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The map label for this gene is fliM [H]

Identifier: 148359336

GI number: 148359336

Start: 2078960

End: 2080021

Strand: Reverse

Name: fliM [H]

Synonym: LPC_1233

Alternate gene names: 148359336

Gene position: 2080021-2078960 (Counterclockwise)

Preceding gene: 148359337

Following gene: 148359335

Centisome position: 58.16

GC content: 38.04

Gene sequence:

>1062_bases
ATGACTGAGAAAGATGTGTTATCACAAGAAGAGATCGATGCATTACTGGATTCAGTGGATGAGTCAATTGATGATGAAAC
GAATGATGAAGAATTGAATTCAAGGGAGCAGCCAGCACGTAAAAAACCAGAAGATGCGACCAGCCAGGAATTAAACTCCA
CTTTTGATTCTGATAAAAAAATAGCGGAAGAAGGAGTCAAAACACTTAATTTTACCGGACAAGAGCGTATTGTTAAAGGG
CAGCTTCCGGTATTAGATAAAATTTATGACAGGGCAGTTCGTCTGTTTGCAGCAGATATTTATCATTTAACGGCTAGAGA
TTTTGAAATTAAACAAGATCCGCTACTTATTACAAAGCATAAGGAGTTTATGAAGAGTTTACCTAATCCTAGCCTGATAG
GTATCTACAAATTCAAGCCTCTTCGTGGTAAAGGAATTATTTTGTTTGACAGTACCTTTGTGTATGACTTGGTCGATTAT
TATTTTGGCGGAAATAGCCAATTTGGTGCTCAAAAGGATAAAACAGATTTTACTGCAACTGAACTTCGTGTTATGGAAGT
CGTCACTAAAAAACTGGTAGCTAATTTAATCCATGCCTGGGAACCAATAATTCAACTGGATGTAACAAAATTCAATGACG
AAACAAATCCCCAATTAGTTAATATTGCCGAGCCAGAAGAAATGTTGCTTGTGGCGCGATTCGTCTTGAATTTTGGTAAG
GAAACAGGGGCTTTTTACTTTATTTTACCATACTCCATGCTTGAACCTATCAAGCAGCAATTGGAGCTAGGGGCATCAAG
ACCTGATGATGAAATTGATCCTAACTGGATTAATTCTCTGAAAGAAGAGCTCATGGATGTTGAATTGTCAGTTAGTGCTT
CAATGGCGGAAACAGTCAGTACTCTGGGGCAGGTAATGTCATGGAAAGTGGGAGATTTTGTCCCTTTGGAGATAAATGAA
GAGGTAACCTTGGACATAGAAGGGACACCAAGTTTTACTGCAACCTTAGGCAGTACCAATGAAAAGCGAGCTTTGAAAAT
TATTAAAATAATACGTTATTAG

Upstream 100 bases:

>100_bases
CTATAGTTGTTACTGATGGATTGAGCTAATTTTAAACTAATCAACCCTTCAATTTTAAAATAACTTTGAAAAATCTGGTT
GAGATGCGAATGGATTGCTT

Downstream 100 bases:

>100_bases
GGGATAAGGATGACTCAAGTGAACGAAACCAGCGCAGAACAATTAAATCAAGGGAATCCACTGAATCCAGATCCTGGCAA
TGAGAAATTGGAATTAATTT

Product: Flagellar motor switch protein FliM

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 353; Mature: 352

Protein sequence:

>353_residues
MTEKDVLSQEEIDALLDSVDESIDDETNDEELNSREQPARKKPEDATSQELNSTFDSDKKIAEEGVKTLNFTGQERIVKG
QLPVLDKIYDRAVRLFAADIYHLTARDFEIKQDPLLITKHKEFMKSLPNPSLIGIYKFKPLRGKGIILFDSTFVYDLVDY
YFGGNSQFGAQKDKTDFTATELRVMEVVTKKLVANLIHAWEPIIQLDVTKFNDETNPQLVNIAEPEEMLLVARFVLNFGK
ETGAFYFILPYSMLEPIKQQLELGASRPDDEIDPNWINSLKEELMDVELSVSASMAETVSTLGQVMSWKVGDFVPLEINE
EVTLDIEGTPSFTATLGSTNEKRALKIIKIIRY

Sequences:

>Translated_353_residues
MTEKDVLSQEEIDALLDSVDESIDDETNDEELNSREQPARKKPEDATSQELNSTFDSDKKIAEEGVKTLNFTGQERIVKG
QLPVLDKIYDRAVRLFAADIYHLTARDFEIKQDPLLITKHKEFMKSLPNPSLIGIYKFKPLRGKGIILFDSTFVYDLVDY
YFGGNSQFGAQKDKTDFTATELRVMEVVTKKLVANLIHAWEPIIQLDVTKFNDETNPQLVNIAEPEEMLLVARFVLNFGK
ETGAFYFILPYSMLEPIKQQLELGASRPDDEIDPNWINSLKEELMDVELSVSASMAETVSTLGQVMSWKVGDFVPLEINE
EVTLDIEGTPSFTATLGSTNEKRALKIIKIIRY
>Mature_352_residues
TEKDVLSQEEIDALLDSVDESIDDETNDEELNSREQPARKKPEDATSQELNSTFDSDKKIAEEGVKTLNFTGQERIVKGQ
LPVLDKIYDRAVRLFAADIYHLTARDFEIKQDPLLITKHKEFMKSLPNPSLIGIYKFKPLRGKGIILFDSTFVYDLVDYY
FGGNSQFGAQKDKTDFTATELRVMEVVTKKLVANLIHAWEPIIQLDVTKFNDETNPQLVNIAEPEEMLLVARFVLNFGKE
TGAFYFILPYSMLEPIKQQLELGASRPDDEIDPNWINSLKEELMDVELSVSASMAETVSTLGQVMSWKVGDFVPLEINEE
VTLDIEGTPSFTATLGSTNEKRALKIIKIIRY

Specific function: FliM is one of three proteins (FliG, FliN, FliM) that form the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the mot

COG id: COG1868

COG function: function code N; Flagellar motor switch protein

Gene ontology:

Cell location: Cell inner membrane; Peripheral membrane protein (Potential). Bacterial flagellum basal body [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the FliM family [H]

Homologues:

Organism=Escherichia coli, GI1788255, Length=350, Percent_Identity=28.8571428571429, Blast_Score=152, Evalue=3e-38,

Paralogues:

None

Copy number: 10-20 (rich media) [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001689
- InterPro:   IPR001543 [H]

Pfam domain/function: PF02154 FliM; PF01052 SpoA [H]

EC number: NA

Molecular weight: Translated: 40061; Mature: 39930

Theoretical pI: Translated: 4.32; Mature: 4.32

Prosite motif: PS00284 SERPIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTEKDVLSQEEIDALLDSVDESIDDETNDEELNSREQPARKKPEDATSQELNSTFDSDKK
CCCHHHCCHHHHHHHHHHHHHHCCCCCCCHHHCCCCCCCCCCCCCHHHHHHHHHHCCHHH
IAEEGVKTLNFTGQERIVKGQLPVLDKIYDRAVRLFAADIYHLTARDFEIKQDPLLITKH
HHHHHHHEECCCCCHHEEECCCCHHHHHHHHHHHHHHHHHHHHHCCCCEECCCCEEEECC
KEFMKSLPNPSLIGIYKFKPLRGKGIILFDSTFVYDLVDYYFGGNSQFGAQKDKTDFTAT
HHHHHHCCCCCEEEEEEECCCCCCEEEEECCHHHHHHHHHHCCCCCCCCCCCCCCCCHHH
ELRVMEVVTKKLVANLIHAWEPIIQLDVTKFNDETNPQLVNIAEPEEMLLVARFVLNFGK
HHHHHHHHHHHHHHHHHHHHCHHHEEEEEECCCCCCCCEEEECCHHHHHHHHHHHHHCCC
ETGAFYFILPYSMLEPIKQQLELGASRPDDEIDPNWINSLKEELMDVELSVSASMAETVS
CCCCEEEEECHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHH
TLGQVMSWKVGDFVPLEINEEVTLDIEGTPSFTATLGSTNEKRALKIIKIIRY
HHHHHHHCCCCCEEEEEECCEEEEEECCCCCEEEECCCCCHHHHHHHHHHHCC
>Mature Secondary Structure 
TEKDVLSQEEIDALLDSVDESIDDETNDEELNSREQPARKKPEDATSQELNSTFDSDKK
CCHHHCCHHHHHHHHHHHHHHCCCCCCCHHHCCCCCCCCCCCCCHHHHHHHHHHCCHHH
IAEEGVKTLNFTGQERIVKGQLPVLDKIYDRAVRLFAADIYHLTARDFEIKQDPLLITKH
HHHHHHHEECCCCCHHEEECCCCHHHHHHHHHHHHHHHHHHHHHCCCCEECCCCEEEECC
KEFMKSLPNPSLIGIYKFKPLRGKGIILFDSTFVYDLVDYYFGGNSQFGAQKDKTDFTAT
HHHHHHCCCCCEEEEEEECCCCCCEEEEECCHHHHHHHHHHCCCCCCCCCCCCCCCCHHH
ELRVMEVVTKKLVANLIHAWEPIIQLDVTKFNDETNPQLVNIAEPEEMLLVARFVLNFGK
HHHHHHHHHHHHHHHHHHHHCHHHEEEEEECCCCCCCCEEEECCHHHHHHHHHHHHHCCC
ETGAFYFILPYSMLEPIKQQLELGASRPDDEIDPNWINSLKEELMDVELSVSASMAETVS
CCCCEEEEECHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHH
TLGQVMSWKVGDFVPLEINEEVTLDIEGTPSFTATLGSTNEKRALKIIKIIRY
HHHHHHHCCCCCEEEEEECCEEEEEECCCCCEEEECCCCCHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 10984043; 7622217 [H]