGCTTATCTTGCCGCAATACGTA
AACAAGTCTCTGATAAATTAGGCATTGCGCTAGCAGGCATGATCGATGATGGTCCTGAAGAAGATGGCCTTAGAACCATC
GTTTTCCCTTCTGATACCCAATATTTTCTTGGATTGATTGGTGACTACCGTTTTACGGAACATGCTTCCATGGAACTTAT
CTTGGGACATGTGTATTCTAATCCCAGCATTCAAAACAAAGCCAAGGTAAACAATGTACCCGTTCCCTTTACTACAGGCC
GGGTGACAATTAATGCCAATGTTTTGGATCTTAAAGTCAAAATCGAGGGGTGA

Upstream 100 bases:

>100_bases
CCAACTCACCTCCGAGTGGCTCTACAACAAATACCCAGAATTAAATTCAACAATTAGTGCGGCATTCCATTAAGAATGCT
GCCAAAATCACGGAAATATC

Downstream 100 bases:

>100_bases
TCTTCCAGGTGTAACCACCTGGCACTTCCTCCAAGAGTTTTATTTTTGAATAGTCCTCTTTTTAAATAGCCAATAATAAG
TCCATGATCCTGCTATCAGC

Product: outer membrane protein

Products: NA

Alternate protein names: Long-Chain Fatty Acid Transporter; Aromatic Hydrocarbon Degradation Membrane Protein

Number of amino acids: Translated: 390; Mature: 390

Protein sequence:

>390_residues
MRLIFTGVLCLLTLNAQANVIQYFAGISYNNPADLFKVKNGILLVGGTGSYADLQFKGSALNFNTFQYDSGVNHSRTYIV
WPYGRVAKRLNDKTVVAVDLTEPFNSNLDWGNDAFTRYAATQNYLTDVDLSPKISYAISKKLQIGGGINFNVLLKNEVNW
AFPTGQSTYANLINRSSSFGVGYNLGINYAVNDTNFLGITYYSRIRQNTSGTSYLGLAANPDFQFGFYMPATTVASYVHI
FNPKWLINLQVFQSEWNANQKVRLYNTAAPPPFTNFIFDMHFDASYAYLAAIRKQVSDKLGIALAGMIDDGPEEDGLRTI
VFPSDTQYFLGLIGDYRFTEHASMELILGHVYSNPSIQNKAKVNNVPVPFTTGRVTINANVLDLKVKIEG

Sequences:

>Translated_390_residues
MRLIFTGVLCLLTLNAQANVIQYFAGISYNNPADLFKVKNGILLVGGTGSYADLQFKGSALNFNTFQYDSGVNHSRTYIV
WPYGRVAKRLNDKTVVAVDLTEPFNSNLDWGNDAFTRYAATQNYLTDVDLSPKISYAISKKLQIGGGINFNVLLKNEVNW
AFPTGQSTYANLINRSSSFGVGYNLGINYAVNDTNFLGITYYSRIRQNTSGTSYLGLAANPDFQFGFYMPATTVASYVHI
FNPKWLINLQVFQSEWNANQKVRLYNTAAPPPFTNFIFDMHFDASYAYLAAIRKQVSDKLGIALAGMIDDGPEEDGLRTI
VFPSDTQYFLGLIGDYRFTEHASMELILGHVYSNPSIQNKAKVNNVPVPFTTGRVTINANVLDLKVKIEG
>Mature_390_residues
MRLIFTGVLCLLTLNAQANVIQYFAGISYNNPADLFKVKNGILLVGGTGSYADLQFKGSALNFNTFQYDSGVNHSRTYIV
WPYGRVAKRLNDKTVVAVDLTEPFNSNLDWGNDAFTRYAATQNYLTDVDLSPKISYAISKKLQIGGGINFNVLLKNEVNW
AFPTGQSTYANLINRSSSFGVGYNLGINYAVNDTNFLGITYYSRIRQNTSGTSYLGLAANPDFQFGFYMPATTVASYVHI
FNPKWLINLQVFQSEWNANQKVRLYNTAAPPPFTNFIFDMHFDASYAYLAAIRKQVSDKLGIALAGMIDDGPEEDGLRTI
VFPSDTQYFLGLIGDYRFTEHASMELILGHVYSNPSIQNKAKVNNVPVPFTTGRVTINANVLDLKVKIEG

Specific function: Unknown

COG id: COG2067

COG function: function code I; Long-chain fatty acid transport protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 43381; Mature: 43381

Theoretical pI: Translated: 8.65; Mature: 8.65

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
1.5 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
1.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRLIFTGVLCLLTLNAQANVIQYFAGISYNNPADLFKVKNGILLVGGTGSYADLQFKGSA
CEEEHEEEEEEEEECCCCCEEHHHHCCCCCCCHHHEEECCCEEEEECCCCEEEEEEECCE
LNFNTFQYDSGVNHSRTYIVWPYGRVAKRLNDKTVVAVDLTEPFNSNLDWGNDAFTRYAA
EECEEEEECCCCCCCEEEEEECCHHHHHHCCCCEEEEEEECCCCCCCCCCCCCHHHEEEC
TQNYLTDVDLSPKISYAISKKLQIGGGINFNVLLKNEVNWAFPTGQSTYANLINRSSSFG
CCCCEEECCCCCCEEEEEEEEEEECCCCEEEEEEECCCCEEECCCCHHHHHHHCCCCCCC
VGYNLGINYAVNDTNFLGITYYSRIRQNTSGTSYLGLAANPDFQFGFYMPATTVASYVHI
CEEECEEEEEECCCCEEEEEEEHHHHCCCCCCEEEEEECCCCCEEEEECCHHHHHHHHEE
FNPKWLINLQVFQSEWNANQKVRLYNTAAPPPFTNFIFDMHFDASYAYLAAIRKQVSDKL
ECCEEEEEEEEEECCCCCCCEEEEEECCCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHH
GIALAGMIDDGPEEDGLRTIVFPSDTQYFLGLIGDYRFTEHASMELILGHVYSNPSIQNK
CEEEEEECCCCCCCCCCEEEEECCCCCEEEEECCCCEECCCCCEEEEEEEEECCCCCCCC
AKVNNVPVPFTTGRVTINANVLDLKVKIEG
CCCCCCCCCEECCEEEEEEEEEEEEEEECC
>Mature Secondary Structure
MRLIFTGVLCLLTLNAQANVIQYFAGISYNNPADLFKVKNGILLVGGTGSYADLQFKGSA
CEEEHEEEEEEEEECCCCCEEHHHHCCCCCCCHHHEEECCCEEEEECCCCEEEEEEECCE
LNFNTFQYDSGVNHSRTYIVWPYGRVAKRLNDKTVVAVDLTEPFNSNLDWGNDAFTRYAA
EECEEEEECCCCCCCEEEEEECCHHHHHHCCCCEEEEEEECCCCCCCCCCCCCHHHEEEC
TQNYLTDVDLSPKISYAISKKLQIGGGINFNVLLKNEVNWAFPTGQSTYANLINRSSSFG
CCCCEEECCCCCCEEEEEEEEEEECCCCEEEEEEECCCCEEECCCCHHHHHHHCCCCCCC
VGYNLGINYAVNDTNFLGITYYSRIRQNTSGTSYLGLAANPDFQFGFYMPATTVASYVHI
CEEECEEEEEECCCCEEEEEEEHHHHCCCCCCEEEEEECCCCCEEEEECCHHHHHHHHEE
FNPKWLINLQVFQSEWNANQKVRLYNTAAPPPFTNFIFDMHFDASYAYLAAIRKQVSDKL
ECCEEEEEEEEEECCCCCCCEEEEEECCCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHH
GIALAGMIDDGPEEDGLRTIVFPSDTQYFLGLIGDYRFTEHASMELILGHVYSNPSIQNK
CEEEEEECCCCCCCCCCEEEEECCCCCEEEEECCCCEECCCCCEEEEEEEEECCCCCCCC
AKVNNVPVPFTTGRVTINANVLDLKVKIEG
CCCCCCCCCEECCEEEEEEEEEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA