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The map label for this gene is fliO

Identifier: 148359334

GI number: 148359334

Start: 2078214

End: 2078624

Strand: Reverse

Name: fliO

Synonym: LPC_1231

Alternate gene names: NA

Gene position: 2078624-2078214 (Counterclockwise)

Preceding gene: 148359335

Following gene: 148359333

Centisome position: 58.12

GC content: 35.04

Gene sequence:

>411_bases
ATGAAAAGTAAAGTACCTCATCTGGCATTTTTGAGTCTTTCTCTAATCAGTTCGGTCGGTTGGTCATCTTCTTCAAGCTC
AAACGCGATCAGCCATGGCGAACTGATAAGAATTATTTCGGGACTCTTATTTGTATTATTCATTATTATTTTTTTATCTT
GGATAGTGAAGCGTATGCATAGAGTAAATTTTACTTCATCTAAAGGATTCCAAACTGTTGCAAGTATGATTTTAGGTCCA
AAGGAAAAGGTTATATTGCTGAAAATTGGGGATAGATATTTATTAATAGGTGTAGGGGCATATTCCATTAATCTCATATG
TGATTTTGGCAATCAACTTCCTGAAGGGTTTGATGCTGATCAAAAATCGTCTTTTGCCGATGTGCTGAAATCAGCAATAG
GGAAATCATAA

Upstream 100 bases:

>100_bases
GTACTTTAGTTGCACATGGTGAAGTCGTTGTAGTTAACGATAAATTTGGTGTCAGATTAACTGATATCGTTAGCAAGGCT
GAACGAATAAAACGTCTCAA

Downstream 100 bases:

>100_bases
ATGAAAATTAAAAGTTGGTTACTGATTTTGATATTACTTCTTTTATTACCCGTTGCAGGTCACACAGACCCTTTATCCTT
TCCCGTTGTTACAATGCAAC

Product: flagellar assembly protein FliO

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 136; Mature: 136

Protein sequence:

>136_residues
MKSKVPHLAFLSLSLISSVGWSSSSSSNAISHGELIRIISGLLFVLFIIIFLSWIVKRMHRVNFTSSKGFQTVASMILGP
KEKVILLKIGDRYLLIGVGAYSINLICDFGNQLPEGFDADQKSSFADVLKSAIGKS

Sequences:

>Translated_136_residues
MKSKVPHLAFLSLSLISSVGWSSSSSSNAISHGELIRIISGLLFVLFIIIFLSWIVKRMHRVNFTSSKGFQTVASMILGP
KEKVILLKIGDRYLLIGVGAYSINLICDFGNQLPEGFDADQKSSFADVLKSAIGKS
>Mature_136_residues
MKSKVPHLAFLSLSLISSVGWSSSSSSNAISHGELIRIISGLLFVLFIIIFLSWIVKRMHRVNFTSSKGFQTVASMILGP
KEKVILLKIGDRYLLIGVGAYSINLICDFGNQLPEGFDADQKSSFADVLKSAIGKS

Specific function: Unknown

COG id: COG3190

COG function: function code N; Flagellar biogenesis protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 14821; Mature: 14821

Theoretical pI: Translated: 10.37; Mature: 10.37

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKSKVPHLAFLSLSLISSVGWSSSSSSNAISHGELIRIISGLLFVLFIIIFLSWIVKRMH
CCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RVNFTSSKGFQTVASMILGPKEKVILLKIGDRYLLIGVGAYSINLICDFGNQLPEGFDAD
HCCCCCCCHHHHHHHHHHCCCCCEEEEEECCEEEEEEECCEEEEEEEECCCCCCCCCCCC
QKSSFADVLKSAIGKS
CHHHHHHHHHHHHCCC
>Mature Secondary Structure
MKSKVPHLAFLSLSLISSVGWSSSSSSNAISHGELIRIISGLLFVLFIIIFLSWIVKRMH
CCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RVNFTSSKGFQTVASMILGPKEKVILLKIGDRYLLIGVGAYSINLICDFGNQLPEGFDAD
HCCCCCCCHHHHHHHHHHCCCCCEEEEEECCEEEEEEECCEEEEEEEECCCCCCCCCCCC
QKSSFADVLKSAIGKS
CHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA