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The map label for this gene is bepF [H]

Identifier: 148359714

GI number: 148359714

Start: 2551776

End: 2552882

Strand: Direct

Name: bepF [H]

Synonym: LPC_1636

Alternate gene names: 148359714

Gene position: 2551776-2552882 (Clockwise)

Preceding gene: 148359712

Following gene: 148359715

Centisome position: 71.35

GC content: 40.47

Gene sequence:

>1107_bases
ATGAAAAAAATACTGGCATTGGTCATGCGATTACTGGCTGTTATTCTTATTCCTGTCCTCATGTCTTGTAATTCAGAATC
CAATAAGCCAGTGGGGCAAACCTTGGCAGAGGTTGACGTCGCGCTTCCAGTAAAAAAGAAAATTGTAGAATGGGATGAAT
ACACCGGACGATTTCAAGCAGTAGAAGAAGTGGATGTTCGTGCCCGTGTCACTGGATATCTTGAGGCGATCAAATTCCAG
GATGGCCAAACGGTAAAAAAAGGAGACGTTTTATTCGTTATTGATCAACGCCCCTTCAAATATGCTCTGGCAAGAGCAGA
AGCTCAATACGCATTAGCCAAAGCGCAATATGAACGTGCCATAAAACTACAAAAAGAGAAATTTATTTCCGCTGAGGTGA
TAGACCAACGATTTCAAGACGTACAAGTTGCTGAAACCAGAGTGCAGGAAGCAAAATTGAATCTCGAATTTACCGAAATC
AAAGCCCCCATCAGTGGCAAAATAAGTCGCGATTTTGTGAGTGTGGGTAATTTAATCCGCATGAATGACACAGTCTTGAC
TAAAGTAGTTTCTGTTGATCCCATTTATTTTTATTTTGAAACCAGTCAAAATGATTTGCTCAAATACATACGTCTTGATC
GCGCTGGAAAAAGGCTCAGTTCGGAGAAAAAACCAACTCCAGTCTTAATTAAGTTACCTGATGAAAAGGATTACCTGCAT
CAGGGAGAAGTAGATTTTTTAGATAATGTGATTGACTCAGGCACAGGAACTATTCTTGCCAGAGCACTTGTACCTAATCC
TGATAACGTCATTTATCCTGGCCTGTTTGCACGTGTAAAATTAGTTGGAAGTGGGGAATATGAAGCAATTTTGCTTCCCG
ATAAAGCAATCAATACGGATCAAGCCCGCAAATTTGTGTATGTGGTTGATAATGAAAATAAAGTGAAACGAGTGTATGTT
GAGTTAGGGCCACTGCGCGAAAGCGGGTTTTACATTATCCGAAGTGGATTGAAAGGGGATGAAAAAGTTATCATTCATGG
AATCCAACGTATTCATGGCCCAAACCAGGAAGTTAAGCCTGTGGTAATTGAGGTGACTGAAAATTAA

Upstream 100 bases:

>100_bases
ATATTCACGGTATTACGCATAATACATCTTTATAAGCTAAACTAAGCTTATCTACTGGATCATAACTTACCAGTGACTTG
AATATCAGGGATAGATAACA

Downstream 100 bases:

>100_bases
ACCAGTTGTGTGTTGAAATCCTGTTCATTCGATAGAATTTAATACTGCATAAAGCATACAACGTTTTACAGTGCAGCCAA
CAAGAAAAGGATTTACTGGA

Product: HlyD family transporter secretion protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 368; Mature: 368

Protein sequence:

>368_residues
MKKILALVMRLLAVILIPVLMSCNSESNKPVGQTLAEVDVALPVKKKIVEWDEYTGRFQAVEEVDVRARVTGYLEAIKFQ
DGQTVKKGDVLFVIDQRPFKYALARAEAQYALAKAQYERAIKLQKEKFISAEVIDQRFQDVQVAETRVQEAKLNLEFTEI
KAPISGKISRDFVSVGNLIRMNDTVLTKVVSVDPIYFYFETSQNDLLKYIRLDRAGKRLSSEKKPTPVLIKLPDEKDYLH
QGEVDFLDNVIDSGTGTILARALVPNPDNVIYPGLFARVKLVGSGEYEAILLPDKAINTDQARKFVYVVDNENKVKRVYV
ELGPLRESGFYIIRSGLKGDEKVIIHGIQRIHGPNQEVKPVVIEVTEN

Sequences:

>Translated_368_residues
MKKILALVMRLLAVILIPVLMSCNSESNKPVGQTLAEVDVALPVKKKIVEWDEYTGRFQAVEEVDVRARVTGYLEAIKFQ
DGQTVKKGDVLFVIDQRPFKYALARAEAQYALAKAQYERAIKLQKEKFISAEVIDQRFQDVQVAETRVQEAKLNLEFTEI
KAPISGKISRDFVSVGNLIRMNDTVLTKVVSVDPIYFYFETSQNDLLKYIRLDRAGKRLSSEKKPTPVLIKLPDEKDYLH
QGEVDFLDNVIDSGTGTILARALVPNPDNVIYPGLFARVKLVGSGEYEAILLPDKAINTDQARKFVYVVDNENKVKRVYV
ELGPLRESGFYIIRSGLKGDEKVIIHGIQRIHGPNQEVKPVVIEVTEN
>Mature_368_residues
MKKILALVMRLLAVILIPVLMSCNSESNKPVGQTLAEVDVALPVKKKIVEWDEYTGRFQAVEEVDVRARVTGYLEAIKFQ
DGQTVKKGDVLFVIDQRPFKYALARAEAQYALAKAQYERAIKLQKEKFISAEVIDQRFQDVQVAETRVQEAKLNLEFTEI
KAPISGKISRDFVSVGNLIRMNDTVLTKVVSVDPIYFYFETSQNDLLKYIRLDRAGKRLSSEKKPTPVLIKLPDEKDYLH
QGEVDFLDNVIDSGTGTILARALVPNPDNVIYPGLFARVKLVGSGEYEAILLPDKAINTDQARKFVYVVDNENKVKRVYV
ELGPLRESGFYIIRSGLKGDEKVIIHGIQRIHGPNQEVKPVVIEVTEN

Specific function: May contribute to resistance to some drugs, such as deoxycholate, sodium dodecyl sulfate and nalidixic acid, in the absence of BepD and BepE [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Periplasm (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family [H]

Homologues:

Organism=Escherichia coli, GI87082036, Length=336, Percent_Identity=31.8452380952381, Blast_Score=152, Evalue=4e-38,
Organism=Escherichia coli, GI1789929, Length=363, Percent_Identity=28.099173553719, Blast_Score=132, Evalue=5e-32,
Organism=Escherichia coli, GI1786668, Length=382, Percent_Identity=28.7958115183246, Blast_Score=130, Evalue=1e-31,
Organism=Escherichia coli, GI1789665, Length=372, Percent_Identity=29.3010752688172, Blast_Score=128, Evalue=6e-31,
Organism=Escherichia coli, GI87081951, Length=173, Percent_Identity=31.7919075144509, Blast_Score=65, Evalue=8e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006143 [H]

Pfam domain/function: PF00529 HlyD [H]

EC number: NA

Molecular weight: Translated: 41552; Mature: 41552

Theoretical pI: Translated: 8.72; Mature: 8.72

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
1.4 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
1.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKILALVMRLLAVILIPVLMSCNSESNKPVGQTLAEVDVALPVKKKIVEWDEYTGRFQA
CHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCHHHHHHCHHHHCCHHHH
VEEVDVRARVTGYLEAIKFQDGQTVKKGDVLFVIDQRPFKYALARAEAQYALAKAQYERA
HHHHHHHHHHHHHHHHEEECCCCEEECCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHH
IKLQKEKFISAEVIDQRFQDVQVAETRVQEAKLNLEFTEIKAPISGKISRDFVSVGNLIR
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEECCCCCCCCHHHHHHHCCEEE
MNDTVLTKVVSVDPIYFYFETSQNDLLKYIRLDRAGKRLSSEKKPTPVLIKLPDEKDYLH
ECCHHHHHEEEECEEEEEEECCHHHHHHHHHHHHHHHHHCCCCCCCCEEEECCCCCCHHC
QGEVDFLDNVIDSGTGTILARALVPNPDNVIYPGLFARVKLVGSGEYEAILLPDKAINTD
CCCHHHHHHHHCCCCCEEEEEEECCCCCCEECCCCEEEEEEEECCCEEEEECCCCCCCCC
QARKFVYVVDNENKVKRVYVELGPLRESGFYIIRSGLKGDEKVIIHGIQRIHGPNQEVKP
CCCEEEEEEECCCCEEEEEEEECCCCCCCEEEEECCCCCCCHHHHHHHHHHCCCCCCCCE
VVIEVTEN
EEEEEECC
>Mature Secondary Structure
MKKILALVMRLLAVILIPVLMSCNSESNKPVGQTLAEVDVALPVKKKIVEWDEYTGRFQA
CHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCHHHHHHCHHHHCCHHHH
VEEVDVRARVTGYLEAIKFQDGQTVKKGDVLFVIDQRPFKYALARAEAQYALAKAQYERA
HHHHHHHHHHHHHHHHEEECCCCEEECCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHH
IKLQKEKFISAEVIDQRFQDVQVAETRVQEAKLNLEFTEIKAPISGKISRDFVSVGNLIR
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEECCCCCCCCHHHHHHHCCEEE
MNDTVLTKVVSVDPIYFYFETSQNDLLKYIRLDRAGKRLSSEKKPTPVLIKLPDEKDYLH
ECCHHHHHEEEECEEEEEEECCHHHHHHHHHHHHHHHHHCCCCCCCCEEEECCCCCCHHC
QGEVDFLDNVIDSGTGTILARALVPNPDNVIYPGLFARVKLVGSGEYEAILLPDKAINTD
CCCHHHHHHHHCCCCCEEEEEEECCCCCCEECCCCEEEEEEEECCCEEEEECCCCCCCCC
QARKFVYVVDNENKVKRVYVELGPLRESGFYIIRSGLKGDEKVIIHGIQRIHGPNQEVKP
CCCEEEEEEECCCCEEEEEEEECCCCCCCEEEEECCCCCCCHHHHHHHHHHCCCCCCCCE
VVIEVTEN
EEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 12271122 [H]