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The map label for this gene is 148360358

Identifier: 148360358

GI number: 148360358

Start: 1189397

End: 1191391

Strand: Reverse

Name: 148360358

Synonym: LPC_2296

Alternate gene names: NA

Gene position: 1191391-1189397 (Counterclockwise)

Preceding gene: 148360357

Following gene: 148360359

Centisome position: 33.31

GC content: 40.3

Gene sequence:

>1995_bases
ATGAGCAATTACCCCATTAATAACCTATTAAGAGAACCAACAGAAGCCTGGTCAGCCATTACCTGTTTGTCTCTAGCCTT
GCTGGCATATACTCAACCGCATTTGTTTTTACTAACACAAACTATGGGATTATACGCTGCGCTCGCATTGTTAATCCCTG
GAATTTATAGAGCCTGGCAAGCAATTAAAGTAAAACGCTATCACCGAAGATTATTAGCCATGCCCACTTATGCCCTATCC
ACCACAGAAATACCTTTATCCAAAAACTGGTTGTTCTTGGGCAAAGGCTTTCGCTGGCGACCAAGCCACACTCAAAAGCT
GCATCAAATTAAACAGGTCAAAAATGAAAAGTTCATGCAACGAAGCTCTTGCTACCAACTTGCCAGAAGATTCTGCCAAA
ATCATGAACATACAAAGCTAGCCAAATGGTTAAATACAAATTCTAAACTAAACCCTTTTAGACCTGATCCACCTGTTGGC
GGTAGTCCATTCTTGCATGGTATAGGCGAAGAAGATAAACCTGTATACATCCCTCAAGATGTACGTGTCGGTCATACCTT
CGTAGTCGGTACAACCAGAGTAGGAAAAACACGGTTGGCCAGTATTCTAATTAACCAAGACATCCGAAATGGGGATGCGG
TTATCGTTGTAGATCCAAAAGGCGATCAAGACCTGGTTAGAGACATGATGGCAGCCTGTAAAGTATCAGGCCGAACAGAA
GACTTCAAAATCGTACACTTAGGCTTTCCAGAACAATCTGCACAATACAACCCCTTAAAAAATTTCGACCAAATCAGTGA
GGTTGCAACACGTATCACCGATGCAATCTCCGCAGAGGGAGAAGGAAAACAGTTCGCAGCCTTCGCCTGGAAATACGTCA
ATATCGTGGCTATATGCCTAGAAGAAATGAATCAACCCCTTACCTACCAAACAATAGCCTTCTATATCAGCCGACTAGAA
CAATTATTAATGTCCTATGCTGATAAGATTCTTCCTAACCACTACCCAAATTACCATCAAGAGATAGATGAAATCATCGA
GGAGCATGATAGTAAAATAGGCAAAAATAATAAGACAAAATCCCCTATGGAACGCCACCAAGCAGTCATTCAATATGTCA
AAAACCACATCAATAAAACGATCAAAAACAACAATGCTGAAGCTCTGCACGATCAAATACTAATCGACCTCTACGATGCA
GCCATTATGGATAAACACTATTACGACAAAATCACCGCCAATGTCGGTCCTGTACTGTCTGAAATCAATAAAAGTAATGC
CTCAAAAATCCTATCGTCAAAAGCTCAACCAGGTGAAATTGAATTGATGGATGTAATTAAAAATAAGAAAGTTCTTTATA
TCGGCTTAGATAGCCTAACCAATCCCAATATTGCCCAAGCAGTAGGAAAAGCCTTTTTGTCTGATCTGGTTTCCACAGCA
GGTAAAATCTACAAAGAACCTAACGCGCGGTACACTTTAAATCTACACTGCGATGAGTTATCAGAGATTATTCAGGATTC
TTTTGTGAAGATTCTTAATAAGGCAGGTGGTGCTGGGTTTCAAGTAACCGCTTACGCTCAAACTATTCAAGATATGGAAG
TTGCACTCGGTTCCAGAGCTAAAGCAGAAGTATCCGAGGGAAATTTTAATACTCTAATTATGCTGCGTGTTAAAAATGAA
GAAACAGCCAATTTACTGGTTAAGGTGCTGCCACAAGTAGGTGTTGTCGGACATACTCAAGTTTCGATGGTTAACGACAC
ACCACATGGGGATGACGGTGTTTACTTTAATACGACTAATGAAGATAGAGTCCAAACGTCTTCTGTGCCGATGGTTGGAG
TGGATGATATTATTTCTTTACCTAAAGGACAGGCTTTTATGATAGTAAATGGTGGAGAACTATACAAAACTCGAATTCCT
CTACCAATAAGTTGTAAAAAACAGACTAAAACACCATTGCCAATATTCAGCACCTACATCAATCGCACTATATGA

Upstream 100 bases:

>100_bases
ACCAAATAACCACAGAGCAGCTGAACACCGCTTTAAAAGCTCGGTGGTATCTGCTGGGTATTTTTGTATTTATTGATATT
TTGATGATTGGAGGCAAACT

Downstream 100 bases:

>100_bases
TACAATTTATTCAAAGCATTATAACCCAATCACCTAATGAAGATTTAGTTCTAAGGGTATAACCAGAAATGCACAAGAAT
GAATACTGAATCAAAACGAA

Product: conjugative coupling factor TraD

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 664; Mature: 663

Protein sequence:

>664_residues
MSNYPINNLLREPTEAWSAITCLSLALLAYTQPHLFLLTQTMGLYAALALLIPGIYRAWQAIKVKRYHRRLLAMPTYALS
TTEIPLSKNWLFLGKGFRWRPSHTQKLHQIKQVKNEKFMQRSSCYQLARRFCQNHEHTKLAKWLNTNSKLNPFRPDPPVG
GSPFLHGIGEEDKPVYIPQDVRVGHTFVVGTTRVGKTRLASILINQDIRNGDAVIVVDPKGDQDLVRDMMAACKVSGRTE
DFKIVHLGFPEQSAQYNPLKNFDQISEVATRITDAISAEGEGKQFAAFAWKYVNIVAICLEEMNQPLTYQTIAFYISRLE
QLLMSYADKILPNHYPNYHQEIDEIIEEHDSKIGKNNKTKSPMERHQAVIQYVKNHINKTIKNNNAEALHDQILIDLYDA
AIMDKHYYDKITANVGPVLSEINKSNASKILSSKAQPGEIELMDVIKNKKVLYIGLDSLTNPNIAQAVGKAFLSDLVSTA
GKIYKEPNARYTLNLHCDELSEIIQDSFVKILNKAGGAGFQVTAYAQTIQDMEVALGSRAKAEVSEGNFNTLIMLRVKNE
ETANLLVKVLPQVGVVGHTQVSMVNDTPHGDDGVYFNTTNEDRVQTSSVPMVGVDDIISLPKGQAFMIVNGGELYKTRIP
LPISCKKQTKTPLPIFSTYINRTI

Sequences:

>Translated_664_residues
MSNYPINNLLREPTEAWSAITCLSLALLAYTQPHLFLLTQTMGLYAALALLIPGIYRAWQAIKVKRYHRRLLAMPTYALS
TTEIPLSKNWLFLGKGFRWRPSHTQKLHQIKQVKNEKFMQRSSCYQLARRFCQNHEHTKLAKWLNTNSKLNPFRPDPPVG
GSPFLHGIGEEDKPVYIPQDVRVGHTFVVGTTRVGKTRLASILINQDIRNGDAVIVVDPKGDQDLVRDMMAACKVSGRTE
DFKIVHLGFPEQSAQYNPLKNFDQISEVATRITDAISAEGEGKQFAAFAWKYVNIVAICLEEMNQPLTYQTIAFYISRLE
QLLMSYADKILPNHYPNYHQEIDEIIEEHDSKIGKNNKTKSPMERHQAVIQYVKNHINKTIKNNNAEALHDQILIDLYDA
AIMDKHYYDKITANVGPVLSEINKSNASKILSSKAQPGEIELMDVIKNKKVLYIGLDSLTNPNIAQAVGKAFLSDLVSTA
GKIYKEPNARYTLNLHCDELSEIIQDSFVKILNKAGGAGFQVTAYAQTIQDMEVALGSRAKAEVSEGNFNTLIMLRVKNE
ETANLLVKVLPQVGVVGHTQVSMVNDTPHGDDGVYFNTTNEDRVQTSSVPMVGVDDIISLPKGQAFMIVNGGELYKTRIP
LPISCKKQTKTPLPIFSTYINRTI
>Mature_663_residues
SNYPINNLLREPTEAWSAITCLSLALLAYTQPHLFLLTQTMGLYAALALLIPGIYRAWQAIKVKRYHRRLLAMPTYALST
TEIPLSKNWLFLGKGFRWRPSHTQKLHQIKQVKNEKFMQRSSCYQLARRFCQNHEHTKLAKWLNTNSKLNPFRPDPPVGG
SPFLHGIGEEDKPVYIPQDVRVGHTFVVGTTRVGKTRLASILINQDIRNGDAVIVVDPKGDQDLVRDMMAACKVSGRTED
FKIVHLGFPEQSAQYNPLKNFDQISEVATRITDAISAEGEGKQFAAFAWKYVNIVAICLEEMNQPLTYQTIAFYISRLEQ
LLMSYADKILPNHYPNYHQEIDEIIEEHDSKIGKNNKTKSPMERHQAVIQYVKNHINKTIKNNNAEALHDQILIDLYDAA
IMDKHYYDKITANVGPVLSEINKSNASKILSSKAQPGEIELMDVIKNKKVLYIGLDSLTNPNIAQAVGKAFLSDLVSTAG
KIYKEPNARYTLNLHCDELSEIIQDSFVKILNKAGGAGFQVTAYAQTIQDMEVALGSRAKAEVSEGNFNTLIMLRVKNEE
TANLLVKVLPQVGVVGHTQVSMVNDTPHGDDGVYFNTTNEDRVQTSSVPMVGVDDIISLPKGQAFMIVNGGELYKTRIPL
PISCKKQTKTPLPIFSTYINRTI

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 74601; Mature: 74470

Theoretical pI: Translated: 8.93; Mature: 8.93

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSNYPINNLLREPTEAWSAITCLSLALLAYTQPHLFLLTQTMGLYAALALLIPGIYRAWQ
CCCCCHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCEEHHHHHHHHHHHHHHHHHHHHHHH
AIKVKRYHRRLLAMPTYALSTTEIPLSKNWLFLGKGFRWRPSHTQKLHQIKQVKNEKFMQ
HHHHHHHHHHHHHCCCCEECCCCCCCCCCEEEECCCCEECCCHHHHHHHHHHHHHHHHHH
RSSCYQLARRFCQNHEHTKLAKWLNTNSKLNPFRPDPPVGGSPFLHGIGEEDKPVYIPQD
HHHHHHHHHHHHCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEECCCC
VRVGHTFVVGTTRVGKTRLASILINQDIRNGDAVIVVDPKGDQDLVRDMMAACKVSGRTE
CCCCCEEEEECCCCCHHHHHHHHHHCCCCCCCEEEEECCCCCHHHHHHHHHHHHCCCCCC
DFKIVHLGFPEQSAQYNPLKNFDQISEVATRITDAISAEGEGKQFAAFAWKYVNIVAICL
CEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHH
EEMNQPLTYQTIAFYISRLEQLLMSYADKILPNHYPNYHQEIDEIIEEHDSKIGKNNKTK
HHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCCCCC
SPMERHQAVIQYVKNHINKTIKNNNAEALHDQILIDLYDAAIMDKHYYDKITANVGPVLS
CHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
EINKSNASKILSSKAQPGEIELMDVIKNKKVLYIGLDSLTNPNIAQAVGKAFLSDLVSTA
HHHHHHHHHHHHCCCCCCCCHHHHHHCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHH
GKIYKEPNARYTLNLHCDELSEIIQDSFVKILNKAGGAGFQVTAYAQTIQDMEVALGSRA
HHHHCCCCCEEEEEECHHHHHHHHHHHHHHHHHHCCCCCEEEEHHHHHHHHHHHHHCCCC
KAEVSEGNFNTLIMLRVKNEETANLLVKVLPQVGVVGHTQVSMVNDTPHGDDGVYFNTTN
CCCCCCCCCCEEEEEEECCCHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCCCEEEECCC
EDRVQTSSVPMVGVDDIISLPKGQAFMIVNGGELYKTRIPLPISCKKQTKTPLPIFSTYI
CCCCEECCCCCCCHHHHHCCCCCCEEEEEECCCEEEEECCCCCCCCCCCCCCCHHHHHHH
NRTI
HCCC
>Mature Secondary Structure 
SNYPINNLLREPTEAWSAITCLSLALLAYTQPHLFLLTQTMGLYAALALLIPGIYRAWQ
CCCCHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCEEHHHHHHHHHHHHHHHHHHHHHHH
AIKVKRYHRRLLAMPTYALSTTEIPLSKNWLFLGKGFRWRPSHTQKLHQIKQVKNEKFMQ
HHHHHHHHHHHHHCCCCEECCCCCCCCCCEEEECCCCEECCCHHHHHHHHHHHHHHHHHH
RSSCYQLARRFCQNHEHTKLAKWLNTNSKLNPFRPDPPVGGSPFLHGIGEEDKPVYIPQD
HHHHHHHHHHHHCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEECCCC
VRVGHTFVVGTTRVGKTRLASILINQDIRNGDAVIVVDPKGDQDLVRDMMAACKVSGRTE
CCCCCEEEEECCCCCHHHHHHHHHHCCCCCCCEEEEECCCCCHHHHHHHHHHHHCCCCCC
DFKIVHLGFPEQSAQYNPLKNFDQISEVATRITDAISAEGEGKQFAAFAWKYVNIVAICL
CEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHH
EEMNQPLTYQTIAFYISRLEQLLMSYADKILPNHYPNYHQEIDEIIEEHDSKIGKNNKTK
HHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCCCCC
SPMERHQAVIQYVKNHINKTIKNNNAEALHDQILIDLYDAAIMDKHYYDKITANVGPVLS
CHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
EINKSNASKILSSKAQPGEIELMDVIKNKKVLYIGLDSLTNPNIAQAVGKAFLSDLVSTA
HHHHHHHHHHHHCCCCCCCCHHHHHHCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHH
GKIYKEPNARYTLNLHCDELSEIIQDSFVKILNKAGGAGFQVTAYAQTIQDMEVALGSRA
HHHHCCCCCEEEEEECHHHHHHHHHHHHHHHHHHCCCCCEEEEHHHHHHHHHHHHHCCCC
KAEVSEGNFNTLIMLRVKNEETANLLVKVLPQVGVVGHTQVSMVNDTPHGDDGVYFNTTN
CCCCCCCCCCEEEEEEECCCHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCCCEEEECCC
EDRVQTSSVPMVGVDDIISLPKGQAFMIVNGGELYKTRIPLPISCKKQTKTPLPIFSTYI
CCCCEECCCCCCCHHHHHCCCCCCEEEEEECCCEEEEECCCCCCCCCCCCCCCHHHHHHH
NRTI
HCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA