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The map label for this gene is flhF [H]

Identifier: 148359328

GI number: 148359328

Start: 2072009

End: 2073148

Strand: Reverse

Name: flhF [H]

Synonym: LPC_1225

Alternate gene names: 148359328

Gene position: 2073148-2072009 (Counterclockwise)

Preceding gene: 148359329

Following gene: 148359327

Centisome position: 57.97

GC content: 40.18

Gene sequence:

>1140_bases
ATGAAATTAAAACGCTTTGTCGCTGCAGATACTCGCAGTGCCATGCAGCAAATAAAGGCTGCATTTGGCCCTGATGCCGT
TATTTTGTCAAGCCATAACATAAAAGATGGTGTTGAAATAGTTGCTGCTATTGATTTTGACGAAACAGTGATATCAACTC
AAGCTGCTGTAGCTATAGCAGAACCCCCAAGCCGAACAGAAAAATATTCAGCGCAAACGCCATTAGACGAAATGCGGCAA
GAAATTTTGACACTGAGAGGAATGCTCGAAGCACAGCTGCGTGGAAATGTTGGTATTCATGAGCCTTTACATACAGTTAT
GCTGCAAAAACTCTTGTATTTAGGTGTTAGTCCCAATACGGCGACAATTTGGGCTCGCTCAGTAAAACCTGATTTGAATC
AACAAAGAGCCTGGCAATTTATTTTGTCACAAGTCACAGAGCAATTGCCAATTCGTGATTCTAGTAGAATAGAAGAAGGT
GGTATCTACGCGTTTGTTGGTCCAACTGGAGTTGGTAAAACAACAACTCTAGCAAAAATTGCAGCACGCTTTGCTTTACG
ATTTGGTGCTGATAAGTTGGGTTTGGTCACTATGGACACCTACCGAATAGCAGCTCAGGAACAATTAATTCTCTATGGGA
AGATTTTGGGAGTTAAAGTCTGTATTGCGCAAGATGAAGTCTCTTTGGCAAGAGTATTGCGTCAATTAAATGACAAAAAA
TTAATTTTGATTGATACAGCCGGTATGAATCCTTCTGATGAACGTGTAACCAAACAAATGACTGTTTTAAGTAATTATCT
GCAATCTATAGAAAAAGTATTGGTATTACCAGCTACCAGTCATTACCAGGTATTAATCGATGCGATTAAGCGTTACCAGG
CAAATCATGTGGATCAGTGCATTATTACGAAATTGGATGAATCTCTTGCAGTAGGTGGAGCCATAAGTGCTGTTATTGAA
TCAAATTTAGCCTTGGGTTATTTAACCGATGGACAACGAGTCCCGGAGGATATCAAAATTGCTACGCGTCACCAGCTTGT
TGAGTTATTTGCGCAACAAGAACTTCAGTTATTTCAGGAGGAAAGGGACATCAGCAAAATACATCCGAATGTTAGGAGAG
AGAATTATGTCGAAGCTTAG

Upstream 100 bases:

>100_bases
TTGTCTTATCAGGAAATACCTGATAACAAACAAATAAGAATAATTGGAACTGTAGGTTAGTTTTTGGGGTTGCATAGGTG
TGTTGAAGGCAGGAGGCATT

Downstream 100 bases:

>100_bases
CAAAGGTATAAAAGATCAGGCTTCTGGTCTTAGAAATTTGTCCCGAAACAAACCTGTCAAAGTGATTGCTGTTTCAGCGG
GCAAAGGCGGTGTAGGCAAA

Product: flagellar biosynthesis regulator FlhF

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 379; Mature: 379

Protein sequence:

>379_residues
MKLKRFVAADTRSAMQQIKAAFGPDAVILSSHNIKDGVEIVAAIDFDETVISTQAAVAIAEPPSRTEKYSAQTPLDEMRQ
EILTLRGMLEAQLRGNVGIHEPLHTVMLQKLLYLGVSPNTATIWARSVKPDLNQQRAWQFILSQVTEQLPIRDSSRIEEG
GIYAFVGPTGVGKTTTLAKIAARFALRFGADKLGLVTMDTYRIAAQEQLILYGKILGVKVCIAQDEVSLARVLRQLNDKK
LILIDTAGMNPSDERVTKQMTVLSNYLQSIEKVLVLPATSHYQVLIDAIKRYQANHVDQCIITKLDESLAVGGAISAVIE
SNLALGYLTDGQRVPEDIKIATRHQLVELFAQQELQLFQEERDISKIHPNVRRENYVEA

Sequences:

>Translated_379_residues
MKLKRFVAADTRSAMQQIKAAFGPDAVILSSHNIKDGVEIVAAIDFDETVISTQAAVAIAEPPSRTEKYSAQTPLDEMRQ
EILTLRGMLEAQLRGNVGIHEPLHTVMLQKLLYLGVSPNTATIWARSVKPDLNQQRAWQFILSQVTEQLPIRDSSRIEEG
GIYAFVGPTGVGKTTTLAKIAARFALRFGADKLGLVTMDTYRIAAQEQLILYGKILGVKVCIAQDEVSLARVLRQLNDKK
LILIDTAGMNPSDERVTKQMTVLSNYLQSIEKVLVLPATSHYQVLIDAIKRYQANHVDQCIITKLDESLAVGGAISAVIE
SNLALGYLTDGQRVPEDIKIATRHQLVELFAQQELQLFQEERDISKIHPNVRRENYVEA
>Mature_379_residues
MKLKRFVAADTRSAMQQIKAAFGPDAVILSSHNIKDGVEIVAAIDFDETVISTQAAVAIAEPPSRTEKYSAQTPLDEMRQ
EILTLRGMLEAQLRGNVGIHEPLHTVMLQKLLYLGVSPNTATIWARSVKPDLNQQRAWQFILSQVTEQLPIRDSSRIEEG
GIYAFVGPTGVGKTTTLAKIAARFALRFGADKLGLVTMDTYRIAAQEQLILYGKILGVKVCIAQDEVSLARVLRQLNDKK
LILIDTAGMNPSDERVTKQMTVLSNYLQSIEKVLVLPATSHYQVLIDAIKRYQANHVDQCIITKLDESLAVGGAISAVIE
SNLALGYLTDGQRVPEDIKIATRHQLVELFAQQELQLFQEERDISKIHPNVRRENYVEA

Specific function: Necessary for flagellar biosynthesis. May be involved in translocation of the flagellum [H]

COG id: COG1419

COG function: function code N; Flagellar GTP-binding protein

Gene ontology:

Cell location: Cell membrane; Peripheral membrane protein; Cytoplasmic side [H]

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the GTP-binding SRP family [H]

Homologues:

Organism=Saccharomyces cerevisiae, GI6325345, Length=211, Percent_Identity=26.0663507109005, Blast_Score=67, Evalue=4e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003593
- InterPro:   IPR000897
- InterPro:   IPR020006 [H]

Pfam domain/function: PF00448 SRP54 [H]

EC number: NA

Molecular weight: Translated: 42084; Mature: 42084

Theoretical pI: Translated: 6.89; Mature: 6.89

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKLKRFVAADTRSAMQQIKAAFGPDAVILSSHNIKDGVEIVAAIDFDETVISTQAAVAIA
CCCHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCEEEEEEECCCHHHHHHHHEEEEC
EPPSRTEKYSAQTPLDEMRQEILTLRGMLEAQLRGNVGIHEPLHTVMLQKLLYLGVSPNT
CCCCHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCCC
ATIWARSVKPDLNQQRAWQFILSQVTEQLPIRDSSRIEEGGIYAFVGPTGVGKTTTLAKI
CEEEEECCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEECCCCCCCHHHHHHH
AARFALRFGADKLGLVTMDTYRIAAQEQLILYGKILGVKVCIAQDEVSLARVLRQLNDKK
HHHHHHHHCCCCCCEEEECHHHHHHHHHHHEEEHEEEEEEEEECCHHHHHHHHHHCCCCE
LILIDTAGMNPSDERVTKQMTVLSNYLQSIEKVLVLPATSHYQVLIDAIKRYQANHVDQC
EEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHEEEECCCCHHHHHHHHHHHHHHCCCHHH
IITKLDESLAVGGAISAVIESNLALGYLTDGQRVPEDIKIATRHQLVELFAQQELQLFQE
HHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
ERDISKIHPNVRRENYVEA
HHHHHHHCCCCCCCCCCCC
>Mature Secondary Structure
MKLKRFVAADTRSAMQQIKAAFGPDAVILSSHNIKDGVEIVAAIDFDETVISTQAAVAIA
CCCHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCEEEEEEECCCHHHHHHHHEEEEC
EPPSRTEKYSAQTPLDEMRQEILTLRGMLEAQLRGNVGIHEPLHTVMLQKLLYLGVSPNT
CCCCHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCCC
ATIWARSVKPDLNQQRAWQFILSQVTEQLPIRDSSRIEEGGIYAFVGPTGVGKTTTLAKI
CEEEEECCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEECCCCCCCHHHHHHH
AARFALRFGADKLGLVTMDTYRIAAQEQLILYGKILGVKVCIAQDEVSLARVLRQLNDKK
HHHHHHHHCCCCCCEEEECHHHHHHHHHHHEEEHEEEEEEEEECCHHHHHHHHHHCCCCE
LILIDTAGMNPSDERVTKQMTVLSNYLQSIEKVLVLPATSHYQVLIDAIKRYQANHVDQC
EEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHEEEECCCCHHHHHHHHHHHHHHCCCHHH
IITKLDESLAVGGAISAVIESNLALGYLTDGQRVPEDIKIATRHQLVELFAQQELQLFQE
HHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
ERDISKIHPNVRRENYVEA
HHHHHHHCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 10984043 [H]