Definition Legionella pneumophila str. Corby chromosome, complete genome.
Accession NC_009494
Length 3,576,470

Click here to switch to the map view.

The map label for this gene is ribA [H]

Identifier: 148359785

GI number: 148359785

Start: 2655133

End: 2656401

Strand: Direct

Name: ribA [H]

Synonym: LPC_1710

Alternate gene names: 148359785

Gene position: 2655133-2656401 (Clockwise)

Preceding gene: 148359784

Following gene: 148359786

Centisome position: 74.24

GC content: 44.92

Gene sequence:

>1269_bases
ATGTTACCAGATGATTCAAAGAAAAAATCAAAAGGACACATTGTCTTGTCTTCACACCCGGCAAGCCATACACAAGCACC
ATTAAAAATCAAATGGGGTGAAAAAAACCCTAAAGAGAGGGGACCTGTTATTGCCTCTCTCACCAATATCAAAAATCGAA
ATGCAGTTGGAACTCACTCAGGGTCTTACTCTGTTTACAGGGCCTTGGCAGTGGCAGCTGGTCTGCTGGATCCCGAACAC
GTTCCTGATCTAACCGACACCCTGCCCCCTGTTAACATAGGGCCTCATAGGCAATGGGGTGAAGCAGGTAAAATTGTCTC
CCTCGATCCCTGGGGGCATCTTGTAGCTTCTGTTTTCTCAGAGGAAATAAAAGCCGGGTATGACATCAGACCAACCATTG
CCGTCACAAGGGCACATATTAATATCCCGGAATTGCATATCGCCATGCAAAAAGGCAGATTAAAACCTGATGGAAAAATT
TTAAGTGAAACAGGGGATGTCGTGGTGACTAAGGCCGCGATTGAACCAGTATGGTACTTGCCTGGAATTGCGGAACGCTT
TCAGGTTTCAGAAGCATTGCTCAGACGCACTCTTTTTGAACAAACAGCTGGAATGTTCCCAGAACTGGTGACCCGGAGCG
ACTTGGATGTCTTTTTGCCACCCATTGGGGGATTAACTGCTTATTTCTTTGGTGATGTGACTACCATCCATAATCCGGAA
ATCGAATTAACTTGCCGTATCCATGATGAATGTAATGGCTCCGATGTCTTTGGTTCTGACATATGCACCTGCAGGCCATA
TTTGGTCCATGGAATCGAATTATCCATCGAATCCGCACAAAAAGGAGGCGCAGGCCTTATCGTTTATAATCGCAAAGAAG
GAAGAGCTCTTGGGGAGGTCACTAAATTTCTGGTTTATAACGCCAGAAAAAGACAGAAAGGTGGTGACACTGCCGCCAAG
TACTTTGAAAGAACGGAATGCGTTGCCGGTGTTCAGGATATGCGTTTCCAGGAATTAATGTCCGATATTCTTCATTGGCT
GGGGATCACTAAAATTCATCGCTTCGTTTCAATGTCCAATATGAAATACGATGCCTTGCTCAAATCTGGAATCAATGTTA
TTGAACGGGTAAAAATACCGGATGAGTTGATTCCTCCAGATGCCCGGGTAGAAATAGATGCCAAGCGTGCAGCAGGATAT
TACTCACCCGAAGGAATTATTGATATCAACGAATTGGCTAAACCGAAAGGACGTGCCCTTCATGAATAA

Upstream 100 bases:

>100_bases
TAGACAGTTTATAACAACAGTGTGCACCTGCTTATAAAGGGATAAAAGATAAAACAACCGATTTATTTGAGCACCGTTGA
AACAAAAGGAATTAAGTATC

Downstream 100 bases:

>100_bases
TCAAGAGCAGCAAATACAAAATGTTTTGAATACACTTCGTGATCCTCGCACCATACGAACCCGGTCGCATCGTATTTTAA
ACCTGGCAAAACAGAATCAG

Product: hypothetical protein

Products: NA

Alternate protein names: GTP cyclohydrolase II [H]

Number of amino acids: Translated: 422; Mature: 422

Protein sequence:

>422_residues
MLPDDSKKKSKGHIVLSSHPASHTQAPLKIKWGEKNPKERGPVIASLTNIKNRNAVGTHSGSYSVYRALAVAAGLLDPEH
VPDLTDTLPPVNIGPHRQWGEAGKIVSLDPWGHLVASVFSEEIKAGYDIRPTIAVTRAHINIPELHIAMQKGRLKPDGKI
LSETGDVVVTKAAIEPVWYLPGIAERFQVSEALLRRTLFEQTAGMFPELVTRSDLDVFLPPIGGLTAYFFGDVTTIHNPE
IELTCRIHDECNGSDVFGSDICTCRPYLVHGIELSIESAQKGGAGLIVYNRKEGRALGEVTKFLVYNARKRQKGGDTAAK
YFERTECVAGVQDMRFQELMSDILHWLGITKIHRFVSMSNMKYDALLKSGINVIERVKIPDELIPPDARVEIDAKRAAGY
YSPEGIIDINELAKPKGRALHE

Sequences:

>Translated_422_residues
MLPDDSKKKSKGHIVLSSHPASHTQAPLKIKWGEKNPKERGPVIASLTNIKNRNAVGTHSGSYSVYRALAVAAGLLDPEH
VPDLTDTLPPVNIGPHRQWGEAGKIVSLDPWGHLVASVFSEEIKAGYDIRPTIAVTRAHINIPELHIAMQKGRLKPDGKI
LSETGDVVVTKAAIEPVWYLPGIAERFQVSEALLRRTLFEQTAGMFPELVTRSDLDVFLPPIGGLTAYFFGDVTTIHNPE
IELTCRIHDECNGSDVFGSDICTCRPYLVHGIELSIESAQKGGAGLIVYNRKEGRALGEVTKFLVYNARKRQKGGDTAAK
YFERTECVAGVQDMRFQELMSDILHWLGITKIHRFVSMSNMKYDALLKSGINVIERVKIPDELIPPDARVEIDAKRAAGY
YSPEGIIDINELAKPKGRALHE
>Mature_422_residues
MLPDDSKKKSKGHIVLSSHPASHTQAPLKIKWGEKNPKERGPVIASLTNIKNRNAVGTHSGSYSVYRALAVAAGLLDPEH
VPDLTDTLPPVNIGPHRQWGEAGKIVSLDPWGHLVASVFSEEIKAGYDIRPTIAVTRAHINIPELHIAMQKGRLKPDGKI
LSETGDVVVTKAAIEPVWYLPGIAERFQVSEALLRRTLFEQTAGMFPELVTRSDLDVFLPPIGGLTAYFFGDVTTIHNPE
IELTCRIHDECNGSDVFGSDICTCRPYLVHGIELSIESAQKGGAGLIVYNRKEGRALGEVTKFLVYNARKRQKGGDTAAK
YFERTECVAGVQDMRFQELMSDILHWLGITKIHRFVSMSNMKYDALLKSGINVIERVKIPDELIPPDARVEIDAKRAAGY
YSPEGIIDINELAKPKGRALHE

Specific function: Catalyzes the conversion of GTP to 2,5-diamino-6- ribosylamino-4(3H)-pyrimidinone 5'-phosphate (DARP), formate and pyrophosphate [H]

COG id: COG0807

COG function: function code H; GTP cyclohydrolase II

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the GTP cyclohydrolase II family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000926 [H]

Pfam domain/function: PF00925 GTP_cyclohydro2 [H]

EC number: =3.5.4.25 [H]

Molecular weight: Translated: 46577; Mature: 46577

Theoretical pI: Translated: 7.71; Mature: 7.71

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLPDDSKKKSKGHIVLSSHPASHTQAPLKIKWGEKNPKERGPVIASLTNIKNRNAVGTHS
CCCCCCCCCCCCEEEEECCCCCCCCCCEEEECCCCCCHHHCCEEEEECCCCCCCCCCCCC
GSYSVYRALAVAAGLLDPEHVPDLTDTLPPVNIGPHRQWGEAGKIVSLDPWGHLVASVFS
CCHHHHHHHHHHHHCCCCCCCCCHHHCCCCCCCCCCCCCCCCCCEEEECCHHHHHHHHHH
EEIKAGYDIRPTIAVTRAHINIPELHIAMQKGRLKPDGKILSETGDVVVTKAAIEPVWYL
HHHHCCCCCCCEEEEEEEECCCCHHEEEHHCCCCCCCCCEECCCCCEEEEEHHCCCEEEC
PGIAERFQVSEALLRRTLFEQTAGMFPELVTRSDLDVFLPPIGGLTAYFFGDVTTIHNPE
CCHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCCCCEEECCCCCHHHHHHCCEEEEECCC
IELTCRIHDECNGSDVFGSDICTCRPYLVHGIELSIESAQKGGAGLIVYNRKEGRALGEV
EEEEEEECCCCCCCCCCCCCCCCCCHHHHEEEEEEEECCCCCCCEEEEEECCCCCHHHHH
TKFLVYNARKRQKGGDTAAKYFERTECVAGVQDMRFQELMSDILHWLGITKIHRFVSMSN
HHHHHHCCHHHCCCCCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
MKYDALLKSGINVIERVKIPDELIPPDARVEIDAKRAAGYYSPEGIIDINELAKPKGRAL
CHHHHHHHHHHHHHHHCCCCHHHCCCCCEEEEEHHHCCCCCCCCCCEEHHHHCCCCCCCC
HE
CC
>Mature Secondary Structure
MLPDDSKKKSKGHIVLSSHPASHTQAPLKIKWGEKNPKERGPVIASLTNIKNRNAVGTHS
CCCCCCCCCCCCEEEEECCCCCCCCCCEEEECCCCCCHHHCCEEEEECCCCCCCCCCCCC
GSYSVYRALAVAAGLLDPEHVPDLTDTLPPVNIGPHRQWGEAGKIVSLDPWGHLVASVFS
CCHHHHHHHHHHHHCCCCCCCCCHHHCCCCCCCCCCCCCCCCCCEEEECCHHHHHHHHHH
EEIKAGYDIRPTIAVTRAHINIPELHIAMQKGRLKPDGKILSETGDVVVTKAAIEPVWYL
HHHHCCCCCCCEEEEEEEECCCCHHEEEHHCCCCCCCCCEECCCCCEEEEEHHCCCEEEC
PGIAERFQVSEALLRRTLFEQTAGMFPELVTRSDLDVFLPPIGGLTAYFFGDVTTIHNPE
CCHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCCCCEEECCCCCHHHHHHCCEEEEECCC
IELTCRIHDECNGSDVFGSDICTCRPYLVHGIELSIESAQKGGAGLIVYNRKEGRALGEV
EEEEEEECCCCCCCCCCCCCCCCCCHHHHEEEEEEEECCCCCCCEEEEEECCCCCHHHHH
TKFLVYNARKRQKGGDTAAKYFERTECVAGVQDMRFQELMSDILHWLGITKIHRFVSMSN
HHHHHHCCHHHCCCCCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
MKYDALLKSGINVIERVKIPDELIPPDARVEIDAKRAAGYYSPEGIIDINELAKPKGRAL
CHHHHHHHHHHHHHHHCCCCHHHCCCCCEEEEEHHHCCCCCCCCCCEEHHHHCCCCCCCC
HE
CC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA