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The map label for this gene is yeaW [H]

Identifier: 148359759

GI number: 148359759

Start: 2621417

End: 2622502

Strand: Direct

Name: yeaW [H]

Synonym: LPC_1683

Alternate gene names: 148359759

Gene position: 2621417-2622502 (Clockwise)

Preceding gene: 148359754

Following gene: 148359760

Centisome position: 73.3

GC content: 38.67

Gene sequence:

>1086_bases
ATGAAGAATCTCTATATAGATCCTGATATTACAAAAGCCTCCACAATCTCTTCTGAATTTTATACATCAACAGAATGGTT
TGAAATTACAAAAGAAAAGATATTTAGTAAAACCTGGCAATTTTGTATCAGTACCGAAGAGCTGACAACGAATAGACAAT
TAATTCCTTTTACCCTGCTGCCTGGATTTCTTGAAGAACCCTTGCTGTTTACAAAAGATGAATCGGGTACAATTCGTTGT
TTGAGTAATGTATGTACCCATCGAGGTAAAATCCTGATCGAAGAACCTTGCGTAGCTCATAAAATCAAGTGCTCTTATCA
TGGCCGTCGGTTTAATTTTTGTGGCGAATTACTTCATATGCCTGAATTTGAACTCACAAAAGATTTCCCATCGAGCAATG
ACAACCTAAGTCAAATTTCAACGGATATTCTTGAACCTTTTCTCTTTGCTTCACTTTCCCCCATCGTCCCGTTCCATGAA
GTATTTGCAGAAATTAAAGAAAGATTGTTTTGGCTGCCTATGGAAAAAATGCGCCTGGATAAAGAAAGATGCAAAGATTA
TGTAGTTAAATCGCATTGGGCTTTATACTGTGAAAATTACCTGGAAGCGTTACATATCCCTTTTGTACATCCCTCGCTAA
GAAAAGTAATCGATTGCAACACCTACACCACAGAACTCTTCCGCTACTGTAATCTCCAATTGGCTTTGGCAAACCCTGAG
GAAGCCAGCTTTGATTTACCCAAAGGAGCACAAGATTATGGCAAACAGGTTGCTGCCTATTATTTTTGGATATTCCCCAA
TACGATGCTTAATTTTTATCCCTGGGGTTGTTCTGTGAATGTAGTCAAACCGCTTAGTCCTGAGTTAACTCAGGTTTCCT
TTTTATCCTTTGTTCTTGATGAATCAAAACTTGGGAAAGGCGCTGGTGGAGCACTTGACCAAGTTGAACAAGAAGATGAA
AGAGTGGTGGAGTCTGTGCAAAGAGGGATAAAATCTCGCTATTATGATATGGGACGTTTCTCTCCAACAAAAGAACAGGG
TACACACCATTTTCAAAGACTACTGTGTGAGTTTCTTAATGATTGA

Upstream 100 bases:

>100_bases
CTACCTTTTACCAAACCTTAACCATCGCTTCACCAAAAGAAATGGTTATAGTGTTTATTCTCTTTTTGCAGGTTTTTCTC
TTTACAGTAAGGAAATGTTC

Downstream 100 bases:

>100_bases
AATTAGATCTGTCACATGCTCAGACTTGGAACGAAAAAATATTTTTAATAAACGATTTAGATCAATTAAGTAACTGAGTT
AGAATTATTTTTAGATAACG

Product: choline monooxygenase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 361; Mature: 361

Protein sequence:

>361_residues
MKNLYIDPDITKASTISSEFYTSTEWFEITKEKIFSKTWQFCISTEELTTNRQLIPFTLLPGFLEEPLLFTKDESGTIRC
LSNVCTHRGKILIEEPCVAHKIKCSYHGRRFNFCGELLHMPEFELTKDFPSSNDNLSQISTDILEPFLFASLSPIVPFHE
VFAEIKERLFWLPMEKMRLDKERCKDYVVKSHWALYCENYLEALHIPFVHPSLRKVIDCNTYTTELFRYCNLQLALANPE
EASFDLPKGAQDYGKQVAAYYFWIFPNTMLNFYPWGCSVNVVKPLSPELTQVSFLSFVLDESKLGKGAGGALDQVEQEDE
RVVESVQRGIKSRYYDMGRFSPTKEQGTHHFQRLLCEFLND

Sequences:

>Translated_361_residues
MKNLYIDPDITKASTISSEFYTSTEWFEITKEKIFSKTWQFCISTEELTTNRQLIPFTLLPGFLEEPLLFTKDESGTIRC
LSNVCTHRGKILIEEPCVAHKIKCSYHGRRFNFCGELLHMPEFELTKDFPSSNDNLSQISTDILEPFLFASLSPIVPFHE
VFAEIKERLFWLPMEKMRLDKERCKDYVVKSHWALYCENYLEALHIPFVHPSLRKVIDCNTYTTELFRYCNLQLALANPE
EASFDLPKGAQDYGKQVAAYYFWIFPNTMLNFYPWGCSVNVVKPLSPELTQVSFLSFVLDESKLGKGAGGALDQVEQEDE
RVVESVQRGIKSRYYDMGRFSPTKEQGTHHFQRLLCEFLND
>Mature_361_residues
MKNLYIDPDITKASTISSEFYTSTEWFEITKEKIFSKTWQFCISTEELTTNRQLIPFTLLPGFLEEPLLFTKDESGTIRC
LSNVCTHRGKILIEEPCVAHKIKCSYHGRRFNFCGELLHMPEFELTKDFPSSNDNLSQISTDILEPFLFASLSPIVPFHE
VFAEIKERLFWLPMEKMRLDKERCKDYVVKSHWALYCENYLEALHIPFVHPSLRKVIDCNTYTTELFRYCNLQLALANPE
EASFDLPKGAQDYGKQVAAYYFWIFPNTMLNFYPWGCSVNVVKPLSPELTQVSFLSFVLDESKLGKGAGGALDQVEQEDE
RVVESVQRGIKSRYYDMGRFSPTKEQGTHHFQRLLCEFLND

Specific function: Unknown

COG id: COG4638

COG function: function code PR; Phenylpropionate dioxygenase and related ring-hydroxylating dioxygenases, large terminal subunit

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 Rieske domain [H]

Homologues:

Organism=Escherichia coli, GI1788103, Length=370, Percent_Identity=26.4864864864865, Blast_Score=119, Evalue=3e-28,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR017941
- InterPro:   IPR015881
- InterPro:   IPR001663 [H]

Pfam domain/function: PF00355 Rieske [H]

EC number: 1.14.1.- [C]

Molecular weight: Translated: 41947; Mature: 41947

Theoretical pI: Translated: 5.46; Mature: 5.46

Prosite motif: PS00570 RING_HYDROXYL_ALPHA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.3 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
5.0 %Cys+Met (Translated Protein)
3.3 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
5.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKNLYIDPDITKASTISSEFYTSTEWFEITKEKIFSKTWQFCISTEELTTNRQLIPFTLL
CCCEECCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCHHHHCCCCCEEEHHHC
PGFLEEPLLFTKDESGTIRCLSNVCTHRGKILIEEPCVAHKIKCSYHGRRFNFCGELLHM
CHHHHCCCEEECCCCCHHHHHHHHHHCCCCEEEECCCCHHEEEECCCCCHHHHHHHHHCC
PEFELTKDFPSSNDNLSQISTDILEPFLFASLSPIVPFHEVFAEIKERLFWLPMEKMRLD
CCHHHHCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCHHHHHCC
KERCKDYVVKSHWALYCENYLEALHIPFVHPSLRKVIDCNTYTTELFRYCNLQLALANPE
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHCCCHHHHHHHHHHCCEEEECCCC
EASFDLPKGAQDYGKQVAAYYFWIFPNTMLNFYPWGCSVNVVKPLSPELTQVSFLSFVLD
CCCCCCCCCHHHHHHHHHHHEEEEECCCHHHEECCCCCEEEECCCCCCHHHHHHHHHHHH
ESKLGKGAGGALDQVEQEDERVVESVQRGIKSRYYDMGRFSPTKEQGTHHFQRLLCEFLN
HHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHC
D
C
>Mature Secondary Structure
MKNLYIDPDITKASTISSEFYTSTEWFEITKEKIFSKTWQFCISTEELTTNRQLIPFTLL
CCCEECCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCHHHHCCCCCEEEHHHC
PGFLEEPLLFTKDESGTIRCLSNVCTHRGKILIEEPCVAHKIKCSYHGRRFNFCGELLHM
CHHHHCCCEEECCCCCHHHHHHHHHHCCCCEEEECCCCHHEEEECCCCCHHHHHHHHHCC
PEFELTKDFPSSNDNLSQISTDILEPFLFASLSPIVPFHEVFAEIKERLFWLPMEKMRLD
CCHHHHCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCHHHHHCC
KERCKDYVVKSHWALYCENYLEALHIPFVHPSLRKVIDCNTYTTELFRYCNLQLALANPE
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHCCCHHHHHHHHHHCCEEEECCCC
EASFDLPKGAQDYGKQVAAYYFWIFPNTMLNFYPWGCSVNVVKPLSPELTQVSFLSFVLD
CCCCCCCCCHHHHHHHHHHHEEEEECCCHHHEECCCCCEEEECCCCCCHHHHHHHHHHHH
ESKLGKGAGGALDQVEQEDERVVESVQRGIKSRYYDMGRFSPTKEQGTHHFQRLLCEFLN
HHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHC
D
C

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]