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The map label for this gene is 148360246

Identifier: 148360246

GI number: 148360246

Start: 1298409

End: 1299845

Strand: Reverse

Name: 148360246

Synonym: LPC_2181

Alternate gene names: NA

Gene position: 1299845-1298409 (Counterclockwise)

Preceding gene: 148360245

Following gene: 148360247

Centisome position: 36.34

GC content: 43.22

Gene sequence:

>1437_bases
ATGAATTCGAATCAAATATATCATGTCGATTTTAAACAGTCTAAACGTATTAAATCGTTTCCCTATGCTGGTGGAAGCTT
TCAATTAACCTCAGATGGGGTAATTTTTATCGGTAAAGATAAAGATAATAATGAGCTTCCTCCTCGATGGATCTGCTCTT
CTTTGTCTGTGGTAGCTAAAACTCGTGATGCCAATAGTGGGGAATGGGGTCGATTGCTTGAATGGGTCGATGATGATGGA
GTTAAACATCAATGGGCGATGCCTTTGGCTTTATTGCAAGGGGATTCAAGTGATGTGAGGCGAGAACTGGCACGATTGGG
GTTGACTATATCACCTAGTAAATCTGCTCGTGATTTATTAGCTTCTTATATCCAAGTTTTTCCAGTCGAAGAGCGAGCTC
GTTGTGTTGATAAACTGGGTTGGTATAAAGACGTATTTGTTACTGCTAATGAAGCCATAGGGCAATCCAGTGACCAAATC
GTTTTTCAAAACGCGAATAGTCTTGAACCCGCACTGTCTGTTGCGGGCAGTTTAGAGGACTGGCGAAATTCTATCGCACG
ATTGGCAGATGGTAATTCTCGCTTGGTATTTGCTATTTCCGCAGCCTTTGCACCAAGCCTTACCAATCTTGTTGGTGAGG
ACTCAGGGGGCTTTCATTTCAGAGGGGCATCTTCTTCTGGAAAAACAACCGCTTTAAAAGTAGCGGCTTCTGTTTGGGGT
AAGCCAGATAGTTATATCCGTTTGTGGCGAATTACAGCGAATGGGTTAGAAGGATTGGCAGCCCTGCATAATGATGGATT
ATTAATCCTCGATGAGTTGAGTCAGATGGATCCCAAAGAAGCTGGTGAGTGTGCTTATCTACTTGCAAATGGTCAAGGTA
AGACAAGAGCCTCTCGTTGTGGTACGGCAAGACAATCCATGCGTTGGTCATTACTCTTTTTATCAGCCGGGGAGGAGTCA
TTAACCTCGTTAATGGCCAAAGCAGGACAACGATGTAATGCAGGTCAAGAAATACGTTTAGCCGATATTGAAGCAGACGC
TGGTGTAAAGATGGGGTTATTTGAACAATTACATGATCATATAAACCCAGCCTCCATGTCACTTTCGTTAAAAGAGGCAG
CCAGTCAATGCCATGGTGCTGTTGGTGTAGCATGGCTCCATAAAATTGTGAAACACCGAGCAGAGTTAATCTCCCTACTC
ACCAATAAAATCCAGCAATTTGTAACTAAAGTCACAAAGCCCGAACATTCAGGTCAAATTCAACGAGTAGCAAGACGTTT
TGCTTTGGTTGCTATGGCTGGTGAATTAGCGACTCACTATGAACTGACTGGATGGAAATCGGGTGCTGCATGTCAAGCAG
CAGAAAAGTGCTTTAACACCTGGCTAGAAGATTTTGGAGAACATGGAAATCGAGAAGATCGAGCCATATTGTCATAA

Upstream 100 bases:

>100_bases
CGTCCTTAAAGAAGCTGTTTAGCACTTTCTTAACCTAGGTCTTATTGATTAATTGGAAGGTGGTGCAACACCTTCCGGTA
TAGTTGTTGGAGATAAAGAA

Downstream 100 bases:

>100_bases
GTTCGTGCATTCTTTGAAAAAGAAGGAGCAAGTCGGTTTGAAAGCGAAAATCATCCTAATAGTGAACGACTTTACAATCG
AGCTGGTTTTTATCGAACTG

Product: hypothetical protein

Products: NA

Alternate protein names: Prophage Primase; Superfamily II Helicase; Bifunctional DNA Primase/Polymerase; DNA/RNA Helicase; DNA Helicase Inner Membrane Protein; Conserved Domain Protein; Inner Membrane; Zinc Finger CHC2-Family Protein; Primase C 2 Family; Inner Membrane Protein Phage Origin; Pathogenicity Island Protein; DNA Primase TraC

Number of amino acids: Translated: 478; Mature: 478

Protein sequence:

>478_residues
MNSNQIYHVDFKQSKRIKSFPYAGGSFQLTSDGVIFIGKDKDNNELPPRWICSSLSVVAKTRDANSGEWGRLLEWVDDDG
VKHQWAMPLALLQGDSSDVRRELARLGLTISPSKSARDLLASYIQVFPVEERARCVDKLGWYKDVFVTANEAIGQSSDQI
VFQNANSLEPALSVAGSLEDWRNSIARLADGNSRLVFAISAAFAPSLTNLVGEDSGGFHFRGASSSGKTTALKVAASVWG
KPDSYIRLWRITANGLEGLAALHNDGLLILDELSQMDPKEAGECAYLLANGQGKTRASRCGTARQSMRWSLLFLSAGEES
LTSLMAKAGQRCNAGQEIRLADIEADAGVKMGLFEQLHDHINPASMSLSLKEAASQCHGAVGVAWLHKIVKHRAELISLL
TNKIQQFVTKVTKPEHSGQIQRVARRFALVAMAGELATHYELTGWKSGAACQAAEKCFNTWLEDFGEHGNREDRAILS

Sequences:

>Translated_478_residues
MNSNQIYHVDFKQSKRIKSFPYAGGSFQLTSDGVIFIGKDKDNNELPPRWICSSLSVVAKTRDANSGEWGRLLEWVDDDG
VKHQWAMPLALLQGDSSDVRRELARLGLTISPSKSARDLLASYIQVFPVEERARCVDKLGWYKDVFVTANEAIGQSSDQI
VFQNANSLEPALSVAGSLEDWRNSIARLADGNSRLVFAISAAFAPSLTNLVGEDSGGFHFRGASSSGKTTALKVAASVWG
KPDSYIRLWRITANGLEGLAALHNDGLLILDELSQMDPKEAGECAYLLANGQGKTRASRCGTARQSMRWSLLFLSAGEES
LTSLMAKAGQRCNAGQEIRLADIEADAGVKMGLFEQLHDHINPASMSLSLKEAASQCHGAVGVAWLHKIVKHRAELISLL
TNKIQQFVTKVTKPEHSGQIQRVARRFALVAMAGELATHYELTGWKSGAACQAAEKCFNTWLEDFGEHGNREDRAILS
>Mature_478_residues
MNSNQIYHVDFKQSKRIKSFPYAGGSFQLTSDGVIFIGKDKDNNELPPRWICSSLSVVAKTRDANSGEWGRLLEWVDDDG
VKHQWAMPLALLQGDSSDVRRELARLGLTISPSKSARDLLASYIQVFPVEERARCVDKLGWYKDVFVTANEAIGQSSDQI
VFQNANSLEPALSVAGSLEDWRNSIARLADGNSRLVFAISAAFAPSLTNLVGEDSGGFHFRGASSSGKTTALKVAASVWG
KPDSYIRLWRITANGLEGLAALHNDGLLILDELSQMDPKEAGECAYLLANGQGKTRASRCGTARQSMRWSLLFLSAGEES
LTSLMAKAGQRCNAGQEIRLADIEADAGVKMGLFEQLHDHINPASMSLSLKEAASQCHGAVGVAWLHKIVKHRAELISLL
TNKIQQFVTKVTKPEHSGQIQRVARRFALVAMAGELATHYELTGWKSGAACQAAEKCFNTWLEDFGEHGNREDRAILS

Specific function: Unknown

COG id: COG5519

COG function: function code L; Superfamily II helicase and inactivated derivatives

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 52237; Mature: 52237

Theoretical pI: Translated: 7.33; Mature: 7.33

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNSNQIYHVDFKQSKRIKSFPYAGGSFQLTSDGVIFIGKDKDNNELPPRWICSSLSVVAK
CCCCEEEEEECHHCCCCCCCCCCCCCEEEECCCEEEEECCCCCCCCCHHHHHHHHHHHHC
TRDANSGEWGRLLEWVDDDGVKHQWAMPLALLQGDSSDVRRELARLGLTISPSKSARDLL
CCCCCCCCHHHHHHHHCCCCCCCHHHCCHHEECCCCHHHHHHHHHCCCEECCCHHHHHHH
ASYIQVFPVEERARCVDKLGWYKDVFVTANEAIGQSSDQIVFQNANSLEPALSVAGSLED
HHHHHHCCCHHHHHHHHHHCCHHHEEEEECHHHCCCCCCEEEECCCCCCHHHHHHCCHHH
WRNSIARLADGNSRLVFAISAAFAPSLTNLVGEDSGGFHFRGASSSGKTTALKVAASVWG
HHHHHHHHCCCCCEEEEEEECHHHHHHHHHHCCCCCCEEEECCCCCCCHHHHHHHHHHCC
KPDSYIRLWRITANGLEGLAALHNDGLLILDELSQMDPKEAGECAYLLANGQGKTRASRC
CCCCEEEEEEEECCCHHHHHHHCCCCEEEEEHHHCCCCCCCCCEEEEEECCCCCCHHHHH
GTARQSMRWSLLFLSAGEESLTSLMAKAGQRCNAGQEIRLADIEADAGVKMGLFEQLHDH
HHHHHCCEEEEEEEECCHHHHHHHHHHCCCCCCCCCEEEEEEECCCCCCHHHHHHHHHHC
INPASMSLSLKEAASQCHGAVGVAWLHKIVKHRAELISLLTNKIQQFVTKVTKPEHSGQI
CCHHHHEEEHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHH
QRVARRFALVAMAGELATHYELTGWKSGAACQAAEKCFNTWLEDFGEHGNREDRAILS
HHHHHHHHHHHHHHHHHHCEEECCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCC
>Mature Secondary Structure
MNSNQIYHVDFKQSKRIKSFPYAGGSFQLTSDGVIFIGKDKDNNELPPRWICSSLSVVAK
CCCCEEEEEECHHCCCCCCCCCCCCCEEEECCCEEEEECCCCCCCCCHHHHHHHHHHHHC
TRDANSGEWGRLLEWVDDDGVKHQWAMPLALLQGDSSDVRRELARLGLTISPSKSARDLL
CCCCCCCCHHHHHHHHCCCCCCCHHHCCHHEECCCCHHHHHHHHHCCCEECCCHHHHHHH
ASYIQVFPVEERARCVDKLGWYKDVFVTANEAIGQSSDQIVFQNANSLEPALSVAGSLED
HHHHHHCCCHHHHHHHHHHCCHHHEEEEECHHHCCCCCCEEEECCCCCCHHHHHHCCHHH
WRNSIARLADGNSRLVFAISAAFAPSLTNLVGEDSGGFHFRGASSSGKTTALKVAASVWG
HHHHHHHHCCCCCEEEEEEECHHHHHHHHHHCCCCCCEEEECCCCCCCHHHHHHHHHHCC
KPDSYIRLWRITANGLEGLAALHNDGLLILDELSQMDPKEAGECAYLLANGQGKTRASRC
CCCCEEEEEEEECCCHHHHHHHCCCCEEEEEHHHCCCCCCCCCEEEEEECCCCCCHHHHH
GTARQSMRWSLLFLSAGEESLTSLMAKAGQRCNAGQEIRLADIEADAGVKMGLFEQLHDH
HHHHHCCEEEEEEEECCHHHHHHHHHHCCCCCCCCCEEEEEEECCCCCCHHHHHHHHHHC
INPASMSLSLKEAASQCHGAVGVAWLHKIVKHRAELISLLTNKIQQFVTKVTKPEHSGQI
CCHHHHEEEHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHH
QRVARRFALVAMAGELATHYELTGWKSGAACQAAEKCFNTWLEDFGEHGNREDRAILS
HHHHHHHHHHHHHHHHHHCEEECCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA