Click here to switch to the map view.

The map label for this gene is 148360350

Identifier: 148360350

GI number: 148360350

Start: 1198875

End: 1200134

Strand: Reverse

Name: 148360350

Synonym: LPC_2288

Alternate gene names: NA

Gene position: 1200134-1198875 (Counterclockwise)

Preceding gene: 148360349

Following gene: 148360351

Centisome position: 33.56

GC content: 44.37

Gene sequence:

>1260_bases
ATGAACAAAAACAAAGGCATTAAAATCTTAGCTGGATCGGTGGTGTTCGCAGTCGTCATGATTCTTATCAATAGCCGTCA
TAGTACGCCTGTCCATGATGATACGCCCAATCCCAACAATTTTCATGAAGCCATTACCAGCCAATTCAACGACAACATCC
GTGATGTGTCTGCAAGACTTCTGGAAACAGAAAAGAAACTGGAACAAATGCACAAGGAGAATAAATCGCTGCAAAAACAA
TTAAAACAACCGATACAAGAAGCAAGCCATACACTACAAGATGAATTGCAAACACTGAAAGAAAAGCTCTCAGCCCTTAC
TGATCATCAAACTCAATCCTACCCCATGGAGGGCAATCAAGCTCCTGTATCTGGCCAAATCAAAGATCTGGATGGATTAC
TGGATAAAGCTCCTATTGAGAGCAAAGTCTTTGCAGAACAAGATACCTCAACCAAAGAAGAAGCCCCAACCAAAACGCCC
TTCTATACCATTCCAGCAGGCAGTGATTTCAGTAAAGTCACGCTGTTGTCCGCCTTAATGGGTGAAGTACCTGTTGAAGG
CAAACTGATGCAGCCTTTGTTTCCCTTTACCGCAATGGTCAGCCGTGGGGACTTAATGACAGCCAATGGGATGCAATTGC
CGGAAGAAATTATAGGTATGAAAATCAGTGGTTACTCGATTGGCGTAGGTTCTTTTCTCGATAACATCAGCTGCGTTCGC
GCGTATGTCACTGCCGCTTTATTTGTCTTTGAGGATGGGAATTTTGTCAGTATCGGCCAAGAGCAAATGAAAAGCTCTGC
GGAGCTGGTGAACAATGACAGCATTGGTTATCTGACTACTCAATTCGGCAATCCTTGCATTAAAGGACAGTACATCACTA
ATGCCCCCAGAGTTTTAGCTGCTTTCATGGCTGCTGGCGGTATTCAGGGGGCAGGCAATGCTTTATCCAAATGGCAAATG
AGTTATCAAGCCGAAGGCGGTTCTGCGATTGCCACGCCTACGGGTGATTTAGCGCATTTTGCCGCTGGCGGCGCTATCAA
CGAGGGTAGCCAAAAAATTACTGATTGGCTTGAGAAAAGGATACAAGGCAGCTTCGATATGGTTTTTGTTCCTGCCAGCA
TCCGCAGTCATTCAGGCTTTATACCAAACCAATTCAGTCTTCATTTCAGTCAAACCATAGCCATTGATAAAGAACACCAA
GGGAGGGTATTAGATTATGGTTACCATCAACAAAAGAACTTTGACAATGCTTTGCGCTAG

Upstream 100 bases:

>100_bases
GGGAATTGCCTCCACGAAATCAACATGAAAGCACCACCGTCTTTTTGGTTTCAGATCAACCCTTTGCCACAGCACTTACT
CAACATGCGAGGTACAGCCG

Downstream 100 bases:

>100_bases
TCTGGCTTTGAGCGCTTGTTCAACCGCCAATATATCGCAAAGCGCCATTCCTGAGCAGGGCTTAACTGTCAGCCAGCTCT
ATCAGCAAAGCATGCAGCAG

Product: membrane protein

Products: NA

Alternate protein names: Exported Protein

Number of amino acids: Translated: 419; Mature: 419

Protein sequence:

>419_residues
MNKNKGIKILAGSVVFAVVMILINSRHSTPVHDDTPNPNNFHEAITSQFNDNIRDVSARLLETEKKLEQMHKENKSLQKQ
LKQPIQEASHTLQDELQTLKEKLSALTDHQTQSYPMEGNQAPVSGQIKDLDGLLDKAPIESKVFAEQDTSTKEEAPTKTP
FYTIPAGSDFSKVTLLSALMGEVPVEGKLMQPLFPFTAMVSRGDLMTANGMQLPEEIIGMKISGYSIGVGSFLDNISCVR
AYVTAALFVFEDGNFVSIGQEQMKSSAELVNNDSIGYLTTQFGNPCIKGQYITNAPRVLAAFMAAGGIQGAGNALSKWQM
SYQAEGGSAIATPTGDLAHFAAGGAINEGSQKITDWLEKRIQGSFDMVFVPASIRSHSGFIPNQFSLHFSQTIAIDKEHQ
GRVLDYGYHQQKNFDNALR

Sequences:

