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The map label for this gene is 148359484

Identifier: 148359484

GI number: 148359484

Start: 2251263

End: 2253008

Strand: Reverse

Name: 148359484

Synonym: LPC_1392

Alternate gene names: NA

Gene position: 2253008-2251263 (Counterclockwise)

Preceding gene: 148359485

Following gene: 148359481

Centisome position: 63.0

GC content: 45.65

Gene sequence:

>1746_bases
ATGCAGCAAAAACAAATTATTACGTTAAAAAATAAAATAGAGCCTGTTGTTTGTGAATACGCTGGTGGTTATTTTAAATT
AAATGAGCAGGGCGTGTCTTTCCTTGGAAAAGACAAAGACGGTAATCCCATGGCACCCCGCTGGATTTGTTCCCCTTTGT
ATGTGGTGGCTAAAACGCGAGATGCCAAAAGTGGGGAGTGGGGTCGGTTACTTGAATGGCAGGATGACGATGGGGTCATT
CATCAATGGGCAATGCCTTTAGCCTTGTTACAAGGAGATGCCTCTGAAGTTAGAAGAGAATTGGCTAGTCTTGGTTTAAC
CATTTCACCCCATAAAATTTCCCGGGATTTGCTGACCACTTATTTGCAGGTCTTTCCAGTAGAGGACAGAGCTCGTTGTG
TCGAGAAATTGGGTTGGCATGAAAACCTCTTTGTTACTCCCTCACAAATCATTGGACATTCCTGTGAGAAAATTGTTTTT
CAAAATAGCCATGCGATTGAATCTGCTATGTCAGTATCGGGTACTGTAGACGATTGGCAAGAATCAATAGGCCGCCTTGC
TTCTGGCAATTCCCGGTTGATTTTTGCCATATCCGCTGCTTTTGCTCCTGCTTTGGCAAAAATTGCTGGTGAAGATTCAG
GTGGGTTTCACTTCAGAGGCGCTTCTTCTAGTGGTAAAAGTACCGCTTTAAAAGTAGCGGCTTCGGTTTGGGGTAATCCG
CAGGCTTATTGCCGATTATGGCGTAGCACCACCAATGGGCTTGAAGGATTAGCTGCTTTGCATAACGATGGCCTGCTGAT
TTTGGATGAGTTAAGTCAGATGGAGCCTAAAGAAGCAGGGGAGGCGGCTTATTTACTGGCTAATGGTCAAGGCAAAACAC
GAGCCTCGCGTCATGGAACAGCCAAGCCATCTTCTCGATGGTCCTTATTCTTTCTCTCGGCTGGGGAGGAATCCTTAATG
TCTTTGATGGCGAGAGCAGGCCAAAAAACCAATGCAGGACAAGAAATACGGTTAGCGGATATTGAAGCCGATGCGGGATT
TAACATGGGACTATTTGAGAAAACTCACAATCAACTCAGCCCAGCGACCATGGCCTTATCCTTAAAGGAATATTCCAGCA
AGTATTATGGTGCTGTGGGTATGGCATGGCTGCAACAGGTGGTGACAAACCAACCAAGTATTGCAATTGACATTGCTGAT
GCAATGCAGGAATTTGTGAACAGTGCTGTCTTACCGGATTCAACAGGGCAAATTATCCGTGTAGCCCGGCGGTTTGCTTT
AGTTGCTGTCGCGGGTGAATTAGCCACCCAATACGGATTGACTGGATGGAATGAGGGAGAGTCCACCGATGCCGCGTACA
AATGTTACAGAGCATGGCTCGAACATTTTGGCATGGAGGGCAACAAGGAGGACAGGGCGATATTAGCTCAAGTCAGGGCC
TTTTTTGAATCTCATGGTGCCAGCCGCTTTGATAATATCAGAACGCCAAACAATGAGCGGATTCAAAATCGTGCCGGATT
TTTTTATACCGATGACGCGGGTTTTCGTGTGTATATGGTATTAACGGAAGTCTTTAAAAAAGAGCTGTGTCAGGGATTTG
AGTCTAGAACAGTAGTTCGTGTGTTACTGAATGAAGGCTGGTTAAAGCCGGCAACAGATGGAATGCCTACTCATAAGCCA
AGAATCAAAGGAGTAGGAACACCCAGGGTCTATGTGTTTACCAATAAAATCTGGGGAGGGGAATAA

Upstream 100 bases:

>100_bases
GGGCAAGTCCTTTCAGTAGCCAACCAATAAAACAGATAGAAATAGATTGTTCAAAGAGAGATAGGGGTTCTATCTTTCTG
AACTCTGCTGGAGAAAAGTG

Downstream 100 bases:

>100_bases
GACCCTGGAAATTTGTCCCATTATTTTTAAGTGATGGGACAAATTGGGACGGCTCGAACCCAGTGTTTATGCGCTGTCCC
GCTTGTCCCAAATGTCCCGC

Product: inner membrane protein

Products: NA

Alternate protein names: Prophage Primase; Superfamily II Helicase; DNA/RNA Helicase; DNA Helicase Inner Membrane Protein; Conserved Domain Protein; Inner Membrane; Zinc Finger CHC2-Family Protein; Primase C 2 Family; Inner Membrane Protein Phage Origin; DNA Primase TraC

Number of amino acids: Translated: 581; Mature: 581

Protein sequence:

>581_residues
MQQKQIITLKNKIEPVVCEYAGGYFKLNEQGVSFLGKDKDGNPMAPRWICSPLYVVAKTRDAKSGEWGRLLEWQDDDGVI
HQWAMPLALLQGDASEVRRELASLGLTISPHKISRDLLTTYLQVFPVEDRARCVEKLGWHENLFVTPSQIIGHSCEKIVF
QNSHAIESAMSVSGTVDDWQESIGRLASGNSRLIFAISAAFAPALAKIAGEDSGGFHFRGASSSGKSTALKVAASVWGNP
QAYCRLWRSTTNGLEGLAALHNDGLLILDELSQMEPKEAGEAAYLLANGQGKTRASRHGTAKPSSRWSLFFLSAGEESLM
SLMARAGQKTNAGQEIRLADIEADAGFNMGLFEKTHNQLSPATMALSLKEYSSKYYGAVGMAWLQQVVTNQPSIAIDIAD
AMQEFVNSAVLPDSTGQIIRVARRFALVAVAGELATQYGLTGWNEGESTDAAYKCYRAWLEHFGMEGNKEDRAILAQVRA
FFESHGASRFDNIRTPNNERIQNRAGFFYTDDAGFRVYMVLTEVFKKELCQGFESRTVVRVLLNEGWLKPATDGMPTHKP
RIKGVGTPRVYVFTNKIWGGE

Sequences:

>Translated_581_residues
MQQKQIITLKNKIEPVVCEYAGGYFKLNEQGVSFLGKDKDGNPMAPRWICSPLYVVAKTRDAKSGEWGRLLEWQDDDGVI
HQWAMPLALLQGDASEVRRELASLGLTISPHKISRDLLTTYLQVFPVEDRARCVEKLGWHENLFVTPSQIIGHSCEKIVF
QNSHAIESAMSVSGTVDDWQESIGRLASGNSRLIFAISAAFAPALAKIAGEDSGGFHFRGASSSGKSTALKVAASVWGNP
QAYCRLWRSTTNGLEGLAALHNDGLLILDELSQMEPKEAGEAAYLLANGQGKTRASRHGTAKPSSRWSLFFLSAGEESLM
SLMARAGQKTNAGQEIRLADIEADAGFNMGLFEKTHNQLSPATMALSLKEYSSKYYGAVGMAWLQQVVTNQPSIAIDIAD
AMQEFVNSAVLPDSTGQIIRVARRFALVAVAGELATQYGLTGWNEGESTDAAYKCYRAWLEHFGMEGNKEDRAILAQVRA
FFESHGASRFDNIRTPNNERIQNRAGFFYTDDAGFRVYMVLTEVFKKELCQGFESRTVVRVLLNEGWLKPATDGMPTHKP
RIKGVGTPRVYVFTNKIWGGE
>Mature_581_residues
MQQKQIITLKNKIEPVVCEYAGGYFKLNEQGVSFLGKDKDGNPMAPRWICSPLYVVAKTRDAKSGEWGRLLEWQDDDGVI
HQWAMPLALLQGDASEVRRELASLGLTISPHKISRDLLTTYLQVFPVEDRARCVEKLGWHENLFVTPSQIIGHSCEKIVF
QNSHAIESAMSVSGTVDDWQESIGRLASGNSRLIFAISAAFAPALAKIAGEDSGGFHFRGASSSGKSTALKVAASVWGNP
QAYCRLWRSTTNGLEGLAALHNDGLLILDELSQMEPKEAGEAAYLLANGQGKTRASRHGTAKPSSRWSLFFLSAGEESLM
SLMARAGQKTNAGQEIRLADIEADAGFNMGLFEKTHNQLSPATMALSLKEYSSKYYGAVGMAWLQQVVTNQPSIAIDIAD
AMQEFVNSAVLPDSTGQIIRVARRFALVAVAGELATQYGLTGWNEGESTDAAYKCYRAWLEHFGMEGNKEDRAILAQVRA
FFESHGASRFDNIRTPNNERIQNRAGFFYTDDAGFRVYMVLTEVFKKELCQGFESRTVVRVLLNEGWLKPATDGMPTHKP
RIKGVGTPRVYVFTNKIWGGE

Specific function: Unknown

COG id: COG5519

COG function: function code L; Superfamily II helicase and inactivated derivatives

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 64011; Mature: 64011

Theoretical pI: Translated: 7.13; Mature: 7.13

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQQKQIITLKNKIEPVVCEYAGGYFKLNEQGVSFLGKDKDGNPMAPRWICSPLYVVAKTR
CCCCEEEEHHHCCCEEEEECCCCEEEECCCCCCEECCCCCCCCCCCHHHCCCEEEEEECC
DAKSGEWGRLLEWQDDDGVIHQWAMPLALLQGDASEVRRELASLGLTISPHKISRDLLTT
CCCCCCCCCEEEEECCCCCHHHHHHHHHHHCCCHHHHHHHHHHCCCEECHHHHHHHHHHH
YLQVFPVEDRARCVEKLGWHENLFVTPSQIIGHSCEKIVFQNSHAIESAMSVSGTVDDWQ
HHHHCCCCHHHHHHHHCCCCCCEEECHHHHHCCHHHHHHCCCCHHHHHHHHCCCCHHHHH
ESIGRLASGNSRLIFAISAAFAPALAKIAGEDSGGFHFRGASSSGKSTALKVAASVWGNP
HHHHHHHCCCCEEEEEEHHHHHHHHHHHHCCCCCCEEEECCCCCCCHHHHHHHHHHCCCH
QAYCRLWRSTTNGLEGLAALHNDGLLILDELSQMEPKEAGEAAYLLANGQGKTRASRHGT
HHHHHHHHHHCCHHHHHHHHCCCCEEEEEHHHHCCCCCCCCEEEEEECCCCCCCCCCCCC
AKPSSRWSLFFLSAGEESLMSLMARAGQKTNAGQEIRLADIEADAGFNMGLFEKTHNQLS
CCCCCCEEEEEEECCHHHHHHHHHHCCCCCCCCCEEEEEEECCCCCCCCCHHHHHHCCCC
PATMALSLKEYSSKYYGAVGMAWLQQVVTNQPSIAIDIADAMQEFVNSAVLPDSTGQIIR
CHHHEEEHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEHHHHHHHHHHCCCCCCCCHHHHH
VARRFALVAVAGELATQYGLTGWNEGESTDAAYKCYRAWLEHFGMEGNKEDRAILAQVRA
HHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHH
FFESHGASRFDNIRTPNNERIQNRAGFFYTDDAGFRVYMVLTEVFKKELCQGFESRTVVR
HHHHCCCCHHCCCCCCCCHHHHHCCCEEEECCCCCEEHHHHHHHHHHHHHCCHHHHHHHH
VLLNEGWLKPATDGMPTHKPRIKGVGTPRVYVFTNKIWGGE
HHHHCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCC
>Mature Secondary Structure
MQQKQIITLKNKIEPVVCEYAGGYFKLNEQGVSFLGKDKDGNPMAPRWICSPLYVVAKTR
CCCCEEEEHHHCCCEEEEECCCCEEEECCCCCCEECCCCCCCCCCCHHHCCCEEEEEECC
DAKSGEWGRLLEWQDDDGVIHQWAMPLALLQGDASEVRRELASLGLTISPHKISRDLLTT
CCCCCCCCCEEEEECCCCCHHHHHHHHHHHCCCHHHHHHHHHHCCCEECHHHHHHHHHHH
YLQVFPVEDRARCVEKLGWHENLFVTPSQIIGHSCEKIVFQNSHAIESAMSVSGTVDDWQ
HHHHCCCCHHHHHHHHCCCCCCEEECHHHHHCCHHHHHHCCCCHHHHHHHHCCCCHHHHH
ESIGRLASGNSRLIFAISAAFAPALAKIAGEDSGGFHFRGASSSGKSTALKVAASVWGNP
HHHHHHHCCCCEEEEEEHHHHHHHHHHHHCCCCCCEEEECCCCCCCHHHHHHHHHHCCCH
QAYCRLWRSTTNGLEGLAALHNDGLLILDELSQMEPKEAGEAAYLLANGQGKTRASRHGT
HHHHHHHHHHCCHHHHHHHHCCCCEEEEEHHHHCCCCCCCCEEEEEECCCCCCCCCCCCC
AKPSSRWSLFFLSAGEESLMSLMARAGQKTNAGQEIRLADIEADAGFNMGLFEKTHNQLS
CCCCCCEEEEEEECCHHHHHHHHHHCCCCCCCCCEEEEEEECCCCCCCCCHHHHHHCCCC
PATMALSLKEYSSKYYGAVGMAWLQQVVTNQPSIAIDIADAMQEFVNSAVLPDSTGQIIR
CHHHEEEHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEHHHHHHHHHHCCCCCCCCHHHHH
VARRFALVAVAGELATQYGLTGWNEGESTDAAYKCYRAWLEHFGMEGNKEDRAILAQVRA
HHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHH
FFESHGASRFDNIRTPNNERIQNRAGFFYTDDAGFRVYMVLTEVFKKELCQGFESRTVVR
HHHHCCCCHHCCCCCCCCHHHHHCCCEEEECCCCCEEHHHHHHHHHHHHHCCHHHHHHHH
VLLNEGWLKPATDGMPTHKPRIKGVGTPRVYVFTNKIWGGE
HHHHCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA