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The map label for this gene is recA

Identifier: 148359347

GI number: 148359347

Start: 2091081

End: 2092127

Strand: Reverse

Name: recA

Synonym: LPC_1245

Alternate gene names: 148359347

Gene position: 2092127-2091081 (Counterclockwise)

Preceding gene: 148359348

Following gene: 148359346

Centisome position: 58.5

GC content: 41.07

Gene sequence:

>1047_bases
ATGGAAGAAAATAAACAAAAAGCACTATCAGCGGCGCTTTCGCAAATTGAACGCCAATTTGGCAAAGGGTCTGTAATGCG
TATGGGAGATAGCACGGTATCACGGGATATTGAAGCAATCTCTACAGGTTCATTAGGTCTTGATATTGCCTTAGGGATAG
GCGGTTTGCCAAAAGGCCGTATTGTTGAAATTTATGGCCCTGAGTCTTCTGGTAAAACCACGCTCACTCTTCAAGTGATC
GCTGAATGTCAAAAAATGGGTGGTACAGCAGCATTTATCGATGCGGAACATGCTCTGGATCCAAGCTATGCTCAGAAACT
TGGTGTGAAGGTGGATGAGCTGTTGGTTTCTCAGCCGGATACAGGCGAGCAAGCTCTGGAAATTACTGATATGCTGGTGC
GTTCTGCAGCAGTTGATGTCGTAATAATTGACTCGGTTGCTGCCTTGACTCCCAAAGCAGAAATTGAGGGAGAAATGGGC
GATTCCCATGTTGGTTTACAGGCAAGATTGATGTCGCAAGCCCTGCGTAAATTGACCGCTAACATTAAACGTTCGAACAC
ACTGGTTATTTTTATTAATCAAATACGTATGAAAATTGGTGTGATGTTTGGTAGCCCTGAAACTACTACAGGGGGCAATG
CTTTGAAGTTTTATGCTTCAGTTCGTTTGGATATTCGCCGTATTGGTTCAATTAAAAAGGGTGAAGAAATATTAGGCAGT
GAAACCCGAGTTAAAGTAGTTAAAAATAAGGTAGCGCCACCGTTTAAAATGACTGAGTTTGATATTTTATATAACGAAGG
TATATCTCGTGAGAGTGAAATTATTAATCTGGGTGTTCAATTGAATTTAATTGAGAAATCAGGTGCCTGGTATAGCTACA
AACAGGAAAAAATCGGGCAGGGCAAAGAAAATGTCAGATTATATTTGAAAGAAAATCCCCAAGTCGCTGCAGAGCTTGAA
CAACAAATCCGTACTGAGCTCTTGGAAAAAAAGTTATCTGTGTTGGCTAGTTCATCAGAAGATCTTTTTGAGACTATAGA
TGACTAA

Upstream 100 bases:

>100_bases
TGCTACTTTTATTTAGTAATACACTAAGATTACTGTTTGCTGCTCGCTCACATCTGTGTGATAATTTTGTTCTTGCACAC
ATTATAATCTGGAATAAATT

Downstream 100 bases:

>100_bases
AGCATTCGATAGCGCCTTGCGTCTGTTAACCAGGCGCGAGTATAGCGCTATGGAGTTATGTGATAAACTGAAGCAGAAAG
GATTTAGCACCAATGATGTT

Product: recombinase A

Products: NA

Alternate protein names: Recombinase A

Number of amino acids: Translated: 348; Mature: 348

Protein sequence:

>348_residues
MEENKQKALSAALSQIERQFGKGSVMRMGDSTVSRDIEAISTGSLGLDIALGIGGLPKGRIVEIYGPESSGKTTLTLQVI
AECQKMGGTAAFIDAEHALDPSYAQKLGVKVDELLVSQPDTGEQALEITDMLVRSAAVDVVIIDSVAALTPKAEIEGEMG
DSHVGLQARLMSQALRKLTANIKRSNTLVIFINQIRMKIGVMFGSPETTTGGNALKFYASVRLDIRRIGSIKKGEEILGS
ETRVKVVKNKVAPPFKMTEFDILYNEGISRESEIINLGVQLNLIEKSGAWYSYKQEKIGQGKENVRLYLKENPQVAAELE
QQIRTELLEKKLSVLASSSEDLFETIDD

Sequences:

>Translated_348_residues
MEENKQKALSAALSQIERQFGKGSVMRMGDSTVSRDIEAISTGSLGLDIALGIGGLPKGRIVEIYGPESSGKTTLTLQVI
AECQKMGGTAAFIDAEHALDPSYAQKLGVKVDELLVSQPDTGEQALEITDMLVRSAAVDVVIIDSVAALTPKAEIEGEMG
DSHVGLQARLMSQALRKLTANIKRSNTLVIFINQIRMKIGVMFGSPETTTGGNALKFYASVRLDIRRIGSIKKGEEILGS
ETRVKVVKNKVAPPFKMTEFDILYNEGISRESEIINLGVQLNLIEKSGAWYSYKQEKIGQGKENVRLYLKENPQVAAELE
QQIRTELLEKKLSVLASSSEDLFETIDD
>Mature_348_residues
MEENKQKALSAALSQIERQFGKGSVMRMGDSTVSRDIEAISTGSLGLDIALGIGGLPKGRIVEIYGPESSGKTTLTLQVI
AECQKMGGTAAFIDAEHALDPSYAQKLGVKVDELLVSQPDTGEQALEITDMLVRSAAVDVVIIDSVAALTPKAEIEGEMG
DSHVGLQARLMSQALRKLTANIKRSNTLVIFINQIRMKIGVMFGSPETTTGGNALKFYASVRLDIRRIGSIKKGEEILGS
ETRVKVVKNKVAPPFKMTEFDILYNEGISRESEIINLGVQLNLIEKSGAWYSYKQEKIGQGKENVRLYLKENPQVAAELE
QQIRTELLEKKLSVLASSSEDLFETIDD

Specific function: Can catalyze the hydrolysis of ATP in the presence of single-stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with lexA causing its activation

COG id: COG0468

COG function: function code L; RecA/RadA recombinase

Gene ontology:

Cell location: Cytoplasm

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the recA family

Homologues:

Organism=Escherichia coli, GI1789051, Length=351, Percent_Identity=70.9401709401709, Blast_Score=503, Evalue=1e-144,

Paralogues:

None

Copy number: 1548 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. 800-1200 (L-broth) 40,000-60,000 (L-broth + Nalidixate) 4,000 Molecules/Cell In: Glucose minimal media [C]

Swissprot (AC and ID): RECA_LEGPA (Q5X4B5)

Other databases:

- EMBL:   CR628336
- RefSeq:   YP_124083.1
- ProteinModelPortal:   Q5X4B5
- SMR:   Q5X4B5
- STRING:   Q5X4B5
- GeneID:   3116486
- GenomeReviews:   CR628336_GR
- KEGG:   lpp:lpp1765
- LegioList:   lpp1765
- eggNOG:   COG0468
- HOGENOM:   HBG339889
- OMA:   GRDNTIT
- ProtClustDB:   PRK09354
- BioCyc:   LPNE297246:LPP1765-MONOMER
- GO:   GO:0005737
- HAMAP:   MF_00268
- InterPro:   IPR003593
- InterPro:   IPR013765
- InterPro:   IPR020584
- InterPro:   IPR020588
- InterPro:   IPR020587
- PANTHER:   PTHR22942:SF1
- PRINTS:   PR00142
- SMART:   SM00382
- TIGRFAMs:   TIGR02012

Pfam domain/function: PF00154 RecA

EC number: NA

Molecular weight: Translated: 37949; Mature: 37949

Theoretical pI: Translated: 5.08; Mature: 5.08

Prosite motif: PS00321 RECA_1; PS50162 RECA_2; PS50163 RECA_3

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEENKQKALSAALSQIERQFGKGSVMRMGDSTVSRDIEAISTGSLGLDIALGIGGLPKGR
CCCHHHHHHHHHHHHHHHHHCCCCEEEECCHHHHHHHHHHCCCCCCEEEEECCCCCCCCC
IVEIYGPESSGKTTLTLQVIAECQKMGGTAAFIDAEHALDPSYAQKLGVKVDELLVSQPD
EEEEECCCCCCCEEEEHHHHHHHHHCCCEEEEEECHHCCCHHHHHHHCCCHHHHHCCCCC
TGEQALEITDMLVRSAAVDVVIIDSVAALTPKAEIEGEMGDSHVGLQARLMSQALRKLTA
CCHHHHHHHHHHHHHHHCCEEEECCHHHCCCCHHCCCCCCCCCCCHHHHHHHHHHHHHHH
NIKRSNTLVIFINQIRMKIGVMFGSPETTTGGNALKFYASVRLDIRRIGSIKKGEEILGS
HCCCCCEEEEEEEEEEEEEEEEECCCCCCCCCCEEEEEEEHHHHHHHHCCCCCCHHHHCC
ETRVKVVKNKVAPPFKMTEFDILYNEGISRESEIINLGVQLNLIEKSGAWYSYKQEKIGQ
CHHHHHHHHCCCCCCCCEEEEEEECCCCCCCCCEEEECEEEEEEECCCCEEEECHHHHCC
GKENVRLYLKENPQVAAELEQQIRTELLEKKLSVLASSSEDLFETIDD
CCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCC
>Mature Secondary Structure
MEENKQKALSAALSQIERQFGKGSVMRMGDSTVSRDIEAISTGSLGLDIALGIGGLPKGR
CCCHHHHHHHHHHHHHHHHHCCCCEEEECCHHHHHHHHHHCCCCCCEEEEECCCCCCCCC
IVEIYGPESSGKTTLTLQVIAECQKMGGTAAFIDAEHALDPSYAQKLGVKVDELLVSQPD
EEEEECCCCCCCEEEEHHHHHHHHHCCCEEEEEECHHCCCHHHHHHHCCCHHHHHCCCCC
TGEQALEITDMLVRSAAVDVVIIDSVAALTPKAEIEGEMGDSHVGLQARLMSQALRKLTA
CCHHHHHHHHHHHHHHHCCEEEECCHHHCCCCHHCCCCCCCCCCCHHHHHHHHHHHHHHH
NIKRSNTLVIFINQIRMKIGVMFGSPETTTGGNALKFYASVRLDIRRIGSIKKGEEILGS
HCCCCCEEEEEEEEEEEEEEEEECCCCCCCCCCEEEEEEEHHHHHHHHCCCCCCHHHHCC
ETRVKVVKNKVAPPFKMTEFDILYNEGISRESEIINLGVQLNLIEKSGAWYSYKQEKIGQ
CHHHHHHHHCCCCCCCCEEEEEEECCCCCCCCCEEEECEEEEEEECCCCEEEECHHHHCC
GKENVRLYLKENPQVAAELEQQIRTELLEKKLSVLASSSEDLFETIDD
CCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA