Click here to switch to the map view.

The map label for this gene is yfcM [C]

Identifier: 148359453

GI number: 148359453

Start: 2216258

End: 2216791

Strand: Reverse

Name: yfcM [C]

Synonym: LPC_1360

Alternate gene names: 148359453

Gene position: 2216791-2216258 (Counterclockwise)

Preceding gene: 148359454

Following gene: 148359451

Centisome position: 61.98

GC content: 41.01

Gene sequence:

>534_bases
GTGCATCACGTAGAAGATCTAATTAGTATTTTTAATTATTGCTTTGAGAATGACTACAATACCCGTCTGGTTAGAGGGGG
AGATGAGCCTATTTATCTTCCTGCAGATGACCAGAGGCCTTATCATGCGCTATTTTTCGCACATGGATTTTTTAGCAGTG
CTTTGCATGAATGCGCTCATTGGCTTATTGCTGGAGAAGAAAGAAGAAAACTAGTCGATTTTGGCTATTGGTATGCTCCT
GATGGACGCAATGAGGAACAACAAACTCTGTTTCAGAGGGTGGAAGTGAAGCCACAGGCTTTAGAGTGGATTCTTTCTAT
GGCCGCGGGACATAAATTTAGGGTAAGTATTGATAATTTAAATGGGGCTGAAGTAGACACGGAGGCCTTTAAACAGTCAA
TCTATAAGCAGGTGTTTCATTATTGTACCCAGGGGTTACCACAGCGTGCACTACATTTTCGTAATGCTTTATGTGCTTTT
TACCGTCAACCTTCTCCCCTGAGAATTGATGATTTTTCAATCGATGAATTGTAA

Upstream 100 bases:

>100_bases
ATAGGTATGGAAAATGAAATAGAATTAAAATCTGCTTTGAAAAAAGAGTATAATCAGTATCAGATAGGTAAGCATCAAAG
GTTTTGCTAGGTAACGATTC

Downstream 100 bases:

>100_bases
TGCTTCAAGCGCGGTGAAGCACGACTCCAATTGTCCAATCGAGATTTTGTTCTGGCGGAATATAATGGATGGTTTGATTG
GGGTTAATGCCATAACCATC

Product: transporting ATPase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 177; Mature: 177

Protein sequence:

>177_residues
MHHVEDLISIFNYCFENDYNTRLVRGGDEPIYLPADDQRPYHALFFAHGFFSSALHECAHWLIAGEERRKLVDFGYWYAP
DGRNEEQQTLFQRVEVKPQALEWILSMAAGHKFRVSIDNLNGAEVDTEAFKQSIYKQVFHYCTQGLPQRALHFRNALCAF
YRQPSPLRIDDFSIDEL

Sequences:

>Translated_177_residues
MHHVEDLISIFNYCFENDYNTRLVRGGDEPIYLPADDQRPYHALFFAHGFFSSALHECAHWLIAGEERRKLVDFGYWYAP
DGRNEEQQTLFQRVEVKPQALEWILSMAAGHKFRVSIDNLNGAEVDTEAFKQSIYKQVFHYCTQGLPQRALHFRNALCAF
YRQPSPLRIDDFSIDEL
>Mature_177_residues
MHHVEDLISIFNYCFENDYNTRLVRGGDEPIYLPADDQRPYHALFFAHGFFSSALHECAHWLIAGEERRKLVDFGYWYAP
DGRNEEQQTLFQRVEVKPQALEWILSMAAGHKFRVSIDNLNGAEVDTEAFKQSIYKQVFHYCTQGLPQRALHFRNALCAF
YRQPSPLRIDDFSIDEL

Specific function: Unknown

COG id: COG3101

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: To E.coli yfcM [H]

Homologues:

Organism=Escherichia coli, GI1788666, Length=165, Percent_Identity=55.1515151515151, Blast_Score=197, Evalue=3e-52,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007411 [H]

Pfam domain/function: PF04315 DUF462 [H]

EC number: NA

Molecular weight: Translated: 20749; Mature: 20749

Theoretical pI: Translated: 5.77; Mature: 5.77

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.3 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
2.3 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHHVEDLISIFNYCFENDYNTRLVRGGDEPIYLPADDQRPYHALFFAHGFFSSALHECAH
CCHHHHHHHHHHHHHCCCCCCEEEECCCCEEEECCCCCCCHHHHHHHHHHHHHHHHHHHH
WLIAGEERRKLVDFGYWYAPDGRNEEQQTLFQRVEVKPQALEWILSMAAGHKFRVSIDNL
HHHCCHHHHHHHHCCCEECCCCCCHHHHHHHHHHCCCHHHHHHHHHHHCCCEEEEEECCC
NGAEVDTEAFKQSIYKQVFHYCTQGLPQRALHFRNALCAFYRQPSPLRIDDFSIDEL
CCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCEECCCCCCCC
>Mature Secondary Structure
MHHVEDLISIFNYCFENDYNTRLVRGGDEPIYLPADDQRPYHALFFAHGFFSSALHECAH
CCHHHHHHHHHHHHHCCCCCCEEEECCCCEEEECCCCCCCHHHHHHHHHHHHHHHHHHHH
WLIAGEERRKLVDFGYWYAPDGRNEEQQTLFQRVEVKPQALEWILSMAAGHKFRVSIDNL
HHHCCHHHHHHHHCCCEECCCCCCHHHHHHHHHHCCCHHHHHHHHHHHCCCEEEEEECCC
NGAEVDTEAFKQSIYKQVFHYCTQGLPQRALHFRNALCAFYRQPSPLRIDDFSIDEL
CCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCEECCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]