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The map label for this gene is cybB [H]

Identifier: 148359117

GI number: 148359117

Start: 1812526

End: 1813074

Strand: Reverse

Name: cybB [H]

Synonym: LPC_1005

Alternate gene names: 148359117

Gene position: 1813074-1812526 (Counterclockwise)

Preceding gene: 148359118

Following gene: 148359115

Centisome position: 50.69

GC content: 36.79

Gene sequence:

>549_bases
ATGGAGGCTAAAACTGCTTCAGAATATTCAACACTGAGCAAATTATTTCATTGGATCATTGCATTGGCAGTTATAGTCAT
GCTAATAGCAGGTTTTTTTCTTGATGAAATACCTGAGCAATTTCAGGGGGTTGCTTATATGCTTCATAAATCAACAGGAA
TTACTATCCTTTTCTTGATGATTTTGAGGTTTATTTGGATCCATGCTAAAGGAAAACCTGCTTTACCAGCGTCTGTTAAA
TCTTGGGAGAAAATATTGTCAAGGTTTGTGCAATATGGTTTTTATGTGCTCTTGCTTATTATGCCATTGAGTGGTTGGAT
CATGTCGGTTGCGGCAGACAGAATACCAAATTACTTTGGCTTGTTTAAAGCGCCACTTCCATGGATTGAACCCAATAAAT
CTCTAGCAGAATCAATGGCTGAATCCCATGAAATTATTGCGTGGATTTTAATCGCCTTCATCATACTACATGTTTTAGGT
GCTCTTAAGCATCATTTTATTGATAAAGACAATGTATTGAAGCGTATGCTGCCTGGAAAAAGCAAATAG

Upstream 100 bases:

>100_bases
TTTTAGTTGCCACCCGAGAGTTGCTGGATTTAACCCAAACGACATTACAATCCAATTTAAAAATGGAAGAGTCATTTTAA
CATGAAAGGAGTTAAATGAA

Downstream 100 bases:

>100_bases
CCCTCTGTTTTTGTTTGAAAATTGAGCCTGAACTTTAAAGTTCAAGCTCAATTTTTTCTTCTAATTGGATTGGAAATTTA
TTGCCTTCCAAACAGACAGA

Product: cytochrome b-561 transmembrane protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 182; Mature: 182

Protein sequence:

>182_residues
MEAKTASEYSTLSKLFHWIIALAVIVMLIAGFFLDEIPEQFQGVAYMLHKSTGITILFLMILRFIWIHAKGKPALPASVK
SWEKILSRFVQYGFYVLLLIMPLSGWIMSVAADRIPNYFGLFKAPLPWIEPNKSLAESMAESHEIIAWILIAFIILHVLG
ALKHHFIDKDNVLKRMLPGKSK

Sequences:

>Translated_182_residues
MEAKTASEYSTLSKLFHWIIALAVIVMLIAGFFLDEIPEQFQGVAYMLHKSTGITILFLMILRFIWIHAKGKPALPASVK
SWEKILSRFVQYGFYVLLLIMPLSGWIMSVAADRIPNYFGLFKAPLPWIEPNKSLAESMAESHEIIAWILIAFIILHVLG
ALKHHFIDKDNVLKRMLPGKSK
>Mature_182_residues
MEAKTASEYSTLSKLFHWIIALAVIVMLIAGFFLDEIPEQFQGVAYMLHKSTGITILFLMILRFIWIHAKGKPALPASVK
SWEKILSRFVQYGFYVLLLIMPLSGWIMSVAADRIPNYFGLFKAPLPWIEPNKSLAESMAESHEIIAWILIAFIILHVLG
ALKHHFIDKDNVLKRMLPGKSK

Specific function: Unknown

COG id: COG3038

COG function: function code C; Cytochrome B561

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the cytochrome b561 family [H]

Homologues:

Organism=Escherichia coli, GI1787296, Length=181, Percent_Identity=30.939226519337, Blast_Score=84, Evalue=4e-18,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005797
- InterPro:   IPR016174 [H]

Pfam domain/function: PF00033 Cytochrom_B_N [H]

EC number: NA

Molecular weight: Translated: 20725; Mature: 20725

Theoretical pI: Translated: 9.98; Mature: 9.98

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.4 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
4.4 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEAKTASEYSTLSKLFHWIIALAVIVMLIAGFFLDEIPEQFQGVAYMLHKSTGITILFLM
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHH
ILRFIWIHAKGKPALPASVKSWEKILSRFVQYGFYVLLLIMPLSGWIMSVAADRIPNYFG
HHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHH
LFKAPLPWIEPNKSLAESMAESHEIIAWILIAFIILHVLGALKHHFIDKDNVLKRMLPGK
HHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCC
SK
CC
>Mature Secondary Structure
MEAKTASEYSTLSKLFHWIIALAVIVMLIAGFFLDEIPEQFQGVAYMLHKSTGITILFLM
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHH
ILRFIWIHAKGKPALPASVKSWEKILSRFVQYGFYVLLLIMPLSGWIMSVAADRIPNYFG
HHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHH
LFKAPLPWIEPNKSLAESMAESHEIIAWILIAFIILHVLGALKHHFIDKDNVLKRMLPGK
HHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCC
SK
CC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8905232; 9278503 [H]