Click here to switch to the map view.

The map label for this gene is 148360381

Identifier: 148360381

GI number: 148360381

Start: 1167839

End: 1168390

Strand: Reverse

Name: 148360381

Synonym: LPC_2320

Alternate gene names: NA

Gene position: 1168390-1167839 (Counterclockwise)

Preceding gene: 148360380

Following gene: 148360385

Centisome position: 32.67

GC content: 42.21

Gene sequence:

>552_bases
ATGACAAGGTCAAATAGTGAACAACTGGAGGAAGAATACCTTAACTCAAGAAGGGAATATTGTATAGCAATGATGGCCGT
ACACGATAAAGCAAGGGCATTACTGAGTGAAACTCCAATAGATGGAAGTATGAAGCAAGCTATAATAAAATCAAGCGGGG
TAAAGATCCGGCCTAACGAGACACAAGACGAATTCGATGAGCGTTTCGAGGACGAAATGGGTTTAACGATAGATGACTAC
GTTGGTTTTGCGCTTGATATATTAGAAAAAAAATTGGAGCCTGCGAGACAGAGTATTGTAGCTGCAGCAAATAAAGAACT
TGGTTCTCTTACCTCTGGACCATCTGGTTCGGCATGGGAAGATTTTCAACACACAATCCACGAGGGAGCAGAATATAAAA
CTATAGAAGTGGCTAAGTGTCTCCCTGAGTCTGAGCGTTGCATACAAGCTTTTAATCAAGCTAAGCTGGCATTTCGTGAT
GCAGCCACAAACTTAATACATGCAGAGAAACTGGAAGAACCAGAAGAGCCGAATCAAGGCCCCAGATTCTAA

Upstream 100 bases:

>100_bases
AGTATGCACCATGACCTTGATGGTATTATTATTGTCTTTTTGAATAATTATAAATCAAATGCTACCTTTTAAATATGGGT
ATATGAGTAGGGTAGATATC

Downstream 100 bases:

>100_bases
AACCAGGACACAGGAAGAAGCAAGAAGCTAAAAAATTCTTTTGCTGTTTTTCATTTTACCATCAAATGATGAGAAAATAG
AGTTTCAAAATCAACATAAG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 183; Mature: 182

Protein sequence:

>183_residues
MTRSNSEQLEEEYLNSRREYCIAMMAVHDKARALLSETPIDGSMKQAIIKSSGVKIRPNETQDEFDERFEDEMGLTIDDY
VGFALDILEKKLEPARQSIVAAANKELGSLTSGPSGSAWEDFQHTIHEGAEYKTIEVAKCLPESERCIQAFNQAKLAFRD
AATNLIHAEKLEEPEEPNQGPRF

Sequences:

>Translated_183_residues
MTRSNSEQLEEEYLNSRREYCIAMMAVHDKARALLSETPIDGSMKQAIIKSSGVKIRPNETQDEFDERFEDEMGLTIDDY
VGFALDILEKKLEPARQSIVAAANKELGSLTSGPSGSAWEDFQHTIHEGAEYKTIEVAKCLPESERCIQAFNQAKLAFRD
AATNLIHAEKLEEPEEPNQGPRF
>Mature_182_residues
TRSNSEQLEEEYLNSRREYCIAMMAVHDKARALLSETPIDGSMKQAIIKSSGVKIRPNETQDEFDERFEDEMGLTIDDYV
GFALDILEKKLEPARQSIVAAANKELGSLTSGPSGSAWEDFQHTIHEGAEYKTIEVAKCLPESERCIQAFNQAKLAFRDA
ATNLIHAEKLEEPEEPNQGPRF

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 20595; Mature: 20464

Theoretical pI: Translated: 4.45; Mature: 4.45

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTRSNSEQLEEEYLNSRREYCIAMMAVHDKARALLSETPIDGSMKQAIIKSSGVKIRPNE
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCEECCCC
TQDEFDERFEDEMGLTIDDYVGFALDILEKKLEPARQSIVAAANKELGSLTSGPSGSAWE
CHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHH
DFQHTIHEGAEYKTIEVAKCLPESERCIQAFNQAKLAFRDAATNLIHAEKLEEPEEPNQG
HHHHHHHCCCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC
PRF
CCC
>Mature Secondary Structure 
TRSNSEQLEEEYLNSRREYCIAMMAVHDKARALLSETPIDGSMKQAIIKSSGVKIRPNE
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCEECCCC
TQDEFDERFEDEMGLTIDDYVGFALDILEKKLEPARQSIVAAANKELGSLTSGPSGSAWE
CHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHH
DFQHTIHEGAEYKTIEVAKCLPESERCIQAFNQAKLAFRDAATNLIHAEKLEEPEEPNQG
HHHHHHHCCCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC
PRF
CCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA