Definition | Legionella pneumophila str. Corby chromosome, complete genome. |
---|---|
Accession | NC_009494 |
Length | 3,576,470 |
Click here to switch to the map view.
The map label for this gene is 148359528
Identifier: 148359528
GI number: 148359528
Start: 2306332
End: 2307825
Strand: Reverse
Name: 148359528
Synonym: LPC_1439
Alternate gene names: NA
Gene position: 2307825-2306332 (Counterclockwise)
Preceding gene: 148359530
Following gene: 148359523
Centisome position: 64.53
GC content: 38.02
Gene sequence:
>1494_bases ATGAACGATTCTGAAAATGAAAGTGATTCTGAATATGATAGCGATTCTGAATCTGAATATGAGCTCCGTACGCTACCATC CAAAATACATTTTGTTTGGGTTGGGGGACCTATTCGAGCTCAATATTTACGCACTATTATGGATGTTGCTGCAGTAGCAC TAAAAAGTGGTTTTGAGGTTAATTTATGGGTTGATAATGAAATGAATTACATTAAAACATCAACTCAAGAAGGAATAGAC ATACCTAACTTAAGAATAAGGAATATTCATGAATTAGAAGAAGGGATGAGAAATGATCCTTTTTACGAAGGGGACAGGTA CAAAAAATTTTGGGAATATGTCAATAGAGAAAGAGTCGGTTTCAGAAATCTTGCTGCAGCTGCAGATTTTTTTCGTTTTG AAATTTTAAGGCAAGAGGGTGGGTATTACTTTGATACCGATACCGTTTTTTATTTGGATGAAAACTCGCAATTTGTAGCG GATGAGGTTGCTTTTGGTATAAAAGCCCACGTAGATTTGTATACAGGATCATTGAGGGATCCACATGGAAGAGGGCCTAC TATCTATCATGTCAATACTTTAGGGGACGTCAATAACGATATTATTGCTGCTATTCCTGATCATGAGGTCATGGAAGATG CAATCTTAAATGCTATGCAACGCCATGAAGAGTATGACTTATCGCCTTTGCCCCGGGAATCTCTTAAAAAAAGATTCGGT CCATATGGCAATCTGATGGATGCTAAACGCACACCTTATCAATTGGAGGGATCAATGGATTTTAGAAAACATCAAACTAT TGCAGCTGGTCCGGGTGCCTTACAGGATGCATTGCGTGATTACATGGAAGGTGTTGAAGTGGAAGATTACAACTTATTAA TGACCTTAAAGGTTGGTAATGAAAGCTCAAGAGTAGCAAATGATAAGGATAAAAAACCGATCATGGGAATCGAAGTGGTC AGTAAGTGTGATAAAACATGGCTCACTAAAATAAATAAAGCTAAAAAAAGAAAAGCCAGGCAAAAAGCCTTTGATACCGA TTCGCTAGCTATAGAGCCAGCACTTTCAAAGGACTCTGGGCAGACAGCAAGTAATAGAGAGGCTTACTCTGATGGAGAAA GTGAGTACGATGGTGAATTAGCAGAAGAAATCGAATTCCAAGGCAACTTACGCAAAGAACAATTTATTAATAAATTGAAA GATTACATTATCACAAAAAAAGAAGAAGCAAGGCAGGCTTTGGAAGTAAAAGAGAATGAAGAAGGCCATGATTCCGAGGA AAAGATTCTAAGTAAGCATTTCAAAACACGACATATAGAGTTAACAAAAGGGTTCTCTGTTGAACAGAAAATTGCTGCCG TAGAGAAGCTTATTAGTTTACTGCAGGAAAAGGATGGGGCGGAACTGCTTAATGCAATTGATTACGCTGCACTTACCAGT TCTCGCCTGGGTAAGTTAGTCCAAAGATACGATGATTTGATACTTAAAGTGTAG
Upstream 100 bases:
>100_bases GTCGTATTAAAATGGTTTTTAAATGAAACTCAGAGTTTCAGCTGAATTAGATAGGGGTGTACTATAATTAAACAATATTG AGTTATTATGCGAGAGTTTC
Downstream 100 bases:
>100_bases TAGTTCAAACTTGATCTGACAGTTAGCGGTTTTTCAAGAAGTGTCTGTCAGGTCAAATTTAGTTTATAAATTTTTCCATC CAGATTTGTTTATCCTCTAT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 497; Mature: 497
Protein sequence:
>497_residues MNDSENESDSEYDSDSESEYELRTLPSKIHFVWVGGPIRAQYLRTIMDVAAVALKSGFEVNLWVDNEMNYIKTSTQEGID IPNLRIRNIHELEEGMRNDPFYEGDRYKKFWEYVNRERVGFRNLAAAADFFRFEILRQEGGYYFDTDTVFYLDENSQFVA DEVAFGIKAHVDLYTGSLRDPHGRGPTIYHVNTLGDVNNDIIAAIPDHEVMEDAILNAMQRHEEYDLSPLPRESLKKRFG PYGNLMDAKRTPYQLEGSMDFRKHQTIAAGPGALQDALRDYMEGVEVEDYNLLMTLKVGNESSRVANDKDKKPIMGIEVV SKCDKTWLTKINKAKKRKARQKAFDTDSLAIEPALSKDSGQTASNREAYSDGESEYDGELAEEIEFQGNLRKEQFINKLK DYIITKKEEARQALEVKENEEGHDSEEKILSKHFKTRHIELTKGFSVEQKIAAVEKLISLLQEKDGAELLNAIDYAALTS SRLGKLVQRYDDLILKV
Sequences:
>Translated_497_residues MNDSENESDSEYDSDSESEYELRTLPSKIHFVWVGGPIRAQYLRTIMDVAAVALKSGFEVNLWVDNEMNYIKTSTQEGID IPNLRIRNIHELEEGMRNDPFYEGDRYKKFWEYVNRERVGFRNLAAAADFFRFEILRQEGGYYFDTDTVFYLDENSQFVA DEVAFGIKAHVDLYTGSLRDPHGRGPTIYHVNTLGDVNNDIIAAIPDHEVMEDAILNAMQRHEEYDLSPLPRESLKKRFG PYGNLMDAKRTPYQLEGSMDFRKHQTIAAGPGALQDALRDYMEGVEVEDYNLLMTLKVGNESSRVANDKDKKPIMGIEVV SKCDKTWLTKINKAKKRKARQKAFDTDSLAIEPALSKDSGQTASNREAYSDGESEYDGELAEEIEFQGNLRKEQFINKLK DYIITKKEEARQALEVKENEEGHDSEEKILSKHFKTRHIELTKGFSVEQKIAAVEKLISLLQEKDGAELLNAIDYAALTS SRLGKLVQRYDDLILKV >Mature_497_residues MNDSENESDSEYDSDSESEYELRTLPSKIHFVWVGGPIRAQYLRTIMDVAAVALKSGFEVNLWVDNEMNYIKTSTQEGID IPNLRIRNIHELEEGMRNDPFYEGDRYKKFWEYVNRERVGFRNLAAAADFFRFEILRQEGGYYFDTDTVFYLDENSQFVA DEVAFGIKAHVDLYTGSLRDPHGRGPTIYHVNTLGDVNNDIIAAIPDHEVMEDAILNAMQRHEEYDLSPLPRESLKKRFG PYGNLMDAKRTPYQLEGSMDFRKHQTIAAGPGALQDALRDYMEGVEVEDYNLLMTLKVGNESSRVANDKDKKPIMGIEVV SKCDKTWLTKINKAKKRKARQKAFDTDSLAIEPALSKDSGQTASNREAYSDGESEYDGELAEEIEFQGNLRKEQFINKLK DYIITKKEEARQALEVKENEEGHDSEEKILSKHFKTRHIELTKGFSVEQKIAAVEKLISLLQEKDGAELLNAIDYAALTS SRLGKLVQRYDDLILKV
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 56911; Mature: 56911
Theoretical pI: Translated: 4.76; Mature: 4.76
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNDSENESDSEYDSDSESEYELRTLPSKIHFVWVGGPIRAQYLRTIMDVAAVALKSGFEV CCCCCCCCCCCCCCCCCCCCHHHCCCCEEEEEEECCCHHHHHHHHHHHHHHHHHHCCCEE NLWVDNEMNYIKTSTQEGIDIPNLRIRNIHELEEGMRNDPFYEGDRYKKFWEYVNRERVG EEEECCCCCCEECCCCCCCCCCCCCCCCHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHCC FRNLAAAADFFRFEILRQEGGYYFDTDTVFYLDENSQFVADEVAFGIKAHVDLYTGSLRD HHHHHHHHHHHHHHHHHHCCCEEECCCEEEEECCCCCCHHHHHHHCCEEEEEEEECCCCC PHGRGPTIYHVNTLGDVNNDIIAAIPDHEVMEDAILNAMQRHEEYDLSPLPRESLKKRFG CCCCCCEEEEEECCCCCCCCEEEECCCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHCC PYGNLMDAKRTPYQLEGSMDFRKHQTIAAGPGALQDALRDYMEGVEVEDYNLLMTLKVGN CCCCCCCCCCCCEEECCCCCHHHCCCCCCCCHHHHHHHHHHHCCCCEECCEEEEEEEECC ESSRVANDKDKKPIMGIEVVSKCDKTWLTKINKAKKRKARQKAFDTDSLAIEPALSKDSG CCHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCCCCCCC QTASNREAYSDGESEYDGELAEEIEFQGNLRKEQFINKLKDYIITKKEEARQALEVKENE CCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHCCC EGHDSEEKILSKHFKTRHIELTKGFSVEQKIAAVEKLISLLQEKDGAELLNAIDYAALTS CCCCHHHHHHHHHHHHCEEEEECCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH SRLGKLVQRYDDLILKV HHHHHHHHHHHHHHCCC >Mature Secondary Structure MNDSENESDSEYDSDSESEYELRTLPSKIHFVWVGGPIRAQYLRTIMDVAAVALKSGFEV CCCCCCCCCCCCCCCCCCCCHHHCCCCEEEEEEECCCHHHHHHHHHHHHHHHHHHCCCEE NLWVDNEMNYIKTSTQEGIDIPNLRIRNIHELEEGMRNDPFYEGDRYKKFWEYVNRERVG EEEECCCCCCEECCCCCCCCCCCCCCCCHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHCC FRNLAAAADFFRFEILRQEGGYYFDTDTVFYLDENSQFVADEVAFGIKAHVDLYTGSLRD HHHHHHHHHHHHHHHHHHCCCEEECCCEEEEECCCCCCHHHHHHHCCEEEEEEEECCCCC PHGRGPTIYHVNTLGDVNNDIIAAIPDHEVMEDAILNAMQRHEEYDLSPLPRESLKKRFG CCCCCCEEEEEECCCCCCCCEEEECCCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHCC PYGNLMDAKRTPYQLEGSMDFRKHQTIAAGPGALQDALRDYMEGVEVEDYNLLMTLKVGN CCCCCCCCCCCCEEECCCCCHHHCCCCCCCCHHHHHHHHHHHCCCCEECCEEEEEEEECC ESSRVANDKDKKPIMGIEVVSKCDKTWLTKINKAKKRKARQKAFDTDSLAIEPALSKDSG CCHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCCCCCCC QTASNREAYSDGESEYDGELAEEIEFQGNLRKEQFINKLKDYIITKKEEARQALEVKENE CCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHCCC EGHDSEEKILSKHFKTRHIELTKGFSVEQKIAAVEKLISLLQEKDGAELLNAIDYAALTS CCCCHHHHHHHHHHHHCEEEEECCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH SRLGKLVQRYDDLILKV HHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA