Definition | Legionella pneumophila str. Corby chromosome, complete genome. |
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Accession | NC_009494 |
Length | 3,576,470 |
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The map label for this gene is ribA [H]
Identifier: 148359785
GI number: 148359785
Start: 2655133
End: 2656401
Strand: Direct
Name: ribA [H]
Synonym: LPC_1710
Alternate gene names: 148359785
Gene position: 2655133-2656401 (Clockwise)
Preceding gene: 148359784
Following gene: 148359786
Centisome position: 74.24
GC content: 44.92
Gene sequence:
>1269_bases ATGTTACCAGATGATTCAAAGAAAAAATCAAAAGGACACATTGTCTTGTCTTCACACCCGGCAAGCCATACACAAGCACC ATTAAAAATCAAATGGGGTGAAAAAAACCCTAAAGAGAGGGGACCTGTTATTGCCTCTCTCACCAATATCAAAAATCGAA ATGCAGTTGGAACTCACTCAGGGTCTTACTCTGTTTACAGGGCCTTGGCAGTGGCAGCTGGTCTGCTGGATCCCGAACAC GTTCCTGATCTAACCGACACCCTGCCCCCTGTTAACATAGGGCCTCATAGGCAATGGGGTGAAGCAGGTAAAATTGTCTC CCTCGATCCCTGGGGGCATCTTGTAGCTTCTGTTTTCTCAGAGGAAATAAAAGCCGGGTATGACATCAGACCAACCATTG CCGTCACAAGGGCACATATTAATATCCCGGAATTGCATATCGCCATGCAAAAAGGCAGATTAAAACCTGATGGAAAAATT TTAAGTGAAACAGGGGATGTCGTGGTGACTAAGGCCGCGATTGAACCAGTATGGTACTTGCCTGGAATTGCGGAACGCTT TCAGGTTTCAGAAGCATTGCTCAGACGCACTCTTTTTGAACAAACAGCTGGAATGTTCCCAGAACTGGTGACCCGGAGCG ACTTGGATGTCTTTTTGCCACCCATTGGGGGATTAACTGCTTATTTCTTTGGTGATGTGACTACCATCCATAATCCGGAA ATCGAATTAACTTGCCGTATCCATGATGAATGTAATGGCTCCGATGTCTTTGGTTCTGACATATGCACCTGCAGGCCATA TTTGGTCCATGGAATCGAATTATCCATCGAATCCGCACAAAAAGGAGGCGCAGGCCTTATCGTTTATAATCGCAAAGAAG GAAGAGCTCTTGGGGAGGTCACTAAATTTCTGGTTTATAACGCCAGAAAAAGACAGAAAGGTGGTGACACTGCCGCCAAG TACTTTGAAAGAACGGAATGCGTTGCCGGTGTTCAGGATATGCGTTTCCAGGAATTAATGTCCGATATTCTTCATTGGCT GGGGATCACTAAAATTCATCGCTTCGTTTCAATGTCCAATATGAAATACGATGCCTTGCTCAAATCTGGAATCAATGTTA TTGAACGGGTAAAAATACCGGATGAGTTGATTCCTCCAGATGCCCGGGTAGAAATAGATGCCAAGCGTGCAGCAGGATAT TACTCACCCGAAGGAATTATTGATATCAACGAATTGGCTAAACCGAAAGGACGTGCCCTTCATGAATAA
Upstream 100 bases:
>100_bases TAGACAGTTTATAACAACAGTGTGCACCTGCTTATAAAGGGATAAAAGATAAAACAACCGATTTATTTGAGCACCGTTGA AACAAAAGGAATTAAGTATC
Downstream 100 bases:
>100_bases TCAAGAGCAGCAAATACAAAATGTTTTGAATACACTTCGTGATCCTCGCACCATACGAACCCGGTCGCATCGTATTTTAA ACCTGGCAAAACAGAATCAG
Product: hypothetical protein
Products: NA
Alternate protein names: GTP cyclohydrolase II [H]
Number of amino acids: Translated: 422; Mature: 422
Protein sequence:
>422_residues MLPDDSKKKSKGHIVLSSHPASHTQAPLKIKWGEKNPKERGPVIASLTNIKNRNAVGTHSGSYSVYRALAVAAGLLDPEH VPDLTDTLPPVNIGPHRQWGEAGKIVSLDPWGHLVASVFSEEIKAGYDIRPTIAVTRAHINIPELHIAMQKGRLKPDGKI LSETGDVVVTKAAIEPVWYLPGIAERFQVSEALLRRTLFEQTAGMFPELVTRSDLDVFLPPIGGLTAYFFGDVTTIHNPE IELTCRIHDECNGSDVFGSDICTCRPYLVHGIELSIESAQKGGAGLIVYNRKEGRALGEVTKFLVYNARKRQKGGDTAAK YFERTECVAGVQDMRFQELMSDILHWLGITKIHRFVSMSNMKYDALLKSGINVIERVKIPDELIPPDARVEIDAKRAAGY YSPEGIIDINELAKPKGRALHE
Sequences:
>Translated_422_residues MLPDDSKKKSKGHIVLSSHPASHTQAPLKIKWGEKNPKERGPVIASLTNIKNRNAVGTHSGSYSVYRALAVAAGLLDPEH VPDLTDTLPPVNIGPHRQWGEAGKIVSLDPWGHLVASVFSEEIKAGYDIRPTIAVTRAHINIPELHIAMQKGRLKPDGKI LSETGDVVVTKAAIEPVWYLPGIAERFQVSEALLRRTLFEQTAGMFPELVTRSDLDVFLPPIGGLTAYFFGDVTTIHNPE IELTCRIHDECNGSDVFGSDICTCRPYLVHGIELSIESAQKGGAGLIVYNRKEGRALGEVTKFLVYNARKRQKGGDTAAK YFERTECVAGVQDMRFQELMSDILHWLGITKIHRFVSMSNMKYDALLKSGINVIERVKIPDELIPPDARVEIDAKRAAGY YSPEGIIDINELAKPKGRALHE >Mature_422_residues MLPDDSKKKSKGHIVLSSHPASHTQAPLKIKWGEKNPKERGPVIASLTNIKNRNAVGTHSGSYSVYRALAVAAGLLDPEH VPDLTDTLPPVNIGPHRQWGEAGKIVSLDPWGHLVASVFSEEIKAGYDIRPTIAVTRAHINIPELHIAMQKGRLKPDGKI LSETGDVVVTKAAIEPVWYLPGIAERFQVSEALLRRTLFEQTAGMFPELVTRSDLDVFLPPIGGLTAYFFGDVTTIHNPE IELTCRIHDECNGSDVFGSDICTCRPYLVHGIELSIESAQKGGAGLIVYNRKEGRALGEVTKFLVYNARKRQKGGDTAAK YFERTECVAGVQDMRFQELMSDILHWLGITKIHRFVSMSNMKYDALLKSGINVIERVKIPDELIPPDARVEIDAKRAAGY YSPEGIIDINELAKPKGRALHE
Specific function: Catalyzes the conversion of GTP to 2,5-diamino-6- ribosylamino-4(3H)-pyrimidinone 5'-phosphate (DARP), formate and pyrophosphate [H]
COG id: COG0807
COG function: function code H; GTP cyclohydrolase II
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the GTP cyclohydrolase II family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000926 [H]
Pfam domain/function: PF00925 GTP_cyclohydro2 [H]
EC number: =3.5.4.25 [H]
Molecular weight: Translated: 46577; Mature: 46577
Theoretical pI: Translated: 7.71; Mature: 7.71
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLPDDSKKKSKGHIVLSSHPASHTQAPLKIKWGEKNPKERGPVIASLTNIKNRNAVGTHS CCCCCCCCCCCCEEEEECCCCCCCCCCEEEECCCCCCHHHCCEEEEECCCCCCCCCCCCC GSYSVYRALAVAAGLLDPEHVPDLTDTLPPVNIGPHRQWGEAGKIVSLDPWGHLVASVFS CCHHHHHHHHHHHHCCCCCCCCCHHHCCCCCCCCCCCCCCCCCCEEEECCHHHHHHHHHH EEIKAGYDIRPTIAVTRAHINIPELHIAMQKGRLKPDGKILSETGDVVVTKAAIEPVWYL HHHHCCCCCCCEEEEEEEECCCCHHEEEHHCCCCCCCCCEECCCCCEEEEEHHCCCEEEC PGIAERFQVSEALLRRTLFEQTAGMFPELVTRSDLDVFLPPIGGLTAYFFGDVTTIHNPE CCHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCCCCEEECCCCCHHHHHHCCEEEEECCC IELTCRIHDECNGSDVFGSDICTCRPYLVHGIELSIESAQKGGAGLIVYNRKEGRALGEV EEEEEEECCCCCCCCCCCCCCCCCCHHHHEEEEEEEECCCCCCCEEEEEECCCCCHHHHH TKFLVYNARKRQKGGDTAAKYFERTECVAGVQDMRFQELMSDILHWLGITKIHRFVSMSN HHHHHHCCHHHCCCCCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC MKYDALLKSGINVIERVKIPDELIPPDARVEIDAKRAAGYYSPEGIIDINELAKPKGRAL CHHHHHHHHHHHHHHHCCCCHHHCCCCCEEEEEHHHCCCCCCCCCCEEHHHHCCCCCCCC HE CC >Mature Secondary Structure MLPDDSKKKSKGHIVLSSHPASHTQAPLKIKWGEKNPKERGPVIASLTNIKNRNAVGTHS CCCCCCCCCCCCEEEEECCCCCCCCCCEEEECCCCCCHHHCCEEEEECCCCCCCCCCCCC GSYSVYRALAVAAGLLDPEHVPDLTDTLPPVNIGPHRQWGEAGKIVSLDPWGHLVASVFS CCHHHHHHHHHHHHCCCCCCCCCHHHCCCCCCCCCCCCCCCCCCEEEECCHHHHHHHHHH EEIKAGYDIRPTIAVTRAHINIPELHIAMQKGRLKPDGKILSETGDVVVTKAAIEPVWYL HHHHCCCCCCCEEEEEEEECCCCHHEEEHHCCCCCCCCCEECCCCCEEEEEHHCCCEEEC PGIAERFQVSEALLRRTLFEQTAGMFPELVTRSDLDVFLPPIGGLTAYFFGDVTTIHNPE CCHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCCCCEEECCCCCHHHHHHCCEEEEECCC IELTCRIHDECNGSDVFGSDICTCRPYLVHGIELSIESAQKGGAGLIVYNRKEGRALGEV EEEEEEECCCCCCCCCCCCCCCCCCHHHHEEEEEEEECCCCCCCEEEEEECCCCCHHHHH TKFLVYNARKRQKGGDTAAKYFERTECVAGVQDMRFQELMSDILHWLGITKIHRFVSMSN HHHHHHCCHHHCCCCCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC MKYDALLKSGINVIERVKIPDELIPPDARVEIDAKRAAGYYSPEGIIDINELAKPKGRAL CHHHHHHHHHHHHHHHCCCCHHHCCCCCEEEEEHHHCCCCCCCCCCEEHHHHCCCCCCCC HE CC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA