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The map label for this gene is (hspc4-1 [H]

Identifier: 148359731

GI number: 148359731

Start: 2591082

End: 2591633

Strand: Direct

Name: (hspc4-1 [H]

Synonym: LPC_1655

Alternate gene names: 148359731

Gene position: 2591082-2591633 (Clockwise)

Preceding gene: 148359730

Following gene: 148359732

Centisome position: 72.45

GC content: 37.5

Gene sequence:

>552_bases
ATGGACATTAAAAAACTTGCCCCTTGGAATTGGTTTAAAGAGGAAGAAACTCAAAATAAGAGTGTACCAATTAGTACCAC
TGGACAAAACTATGTTTCTCCTCTGAGCCAACTGCACCAAGAAATAGATAGGATATTTGATAATGTCTTGCGAAGCGTGG
GAATTTCTAATCTGGATATAGACAAAACACTCCCTCACTCAACCCAAAATCTGTTGCTTAAGCCCTGTGTCGATATTGCA
GCAACGGATAAAGAATATACCATCACAGTTGAGGTGCCTGGCGTAGAAGAAGATCATATTAAATTGGAATTAACCAATGA
CACCTTGATCATTAAAGGTGAAAAGAAACATGAGTCAGAAAAAAAAGACAAAAACATCTATAGAGTCGAACGTGCTTATG
GCTCATTTCAACGCGTATTATCACTTCCCGAAGATGCTAATCAAGAAGACATTAAGGCTCAGATTAAAAATGGGGTACTC
ACTATTACAATGCCGCGTAAGGAGGTATCAAAACCCAAAGGTAAATTGATAGACATTAAAAAAGCAAGTTGA

Upstream 100 bases:

>100_bases
AGGATTTCTCCTGGGAATGATTGATTTGATGTTAACCAGATAAATCTAATAACAACAATAAATTAATTGACTTAACCCAA
ATTTAATGGAGGTTACTACT

Downstream 100 bases:

>100_bases
TTTATTGCCAGAAATCTATGAGCGATTTGCCCCGTGAGCATCCTCTTTGCTTCAGTAGCAAAGAGAATTGCAAAGGGAAA
GTTAGAATTGGGTACCAGGC

Product: small HspC2 heat shock protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 183; Mature: 183

Protein sequence:

>183_residues
MDIKKLAPWNWFKEEETQNKSVPISTTGQNYVSPLSQLHQEIDRIFDNVLRSVGISNLDIDKTLPHSTQNLLLKPCVDIA
ATDKEYTITVEVPGVEEDHIKLELTNDTLIIKGEKKHESEKKDKNIYRVERAYGSFQRVLSLPEDANQEDIKAQIKNGVL
TITMPRKEVSKPKGKLIDIKKAS

Sequences:

>Translated_183_residues
MDIKKLAPWNWFKEEETQNKSVPISTTGQNYVSPLSQLHQEIDRIFDNVLRSVGISNLDIDKTLPHSTQNLLLKPCVDIA
ATDKEYTITVEVPGVEEDHIKLELTNDTLIIKGEKKHESEKKDKNIYRVERAYGSFQRVLSLPEDANQEDIKAQIKNGVL
TITMPRKEVSKPKGKLIDIKKAS
>Mature_183_residues
MDIKKLAPWNWFKEEETQNKSVPISTTGQNYVSPLSQLHQEIDRIFDNVLRSVGISNLDIDKTLPHSTQNLLLKPCVDIA
ATDKEYTITVEVPGVEEDHIKLELTNDTLIIKGEKKHESEKKDKNIYRVERAYGSFQRVLSLPEDANQEDIKAQIKNGVL
TITMPRKEVSKPKGKLIDIKKAS

Specific function: Unknown

COG id: COG0071

COG function: function code O; Molecular chaperone (small heat shock protein)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the small heat shock protein (HSP20) family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002068
- InterPro:   IPR008978 [H]

Pfam domain/function: PF00011 HSP20 [H]

EC number: NA

Molecular weight: Translated: 20837; Mature: 20837

Theoretical pI: Translated: 6.96; Mature: 6.96

Prosite motif: PS01031 HSP20

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
1.6 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDIKKLAPWNWFKEEETQNKSVPISTTGQNYVSPLSQLHQEIDRIFDNVLRSVGISNLDI
CCCCCCCCCCCCCCHHCCCCCCCEEECCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
DKTLPHSTQNLLLKPCVDIAATDKEYTITVEVPGVEEDHIKLELTNDTLIIKGEKKHESE
CCCCCCCCHHHHHHHHHHHEECCCEEEEEEEECCCCCCCEEEEECCCEEEEECCHHHCHH
KKDKNIYRVERAYGSFQRVLSLPEDANQEDIKAQIKNGVLTITMPRKEVSKPKGKLIDIK
HHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCEEEEEECHHHHCCCCCCEEEEE
KAS
ECC
>Mature Secondary Structure
MDIKKLAPWNWFKEEETQNKSVPISTTGQNYVSPLSQLHQEIDRIFDNVLRSVGISNLDI
CCCCCCCCCCCCCCHHCCCCCCCEEECCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
DKTLPHSTQNLLLKPCVDIAATDKEYTITVEVPGVEEDHIKLELTNDTLIIKGEKKHESE
CCCCCCCCHHHHHHHHHHHEECCCEEEEEEEECCCCCCCEEEEECCCEEEEECCHHHCHH
KKDKNIYRVERAYGSFQRVLSLPEDANQEDIKAQIKNGVLTITMPRKEVSKPKGKLIDIK
HHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCEEEEEECHHHHCCCCCCEEEEE
KAS
ECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA