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The map label for this gene is uup-A [H]

Identifier: 148359577

GI number: 148359577

Start: 2359781

End: 2361634

Strand: Reverse

Name: uup-A [H]

Synonym: LPC_1489

Alternate gene names: 148359577

Gene position: 2361634-2359781 (Counterclockwise)

Preceding gene: 148359578

Following gene: 148359576

Centisome position: 66.03

GC content: 39.54

Gene sequence:

>1854_bases
ATGAGTATAGTTTCCCTTAACGGTGCCTCTTTAATCTTGGCTGGCAATTGTATTCTGGACCGTGCAGATTTACAGATTCA
GCCACAGGATAGAATTGCCCTTGTTGGACGCAATGGCGCTGGAAAATCAACATTGCTGAAAATACTACAAGGGGAGTTGG
TGCTTGATAGTGGACAAATTCAACGCTCATCCGGTTTGCGTATTTCTGGTTTAGTTCAGGAAGTCCCAGGTGCTGAGGGA
GAGTCAGTGTACCATTTTCTTGTTAAAAGCTTAGGTGAAACAGGGGAAGTATTGTCCCAGTTTCATGAGTTTACGAAACA
AGGAGATATGGACAAATTGGCCAAGTGTCAGCAGCGAATGGACAACTTGAATGCATGGCATTTATTACCTGAAATTGAAA
CGATGGCAAGCCGATTGGGAATAGATATTCATGAGCAGATGTCTAATCTCTCAGGCGGTATGAAACGACGCGTATTATTA
GGTGCGGCACTGCTTGCCAAGCCTGATTTATTGTTACTGGATGAACCTACCAACCACTTGGATGTCGAAGCAATTGAATG
GTTAGAGAATTATTTAAAATCCTTTTCTGGTGCTGTAATGGTAGTAACTCACGACAGGGAATTCTTAAGCCAGATAGCAA
CAAGCATCCTTGAAATCGATCGTGGAAAATTGTATCTACACCATTGTAATTATGAAACTTACCTTGACAGGCGTGAATCG
ATAAGGCTTAGCGAACAAAAACAAAATGATTTGTTTGACAAACGGCTTGCAGAAGAAGAAGCCTGGATACGTACAGGTAT
CAAGGCAAGACGCACACGTAATGAGGGCAGAGTCAGGGCCTTAAAGGCAATGAGAGAGCAGTACAAAGCACGTCGTAATC
AGTTAGGAACAGTGAAATCCTTAAATTTGGATGTAAGCCGTTCTGGTGCTCTTGTAGTAGAAGCAAACAAAGTGAGTTAT
GCAATTAACGACAAGTCCATTATAAAAGATTTTTCTTTATTAATGACAAGAGGAGACAAGCTTGGGATTATCGGCCCCAA
TGGTTGTGGCAAAACTACTTTAGTTCGATTACTGCTGGGAGAAATTAAACCTGATGCTGGAACTATAAAATTAGGGACAG
GGCTTCAGGTAGCCTATTTTGATCAGTTACGCCGACATTTGCTTGAAGATCAAACAGTCATGTTTAATGTGGGGGAAGGG
GCTGATTATGTAACAATTAATGGTAAGCAAAAACATGTTGCCAGTTATTTGAAAGAGTTTTTATTTTCCTCAGATCGATT
TAATCAACCAGTATCTTCCTTGTCTGGAGGGGAAAGAAACAGATTATTACTGGCAAAACTTTTTGCCAAACCGGTTAATT
TACTCGTAATGGATGAACCAACTAATGATTTGGATATAGAAACTCTGGAACTTCTTGAAGCTGTATTAGCTGATTATCCT
GGTACTCTAATACTAATCAGTCATGATAGAGCGTTTATTAATCAAGTAGTAACCAGTGTGTTGGTTTATGAAGGAAATGG
TAAGTTTAATGAATTTGTTGGTGGTTATGACGATTATAAAAAACATCAATTAACACGAAATGAGCAGCAAACGAAATCTC
CAGTTTCAAAACGGAGCAGTCCAGAGAAAGCTAAAAATTTATCTTTTAATGAACAACGTGAGTTATCGAAGTTGCCGCAA
CAGATTGAAGCTGTAGAGAAAAAAATTGAAGCACTGCATTCACAAATGGCCTCACCTGAATTTTATCAGCAAGATGCCAA
GATTATTTCAGAGGTAACTCAGCTGCTAGCCAAGGAAGAGGCATTGTTAAATCAATATTTTACTCGTTGGGAAGAGCTGG
AAGAGAAAAAATAA

Upstream 100 bases:

>100_bases
GATTCAGCAAGGCAAACAATTGATATTAAAAAGACAGTGAACTGACTGTATGTTTTCAATAAAATGAGATCAAACAGATT
TATTTAAATAGAGAGTTTTG

Downstream 100 bases:

>100_bases
AAAAGTATTTGGTTAATTGATAAGTTTAAGTGAAAAACAATAAAAAGATATCTTTAAATAAAATTAAAAATAGGATTTAA
AATGCTTTTAACCTTGGCTT

Product: ABC transporter ATP binding protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 617; Mature: 616

Protein sequence:

>617_residues
MSIVSLNGASLILAGNCILDRADLQIQPQDRIALVGRNGAGKSTLLKILQGELVLDSGQIQRSSGLRISGLVQEVPGAEG
ESVYHFLVKSLGETGEVLSQFHEFTKQGDMDKLAKCQQRMDNLNAWHLLPEIETMASRLGIDIHEQMSNLSGGMKRRVLL
GAALLAKPDLLLLDEPTNHLDVEAIEWLENYLKSFSGAVMVVTHDREFLSQIATSILEIDRGKLYLHHCNYETYLDRRES
IRLSEQKQNDLFDKRLAEEEAWIRTGIKARRTRNEGRVRALKAMREQYKARRNQLGTVKSLNLDVSRSGALVVEANKVSY
AINDKSIIKDFSLLMTRGDKLGIIGPNGCGKTTLVRLLLGEIKPDAGTIKLGTGLQVAYFDQLRRHLLEDQTVMFNVGEG
ADYVTINGKQKHVASYLKEFLFSSDRFNQPVSSLSGGERNRLLLAKLFAKPVNLLVMDEPTNDLDIETLELLEAVLADYP
GTLILISHDRAFINQVVTSVLVYEGNGKFNEFVGGYDDYKKHQLTRNEQQTKSPVSKRSSPEKAKNLSFNEQRELSKLPQ
QIEAVEKKIEALHSQMASPEFYQQDAKIISEVTQLLAKEEALLNQYFTRWEELEEKK

Sequences:

>Translated_617_residues
MSIVSLNGASLILAGNCILDRADLQIQPQDRIALVGRNGAGKSTLLKILQGELVLDSGQIQRSSGLRISGLVQEVPGAEG
ESVYHFLVKSLGETGEVLSQFHEFTKQGDMDKLAKCQQRMDNLNAWHLLPEIETMASRLGIDIHEQMSNLSGGMKRRVLL
GAALLAKPDLLLLDEPTNHLDVEAIEWLENYLKSFSGAVMVVTHDREFLSQIATSILEIDRGKLYLHHCNYETYLDRRES
IRLSEQKQNDLFDKRLAEEEAWIRTGIKARRTRNEGRVRALKAMREQYKARRNQLGTVKSLNLDVSRSGALVVEANKVSY
AINDKSIIKDFSLLMTRGDKLGIIGPNGCGKTTLVRLLLGEIKPDAGTIKLGTGLQVAYFDQLRRHLLEDQTVMFNVGEG
ADYVTINGKQKHVASYLKEFLFSSDRFNQPVSSLSGGERNRLLLAKLFAKPVNLLVMDEPTNDLDIETLELLEAVLADYP
GTLILISHDRAFINQVVTSVLVYEGNGKFNEFVGGYDDYKKHQLTRNEQQTKSPVSKRSSPEKAKNLSFNEQRELSKLPQ
QIEAVEKKIEALHSQMASPEFYQQDAKIISEVTQLLAKEEALLNQYFTRWEELEEKK
>Mature_616_residues
SIVSLNGASLILAGNCILDRADLQIQPQDRIALVGRNGAGKSTLLKILQGELVLDSGQIQRSSGLRISGLVQEVPGAEGE
SVYHFLVKSLGETGEVLSQFHEFTKQGDMDKLAKCQQRMDNLNAWHLLPEIETMASRLGIDIHEQMSNLSGGMKRRVLLG
AALLAKPDLLLLDEPTNHLDVEAIEWLENYLKSFSGAVMVVTHDREFLSQIATSILEIDRGKLYLHHCNYETYLDRRESI
RLSEQKQNDLFDKRLAEEEAWIRTGIKARRTRNEGRVRALKAMREQYKARRNQLGTVKSLNLDVSRSGALVVEANKVSYA
INDKSIIKDFSLLMTRGDKLGIIGPNGCGKTTLVRLLLGEIKPDAGTIKLGTGLQVAYFDQLRRHLLEDQTVMFNVGEGA
DYVTINGKQKHVASYLKEFLFSSDRFNQPVSSLSGGERNRLLLAKLFAKPVNLLVMDEPTNDLDIETLELLEAVLADYPG
TLILISHDRAFINQVVTSVLVYEGNGKFNEFVGGYDDYKKHQLTRNEQQTKSPVSKRSSPEKAKNLSFNEQRELSKLPQQ
IEAVEKKIEALHSQMASPEFYQQDAKIISEVTQLLAKEEALLNQYFTRWEELEEKK

Specific function: Unknown

COG id: COG0488

COG function: function code R; ATPase components of ABC transporters with duplicated ATPase domains

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 2 ABC transporter domains [H]

Homologues:

Organism=Homo sapiens, GI148612853, Length=529, Percent_Identity=29.4896030245747, Blast_Score=207, Evalue=3e-53,
Organism=Homo sapiens, GI10947135, Length=553, Percent_Identity=27.4864376130199, Blast_Score=167, Evalue=3e-41,
Organism=Homo sapiens, GI69354671, Length=553, Percent_Identity=27.4864376130199, Blast_Score=166, Evalue=4e-41,
Organism=Homo sapiens, GI10947137, Length=535, Percent_Identity=26.3551401869159, Blast_Score=165, Evalue=1e-40,
Organism=Homo sapiens, GI27881506, Length=535, Percent_Identity=26.3551401869159, Blast_Score=165, Evalue=1e-40,
Organism=Escherichia coli, GI1787182, Length=640, Percent_Identity=47.1875, Blast_Score=552, Evalue=1e-158,
Organism=Escherichia coli, GI2367384, Length=534, Percent_Identity=36.7041198501873, Blast_Score=316, Evalue=4e-87,
Organism=Escherichia coli, GI1789751, Length=620, Percent_Identity=28.8709677419355, Blast_Score=261, Evalue=1e-70,
Organism=Escherichia coli, GI1787041, Length=506, Percent_Identity=31.8181818181818, Blast_Score=248, Evalue=1e-66,
Organism=Escherichia coli, GI1788506, Length=532, Percent_Identity=24.4360902255639, Blast_Score=87, Evalue=3e-18,
Organism=Escherichia coli, GI1788165, Length=186, Percent_Identity=31.1827956989247, Blast_Score=84, Evalue=2e-17,
Organism=Escherichia coli, GI1787758, Length=186, Percent_Identity=27.4193548387097, Blast_Score=72, Evalue=7e-14,
Organism=Escherichia coli, GI1788225, Length=209, Percent_Identity=28.7081339712919, Blast_Score=72, Evalue=8e-14,
Organism=Escherichia coli, GI1787029, Length=240, Percent_Identity=27.0833333333333, Blast_Score=72, Evalue=1e-13,
Organism=Escherichia coli, GI87081791, Length=242, Percent_Identity=26.8595041322314, Blast_Score=72, Evalue=1e-13,
Organism=Escherichia coli, GI1787164, Length=199, Percent_Identity=27.1356783919598, Blast_Score=66, Evalue=8e-12,
Organism=Escherichia coli, GI1789963, Length=223, Percent_Identity=29.1479820627803, Blast_Score=65, Evalue=2e-11,
Organism=Escherichia coli, GI1787105, Length=192, Percent_Identity=31.7708333333333, Blast_Score=65, Evalue=2e-11,
Organism=Escherichia coli, GI87081782, Length=184, Percent_Identity=29.3478260869565, Blast_Score=64, Evalue=2e-11,
Organism=Escherichia coli, GI1786563, Length=176, Percent_Identity=29.5454545454545, Blast_Score=64, Evalue=3e-11,
Organism=Escherichia coli, GI145693107, Length=219, Percent_Identity=27.3972602739726, Blast_Score=64, Evalue=3e-11,
Organism=Escherichia coli, GI1786872, Length=213, Percent_Identity=25.8215962441315, Blast_Score=64, Evalue=4e-11,
Organism=Escherichia coli, GI1787370, Length=283, Percent_Identity=24.0282685512367, Blast_Score=62, Evalue=8e-11,
Organism=Caenorhabditis elegans, GI17559834, Length=545, Percent_Identity=26.2385321100917, Blast_Score=188, Evalue=6e-48,
Organism=Caenorhabditis elegans, GI17555318, Length=543, Percent_Identity=26.7034990791897, Blast_Score=179, Evalue=3e-45,
Organism=Caenorhabditis elegans, GI17553372, Length=541, Percent_Identity=28.8354898336414, Blast_Score=170, Evalue=2e-42,
Organism=Caenorhabditis elegans, GI71992290, Length=251, Percent_Identity=25.0996015936255, Blast_Score=68, Evalue=2e-11,
Organism=Saccharomyces cerevisiae, GI6321121, Length=550, Percent_Identity=26.9090909090909, Blast_Score=169, Evalue=1e-42,
Organism=Saccharomyces cerevisiae, GI6320874, Length=553, Percent_Identity=25.497287522604, Blast_Score=168, Evalue=3e-42,
Organism=Saccharomyces cerevisiae, GI6325030, Length=378, Percent_Identity=27.5132275132275, Blast_Score=114, Evalue=7e-26,
Organism=Saccharomyces cerevisiae, GI6323278, Length=376, Percent_Identity=24.468085106383, Blast_Score=107, Evalue=6e-24,
Organism=Saccharomyces cerevisiae, GI6324314, Length=378, Percent_Identity=25.1322751322751, Blast_Score=102, Evalue=2e-22,
Organism=Saccharomyces cerevisiae, GI6324985, Length=176, Percent_Identity=27.8409090909091, Blast_Score=66, Evalue=2e-11,
Organism=Drosophila melanogaster, GI24666836, Length=534, Percent_Identity=29.7752808988764, Blast_Score=215, Evalue=8e-56,
Organism=Drosophila melanogaster, GI24642252, Length=554, Percent_Identity=27.7978339350181, Blast_Score=201, Evalue=1e-51,
Organism=Drosophila melanogaster, GI18859989, Length=554, Percent_Identity=27.7978339350181, Blast_Score=201, Evalue=1e-51,
Organism=Drosophila melanogaster, GI24641342, Length=552, Percent_Identity=28.804347826087, Blast_Score=194, Evalue=1e-49,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003439
- InterPro:   IPR017871
- InterPro:   IPR003593 [H]

Pfam domain/function: PF00005 ABC_tran [H]

EC number: NA

Molecular weight: Translated: 69411; Mature: 69280

Theoretical pI: Translated: 6.72; Mature: 6.72

Prosite motif: PS00211 ABC_TRANSPORTER_1 ; PS50893 ABC_TRANSPORTER_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSIVSLNGASLILAGNCILDRADLQIQPQDRIALVGRNGAGKSTLLKILQGELVLDSGQI
CEEEEECCCEEEEECCEEEECCCCEECCCCCEEEEECCCCCHHHHHHHHHCCEEECCCCC
QRSSGLRISGLVQEVPGAEGESVYHFLVKSLGETGEVLSQFHEFTKQGDMDKLAKCQQRM
CCCCCCCHHHHHHHCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHCCCHHHHHHHHHHH
DNLNAWHLLPEIETMASRLGIDIHEQMSNLSGGMKRRVLLGAALLAKPDLLLLDEPTNHL
HCCCCEEECHHHHHHHHHHCCCHHHHHHHHCCCHHHHHHHHHHHHCCCCEEEEECCCCCC
DVEAIEWLENYLKSFSGAVMVVTHDREFLSQIATSILEIDRGKLYLHHCNYETYLDRRES
CHHHHHHHHHHHHHHCCEEEEEECCHHHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHH
IRLSEQKQNDLFDKRLAEEEAWIRTGIKARRTRNEGRVRALKAMREQYKARRNQLGTVKS
CCCHHHHHHHHHHHHHHHHHHHHHHCHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCEEE
LNLDVSRSGALVVEANKVSYAINDKSIIKDFSLLMTRGDKLGIIGPNGCGKTTLVRLLLG
ECEEECCCCEEEEEECCEEEEECCHHHHHHHHHHHHCCCEEEEECCCCCCHHHHHHHHHH
EIKPDAGTIKLGTGLQVAYFDQLRRHLLEDQTVMFNVGEGADYVTINGKQKHVASYLKEF
HCCCCCCEEEECCCCCHHHHHHHHHHHHCCCEEEEEECCCCCEEEECCCHHHHHHHHHHH
LFSSDRFNQPVSSLSGGERNRLLLAKLFAKPVNLLVMDEPTNDLDIETLELLEAVLADYP
HHCCCCCCCCHHHCCCCCCCHHHHHHHHHCCCEEEEEECCCCCCCHHHHHHHHHHHHCCC
GTLILISHDRAFINQVVTSVLVYEGNGKFNEFVGGYDDYKKHQLTRNEQQTKSPVSKRSS
CEEEEEECCHHHHHHHHHHHEEECCCCCHHHHCCCHHHHHHHHHCCCHHHHHCCHHHCCC
PEKAKNLSFNEQRELSKLPQQIEAVEKKIEALHSQMASPEFYQQDAKIISEVTQLLAKEE
CHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHH
ALLNQYFTRWEELEEKK
HHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
SIVSLNGASLILAGNCILDRADLQIQPQDRIALVGRNGAGKSTLLKILQGELVLDSGQI
EEEEECCCEEEEECCEEEECCCCEECCCCCEEEEECCCCCHHHHHHHHHCCEEECCCCC
QRSSGLRISGLVQEVPGAEGESVYHFLVKSLGETGEVLSQFHEFTKQGDMDKLAKCQQRM
CCCCCCCHHHHHHHCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHCCCHHHHHHHHHHH
DNLNAWHLLPEIETMASRLGIDIHEQMSNLSGGMKRRVLLGAALLAKPDLLLLDEPTNHL
HCCCCEEECHHHHHHHHHHCCCHHHHHHHHCCCHHHHHHHHHHHHCCCCEEEEECCCCCC
DVEAIEWLENYLKSFSGAVMVVTHDREFLSQIATSILEIDRGKLYLHHCNYETYLDRRES
CHHHHHHHHHHHHHHCCEEEEEECCHHHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHH
IRLSEQKQNDLFDKRLAEEEAWIRTGIKARRTRNEGRVRALKAMREQYKARRNQLGTVKS
CCCHHHHHHHHHHHHHHHHHHHHHHCHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCEEE
LNLDVSRSGALVVEANKVSYAINDKSIIKDFSLLMTRGDKLGIIGPNGCGKTTLVRLLLG
ECEEECCCCEEEEEECCEEEEECCHHHHHHHHHHHHCCCEEEEECCCCCCHHHHHHHHHH
EIKPDAGTIKLGTGLQVAYFDQLRRHLLEDQTVMFNVGEGADYVTINGKQKHVASYLKEF
HCCCCCCEEEECCCCCHHHHHHHHHHHHCCCEEEEEECCCCCEEEECCCHHHHHHHHHHH
LFSSDRFNQPVSSLSGGERNRLLLAKLFAKPVNLLVMDEPTNDLDIETLELLEAVLADYP
HHCCCCCCCCHHHCCCCCCCHHHHHHHHHCCCEEEEEECCCCCCCHHHHHHHHHHHHCCC
GTLILISHDRAFINQVVTSVLVYEGNGKFNEFVGGYDDYKKHQLTRNEQQTKSPVSKRSS
CEEEEEECCHHHHHHHHHHHEEECCCCCHHHHCCCHHHHHHHHHCCCHHHHHCCHHHCCC
PEKAKNLSFNEQRELSKLPQQIEAVEKKIEALHSQMASPEFYQQDAKIISEVTQLLAKEE
CHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHH
ALLNQYFTRWEELEEKK
HHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: Endonuclease; Excision [C]

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]