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The map label for this gene is motB [H]

Identifier: 148359324

GI number: 148359324

Start: 2068779

End: 2069582

Strand: Reverse

Name: motB [H]

Synonym: LPC_1221

Alternate gene names: 148359324

Gene position: 2069582-2068779 (Counterclockwise)

Preceding gene: 148359325

Following gene: 148359323

Centisome position: 57.87

GC content: 34.08

Gene sequence:

>804_bases
ATGAAATCAAAACAAAAGAAAACTGAAGAACATCAGGATAATCATCGATGGGTCGTATCGTATGCTGATTTCATTACCTT
ATTATTTGCTTTTTTTGTTGTGATGTATGCTATTTCTTCAGTTAATGTTTCAAAATATAAATCTCTTTCTGAAGGAATGA
AGTCGGCATTTAATCAAAAGGATCAAAATAAAGCGACTCAATCGACAGATAACCTTAAAGATGGTCCTGAAGAAAAGAAG
ACCAAGGGAACTTTTAAAGATGGTTTGGATGAACTGAATAAATCACTATCTGAACTTGAAGATGGTGATTTCAAATTAAA
CAGACAAGAGGGATGGGTTGAGATAGATATAAAAGCAGGCTCATTATTTGATTCTGGTAGTGCTGATATTAAACCAGAAG
CATTGATTAAACTAATGAAGCTGGCGGAGAAAATTAAGAATCTACCTTTTACAGTGGTTGTTGAGGGATACACTGATAAT
GTGCCTATTGAAACGCCCCAATACCCTTCAAATTGGGAGTTATCAGCTGCAAGAGCAGCTACTGTTGGTCGCATTTTAAA
TGGTTTTGGAATTGCCAATCATCGTATTTTGGTTACAGGATATGGTGATCAATACCCAATAACGGACAATTACACTGAAG
CTGGAAGAAGCCAGAATCGAAGAGTGAATATTCTTATCGCTAAAAATAGAAAAGTGGACAGAATTCTCAATCCTGATTTA
AGCAGAGTCCATTTTAGTGTTATAAGTAATACAAATTCAGTAGAGTTTAATAAAAAGGATACTAAAATTAAGGATAAAAA
ATGA

Upstream 100 bases:

>100_bases
TTTGATGAAATGGTCGTTGAAGGCCTGGTCGCCATGGCGAGTGGTGAGAGTCCCAATATGCTGCAGTTAAAGTTAAACAA
CTATGGGCAACACAAGCAAG

Downstream 100 bases:

>100_bases
CACATATCTTTCTGTATTTGCATGCGATAATTTTTTTACTCTTGGGTAATTATTTATTAAATCAACGAAAAAACATCAAC
AAATTACAGAACAAAATAGA

Product: flagellar motor protein MotD

Products: NA

Alternate protein names: ORF2 [H]

Number of amino acids: Translated: 267; Mature: 267

Protein sequence:

>267_residues
MKSKQKKTEEHQDNHRWVVSYADFITLLFAFFVVMYAISSVNVSKYKSLSEGMKSAFNQKDQNKATQSTDNLKDGPEEKK
TKGTFKDGLDELNKSLSELEDGDFKLNRQEGWVEIDIKAGSLFDSGSADIKPEALIKLMKLAEKIKNLPFTVVVEGYTDN
VPIETPQYPSNWELSAARAATVGRILNGFGIANHRILVTGYGDQYPITDNYTEAGRSQNRRVNILIAKNRKVDRILNPDL
SRVHFSVISNTNSVEFNKKDTKIKDKK

Sequences:

>Translated_267_residues
MKSKQKKTEEHQDNHRWVVSYADFITLLFAFFVVMYAISSVNVSKYKSLSEGMKSAFNQKDQNKATQSTDNLKDGPEEKK
TKGTFKDGLDELNKSLSELEDGDFKLNRQEGWVEIDIKAGSLFDSGSADIKPEALIKLMKLAEKIKNLPFTVVVEGYTDN
VPIETPQYPSNWELSAARAATVGRILNGFGIANHRILVTGYGDQYPITDNYTEAGRSQNRRVNILIAKNRKVDRILNPDL
SRVHFSVISNTNSVEFNKKDTKIKDKK
>Mature_267_residues
MKSKQKKTEEHQDNHRWVVSYADFITLLFAFFVVMYAISSVNVSKYKSLSEGMKSAFNQKDQNKATQSTDNLKDGPEEKK
TKGTFKDGLDELNKSLSELEDGDFKLNRQEGWVEIDIKAGSLFDSGSADIKPEALIKLMKLAEKIKNLPFTVVVEGYTDN
VPIETPQYPSNWELSAARAATVGRILNGFGIANHRILVTGYGDQYPITDNYTEAGRSQNRRVNILIAKNRKVDRILNPDL
SRVHFSVISNTNSVEFNKKDTKIKDKK

Specific function: May be involved in some transport function [H]

COG id: COG1360

COG function: function code N; Flagellar motor protein

Gene ontology:

Cell location: Cell membrane; Single-pass type II membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 OmpA-like domain [H]

Homologues:

Organism=Escherichia coli, GI1788198, Length=267, Percent_Identity=26.9662921348315, Blast_Score=75, Evalue=6e-15,

Paralogues:

None

Copy number: 10-20 (rich media) [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006665 [H]

Pfam domain/function: PF00691 OmpA [H]

EC number: NA

Molecular weight: Translated: 30188; Mature: 30188

Theoretical pI: Translated: 9.65; Mature: 9.65

Prosite motif: PS51123 OMPA_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
1.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
1.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKSKQKKTEEHQDNHRWVVSYADFITLLFAFFVVMYAISSVNVSKYKSLSEGMKSAFNQK
CCCHHHHHHHHCCCCEEEEHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCC
DQNKATQSTDNLKDGPEEKKTKGTFKDGLDELNKSLSELEDGDFKLNRQEGWVEIDIKAG
HHHHHHCCCCCCCCCCHHHHHCCCHHHHHHHHHHHHHHCCCCCEEEECCCCEEEEEEEEC
SLFDSGSADIKPEALIKLMKLAEKIKNLPFTVVVEGYTDNVPIETPQYPSNWELSAARAA
CCCCCCCCCCCHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCCCCCCCHHHHHH
TVGRILNGFGIANHRILVTGYGDQYPITDNYTEAGRSQNRRVNILIAKNRKVDRILNPDL
HHHHHHHHCCCCCCEEEEEECCCCCCCCCCHHHHCCCCCCEEEEEEECCCCHHHHCCCCH
SRVHFSVISNTNSVEFNKKDTKIKDKK
HHEEEHHHCCCCCEEECCCCCCCCCCC
>Mature Secondary Structure
MKSKQKKTEEHQDNHRWVVSYADFITLLFAFFVVMYAISSVNVSKYKSLSEGMKSAFNQK
CCCHHHHHHHHCCCCEEEEHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCC
DQNKATQSTDNLKDGPEEKKTKGTFKDGLDELNKSLSELEDGDFKLNRQEGWVEIDIKAG
HHHHHHCCCCCCCCCCHHHHHCCCHHHHHHHHHHHHHHCCCCCEEEECCCCEEEEEEEEC
SLFDSGSADIKPEALIKLMKLAEKIKNLPFTVVVEGYTDNVPIETPQYPSNWELSAARAA
CCCCCCCCCCCHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCCCCCCCHHHHHH
TVGRILNGFGIANHRILVTGYGDQYPITDNYTEAGRSQNRRVNILIAKNRKVDRILNPDL
HHHHHHHHCCCCCCEEEEEECCCCCCCCCCHHHHCCCCCCEEEEEEECCCCHHHHCCCCH
SRVHFSVISNTNSVEFNKKDTKIKDKK
HHEEEHHHCCCCCEEECCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8200532 [H]