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The map label for this gene is 148359445

Identifier: 148359445

GI number: 148359445

Start: 2211247

End: 2211540

Strand: Reverse

Name: 148359445

Synonym: LPC_1352

Alternate gene names: NA

Gene position: 2211540-2211247 (Counterclockwise)

Preceding gene: 148359446

Following gene: 148359437

Centisome position: 61.84

GC content: 38.78

Gene sequence:

>294_bases
ATGCAAGTGAAACAACCAGCCATTTACATCATGGCGAATAAACGCAATGGAACGATCTACACGGGTGTCACAAGCGATTT
GATCAAACGTGTCTATGAACATAAATATGGGGATGTACCCGGGTTTACTCAAGAGCATGGATGTAAGTTTCTTGTTTACT
ATGAGCTCATTGAAGACATGATAAGTGCCATAGCTCGAGAAAAACAACTTAAAGGCGGGTCAAGAAAAAAGAAATTGGCT
TTAATTGAAAAGCTAAACCCTTATTGGGAAGATCTTTACGAAAAACTGTTGTGA

Upstream 100 bases:

>100_bases
CAGTTTATTCACCATTCTTTCTCCGATATACTTGGGTTTTTGTGCATTAGTCGCGTGATATGCGCTGCTGAATGAATTGG
TCCAATAACAAGGAAGAAGC

Downstream 100 bases:

>100_bases
AGATTAGCAATTTTAAGGTCACTGGATTGCTTCGTCGCTACGCTCCTCGCAACGACGGTCCCAAAAATCGTACCGTAAAG
AGGTGAATTTTATTCAAGAT

Product: endonuclease

Products: NA

Alternate protein names: Excinuclease ABC C Subunit Domain Protein; Endonuclease; Endo/Excinuclease Amino Terminal Domain-Containing Protein; Excinuclease ABC Subunit C Domain-Containing Protein; Excinuclease ABC C Subunit; Excinuclease ABC C Subunit Domain-Containing Protein; Excinuclease ABC C Subunit-Like Protein; Endo/Excinuclease Amino Terminal Domain Protein; GIY-YIG Catalytic Domain-Containing Protein; Endonuclease Containing A URI Domain; Endonuclease Protein; Crossover Junction Endodeoxyribonuclease RuvC; Excinuclease ABC; GIY-YIG Endonuclease Domain-Containing Protein; Endo/Excinuclease; Excinuclease ABCsubunit C Domain-Containing Protein; Excinuclease ABC C Subunit N-Terminal; GIY-YIG Catalytic Domain Protein

Number of amino acids: Translated: 97; Mature: 97

Protein sequence:

>97_residues
MQVKQPAIYIMANKRNGTIYTGVTSDLIKRVYEHKYGDVPGFTQEHGCKFLVYYELIEDMISAIAREKQLKGGSRKKKLA
LIEKLNPYWEDLYEKLL

Sequences:

>Translated_97_residues
MQVKQPAIYIMANKRNGTIYTGVTSDLIKRVYEHKYGDVPGFTQEHGCKFLVYYELIEDMISAIAREKQLKGGSRKKKLA
LIEKLNPYWEDLYEKLL
>Mature_97_residues
MQVKQPAIYIMANKRNGTIYTGVTSDLIKRVYEHKYGDVPGFTQEHGCKFLVYYELIEDMISAIAREKQLKGGSRKKKLA
LIEKLNPYWEDLYEKLL

Specific function: Unknown

COG id: COG2827

COG function: function code L; Predicted endonuclease containing a URI domain

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 11330; Mature: 11330

Theoretical pI: Translated: 9.50; Mature: 9.50

Prosite motif: PS50164 UVRC_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQVKQPAIYIMANKRNGTIYTGVTSDLIKRVYEHKYGDVPGFTQEHGCKFLVYYELIEDM
CCCCCCEEEEEEECCCCEEEECCHHHHHHHHHHHCCCCCCCCCCCCCCEEEHHHHHHHHH
ISAIAREKQLKGGSRKKKLALIEKLNPYWEDLYEKLL
HHHHHHHHHHCCCCCHHHHHHHHHCCHHHHHHHHHHC
>Mature Secondary Structure
MQVKQPAIYIMANKRNGTIYTGVTSDLIKRVYEHKYGDVPGFTQEHGCKFLVYYELIEDM
CCCCCCEEEEEEECCCCEEEECCHHHHHHHHHHHCCCCCCCCCCCCCCEEEHHHHHHHHH
ISAIAREKQLKGGSRKKKLALIEKLNPYWEDLYEKLL
HHHHHHHHHHCCCCCHHHHHHHHHCCHHHHHHHHHHC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA