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The map label for this gene is rmuC [H]

Identifier: 148360393

GI number: 148360393

Start: 1147979

End: 1149241

Strand: Reverse

Name: rmuC [H]

Synonym: LPC_2332

Alternate gene names: 148360393

Gene position: 1149241-1147979 (Counterclockwise)

Preceding gene: 148360392

Following gene: 148360394

Centisome position: 32.13

GC content: 38.24

Gene sequence:

>1263_bases
ATGGCATTATTTTCTTCTGTCACTTTGTTTGAGGGCATAGCGTTGGCTATTGCCTTTCAATTCTTATTGCTTTTCTGGGT
TTTGGTAAAACAAGCACAGCAAAAAAAACTGACCGAACAAGTTGGTGAAAGAATACAACAAACACTAATCTCTCAACTTC
ACCAGTTACATATTGATTTAAGCCAATCATATCAAACGAGCCAACAATTTATTAATGAAAAGATAGCTCAAGGACAACTG
GCTACACAACAGCTCATTAGTGATGCCATACAAAGACAAATGGCCGATGTCAGAGAGCAAATGACTCATAGCTTCAAACA
TCATGCGAGCTCACTCACTTCTCACTTACAATTACTAACTGAGGAAATTCGTAATCATTTAAACACACTAACTCAGCAGG
TTAATCACAAATTGACCGAAGGTTTTGAGAAAACTTCGTCTACTTTTATTGACGTGGTAAAGCGATTAACCATCATTGAT
GAGGCACAAAAGAAAATCACTGAACTCTCCAGTCATGTTGTCAGCCTTCAGGACGTATTAGTGGACAAAAAAGCTCGCGG
TGCCTTTGGTGAAGTTCAATTATCAACACTCATCAGCAATATGCTTCCCAGCGCAAGTTATCAAATGCAATATACCCTCA
GTAATCAAAAACGGGCTGACTGTGTTTTGTTCTTACCCGAGCCCACTGGAAATATTGTCATAGACGCCAAATTTCCCCTG
GAAACTTATCAACGATTAATCAACAGTGATGCCTTATCCACAGATCGTAAGTCATTACAACAACAATTTCGCCAAGACAT
TCAAAAACATATTAAGGACATCGCTGAAAAATATATCGTGCCCAATGAAACAACAGATGGTGCCATGATGTTTATTCCTG
CAGAATCTATATTTGCTGAGATTCATGCAAACTATCCTGATTTAATTGCCATGTCTCAAAAGCTAAAAGTCTGGCTGGTA
TCGCCTAGCACATTAATGGCTGTACTGACTACAGCAAGGGCAGTACTTAAAGATGATGCAACTCGCAAACAAGTACATAT
CATTCAAAAACATCTTCAAGCCCTGGCCAATGATTTTCAACGTTTTGAAAAGAGAATGGATAAATTATCCAAACACATTG
ACTTGGCACATCAGGACGTTAATGAAGTCAATACATCAGCCAAAAAGATCACTTCCAGATTCCAAAAAATTGAATCAGTC
GATATCGAATTGGATGAACACGAAGTAACTCAATTAGAATTGGTCGAGTCTGAATCCATCTAA

Upstream 100 bases:

>100_bases
CCTCTATTTGGGTTATTTACGCTTGATAGACTATGGGCAGTTAAAAACTGTGTATCAATACAACCAACCTGTCAAGCTTA
GTCAGTTAGTGGATTAATGA

Downstream 100 bases:

>100_bases
AATAAAATCTTTATGGTGCAGAATACCTAATTTAGCATTATACTAAGCGGTTTTCAGTTTTAATCATTAAATTCCAATGA
ATACAAAAACGCTACTTTAC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 420; Mature: 419

Protein sequence:

>420_residues
MALFSSVTLFEGIALAIAFQFLLLFWVLVKQAQQKKLTEQVGERIQQTLISQLHQLHIDLSQSYQTSQQFINEKIAQGQL
ATQQLISDAIQRQMADVREQMTHSFKHHASSLTSHLQLLTEEIRNHLNTLTQQVNHKLTEGFEKTSSTFIDVVKRLTIID
EAQKKITELSSHVVSLQDVLVDKKARGAFGEVQLSTLISNMLPSASYQMQYTLSNQKRADCVLFLPEPTGNIVIDAKFPL
ETYQRLINSDALSTDRKSLQQQFRQDIQKHIKDIAEKYIVPNETTDGAMMFIPAESIFAEIHANYPDLIAMSQKLKVWLV
SPSTLMAVLTTARAVLKDDATRKQVHIIQKHLQALANDFQRFEKRMDKLSKHIDLAHQDVNEVNTSAKKITSRFQKIESV
DIELDEHEVTQLELVESESI

Sequences:

>Translated_420_residues
MALFSSVTLFEGIALAIAFQFLLLFWVLVKQAQQKKLTEQVGERIQQTLISQLHQLHIDLSQSYQTSQQFINEKIAQGQL
ATQQLISDAIQRQMADVREQMTHSFKHHASSLTSHLQLLTEEIRNHLNTLTQQVNHKLTEGFEKTSSTFIDVVKRLTIID
EAQKKITELSSHVVSLQDVLVDKKARGAFGEVQLSTLISNMLPSASYQMQYTLSNQKRADCVLFLPEPTGNIVIDAKFPL
ETYQRLINSDALSTDRKSLQQQFRQDIQKHIKDIAEKYIVPNETTDGAMMFIPAESIFAEIHANYPDLIAMSQKLKVWLV
SPSTLMAVLTTARAVLKDDATRKQVHIIQKHLQALANDFQRFEKRMDKLSKHIDLAHQDVNEVNTSAKKITSRFQKIESV
DIELDEHEVTQLELVESESI
>Mature_419_residues
ALFSSVTLFEGIALAIAFQFLLLFWVLVKQAQQKKLTEQVGERIQQTLISQLHQLHIDLSQSYQTSQQFINEKIAQGQLA
TQQLISDAIQRQMADVREQMTHSFKHHASSLTSHLQLLTEEIRNHLNTLTQQVNHKLTEGFEKTSSTFIDVVKRLTIIDE
AQKKITELSSHVVSLQDVLVDKKARGAFGEVQLSTLISNMLPSASYQMQYTLSNQKRADCVLFLPEPTGNIVIDAKFPLE
TYQRLINSDALSTDRKSLQQQFRQDIQKHIKDIAEKYIVPNETTDGAMMFIPAESIFAEIHANYPDLIAMSQKLKVWLVS
PSTLMAVLTTARAVLKDDATRKQVHIIQKHLQALANDFQRFEKRMDKLSKHIDLAHQDVNEVNTSAKKITSRFQKIESVD
IELDEHEVTQLELVESESI

Specific function: Involved in DNA recombination [H]

COG id: COG1322

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the rmuC family [H]

Homologues:

Organism=Escherichia coli, GI1790266, Length=423, Percent_Identity=24.822695035461, Blast_Score=84, Evalue=2e-17,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003798 [H]

Pfam domain/function: PF02646 RmuC [H]

EC number: NA

Molecular weight: Translated: 47888; Mature: 47756

Theoretical pI: Translated: 6.73; Mature: 6.73

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MALFSSVTLFEGIALAIAFQFLLLFWVLVKQAQQKKLTEQVGERIQQTLISQLHQLHIDL
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SQSYQTSQQFINEKIAQGQLATQQLISDAIQRQMADVREQMTHSFKHHASSLTSHLQLLT
HHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
EEIRNHLNTLTQQVNHKLTEGFEKTSSTFIDVVKRLTIIDEAQKKITELSSHVVSLQDVL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VDKKARGAFGEVQLSTLISNMLPSASYQMQYTLSNQKRADCVLFLPEPTGNIVIDAKFPL
HHHHHCCCCHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCEEEEECCCCCCEEEEECCCH
ETYQRLINSDALSTDRKSLQQQFRQDIQKHIKDIAEKYIVPNETTDGAMMFIPAESIFAE
HHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEEHHHHHHH
IHANYPDLIAMSQKLKVWLVSPSTLMAVLTTARAVLKDDATRKQVHIIQKHLQALANDFQ
HHCCCCHHHHHHCCCEEEEECHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHH
RFEKRMDKLSKHIDLAHQDVNEVNTSAKKITSRFQKIESVDIELDEHEVTQLELVESESI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEECCHHHHHHHHHHCCCC
>Mature Secondary Structure 
ALFSSVTLFEGIALAIAFQFLLLFWVLVKQAQQKKLTEQVGERIQQTLISQLHQLHIDL
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SQSYQTSQQFINEKIAQGQLATQQLISDAIQRQMADVREQMTHSFKHHASSLTSHLQLLT
HHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
EEIRNHLNTLTQQVNHKLTEGFEKTSSTFIDVVKRLTIIDEAQKKITELSSHVVSLQDVL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VDKKARGAFGEVQLSTLISNMLPSASYQMQYTLSNQKRADCVLFLPEPTGNIVIDAKFPL
HHHHHCCCCHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCEEEEECCCCCCEEEEECCCH
ETYQRLINSDALSTDRKSLQQQFRQDIQKHIKDIAEKYIVPNETTDGAMMFIPAESIFAE
HHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEEHHHHHHH
IHANYPDLIAMSQKLKVWLVSPSTLMAVLTTARAVLKDDATRKQVHIIQKHLQALANDFQ
HHCCCCHHHHHHCCCEEEEECHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHH
RFEKRMDKLSKHIDLAHQDVNEVNTSAKKITSRFQKIESVDIELDEHEVTQLELVESESI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEECCHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 10910347 [H]