>Translated_419_residues
MNKNKGIKILAGSVVFAVVMILINSRHSTPVHDDTPNPNNFHEAITSQFNDNIRDVSARLLETEKKLEQMHKENKSLQKQ
LKQPIQEASHTLQDELQTLKEKLSALTDHQTQSYPMEGNQAPVSGQIKDLDGLLDKAPIESKVFAEQDTSTKEEAPTKTP
FYTIPAGSDFSKVTLLSALMGEVPVEGKLMQPLFPFTAMVSRGDLMTANGMQLPEEIIGMKISGYSIGVGSFLDNISCVR
AYVTAALFVFEDGNFVSIGQEQMKSSAELVNNDSIGYLTTQFGNPCIKGQYITNAPRVLAAFMAAGGIQGAGNALSKWQM
SYQAEGGSAIATPTGDLAHFAAGGAINEGSQKITDWLEKRIQGSFDMVFVPASIRSHSGFIPNQFSLHFSQTIAIDKEHQ
GRVLDYGYHQQKNFDNALR
>Mature_419_residues
MNKNKGIKILAGSVVFAVVMILINSRHSTPVHDDTPNPNNFHEAITSQFNDNIRDVSARLLETEKKLEQMHKENKSLQKQ
LKQPIQEASHTLQDELQTLKEKLSALTDHQTQSYPMEGNQAPVSGQIKDLDGLLDKAPIESKVFAEQDTSTKEEAPTKTP
FYTIPAGSDFSKVTLLSALMGEVPVEGKLMQPLFPFTAMVSRGDLMTANGMQLPEEIIGMKISGYSIGVGSFLDNISCVR
AYVTAALFVFEDGNFVSIGQEQMKSSAELVNNDSIGYLTTQFGNPCIKGQYITNAPRVLAAFMAAGGIQGAGNALSKWQM
SYQAEGGSAIATPTGDLAHFAAGGAINEGSQKITDWLEKRIQGSFDMVFVPASIRSHSGFIPNQFSLHFSQTIAIDKEHQ
GRVLDYGYHQQKNFDNALR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 45824; Mature: 45824

Theoretical pI: Translated: 5.97; Mature: 5.97

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNKNKGIKILAGSVVFAVVMILINSRHSTPVHDDTPNPNNFHEAITSQFNDNIRDVSARL
CCCCCCEEEEEHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHCCCHHHHHHHH
LETEKKLEQMHKENKSLQKQLKQPIQEASHTLQDELQTLKEKLSALTDHQTQSYPMEGNQ
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC
APVSGQIKDLDGLLDKAPIESKVFAEQDTSTKEEAPTKTPFYTIPAGSDFSKVTLLSALM
CCCCCCHHHHHHHHHCCCCCHHHHCCCCCCCHHCCCCCCCEEECCCCCCHHHHHHHHHHH
GEVPVEGKLMQPLFPFTAMVSRGDLMTANGMQLPEEIIGMKISGYSIGVGSFLDNISCVR
HCCCCCCCHHHHHHHHHHHHHCCCEEECCCCCCCHHHHCEEECCCEECHHHHHHHHHHHH
AYVTAALFVFEDGNFVSIGQEQMKSSAELVNNDSIGYLTTQFGNPCIKGQYITNAPRVLA
HHHHHHEEEEECCCEEECCHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCEECCCHHHHH
AFMAAGGIQGAGNALSKWQMSYQAEGGSAIATPTGDLAHFAAGGAINEGSQKITDWLEKR
HHHHHCCCCCCCCHHHHHHHHEECCCCCEEECCCCCHHHHHCCCCCCCCHHHHHHHHHHH
IQGSFDMVFVPASIRSHSGFIPNQFSLHFSQTIAIDKEHQGRVLDYGYHQQKNFDNALR
HCCCCCEEEEECCCCCCCCCCCCCEEEEEEEEEEECCCCCCCEEECCCCHHCCCHHHCC
>Mature Secondary Structure
MNKNKGIKILAGSVVFAVVMILINSRHSTPVHDDTPNPNNFHEAITSQFNDNIRDVSARL
CCCCCCEEEEEHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHCCCHHHHHHHH
LETEKKLEQMHKENKSLQKQLKQPIQEASHTLQDELQTLKEKLSALTDHQTQSYPMEGNQ
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC
APVSGQIKDLDGLLDKAPIESKVFAEQDTSTKEEAPTKTPFYTIPAGSDFSKVTLLSALM
CCCCCCHHHHHHHHHCCCCCHHHHCCCCCCCHHCCCCCCCEEECCCCCCHHHHHHHHHHH
GEVPVEGKLMQPLFPFTAMVSRGDLMTANGMQLPEEIIGMKISGYSIGVGSFLDNISCVR
HCCCCCCCHHHHHHHHHHHHHCCCEEECCCCCCCHHHHCEEECCCEECHHHHHHHHHHHH
AYVTAALFVFEDGNFVSIGQEQMKSSAELVNNDSIGYLTTQFGNPCIKGQYITNAPRVLA
HHHHHHEEEEECCCEEECCHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCEECCCHHHHH
AFMAAGGIQGAGNALSKWQMSYQAEGGSAIATPTGDLAHFAAGGAINEGSQKITDWLEKR
HHHHHCCCCCCCCHHHHHHHHEECCCCCEEECCCCCHHHHHCCCCCCCCHHHHHHHHHHH
IQGSFDMVFVPASIRSHSGFIPNQFSLHFSQTIAIDKEHQGRVLDYGYHQQKNFDNALR
HCCCCCEEEEECCCCCCCCCCCCCEEEEEEEEEEECCCCCCCEEECCCCHHCCCHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA