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The map label for this gene is tolR [H]

Identifier: 148359109

GI number: 148359109

Start: 1807365

End: 1807820

Strand: Reverse

Name: tolR [H]

Synonym: LPC_0997

Alternate gene names: 148359109

Gene position: 1807820-1807365 (Counterclockwise)

Preceding gene: 148359110

Following gene: 148359108

Centisome position: 50.55

GC content: 43.2

Gene sequence:

>456_bases
ATGAATCGATCTAAAACCAATCGTGAACGTCCAATCTCAGAAATTAATGTAGTGCCTTACATTGATGTTATGTTGGTTTT
ACTGGTTATTTTTATGATTACTGCTCCAATGCTGACACAAGGTGTTACAGTAGATCTGCCCAAAGCGGCCAGTCAAACTT
TACAGGCTGCTGACAGAGAACCTATCATTGTGTCAGTGAATCAATTAGGCAGCTATTTTTTAAATATTAGTAGTACGCCA
GCAGAACCTATTGAAGCCCAGGCATTATTAGTACGAGTTGCGGCAGAACTGGAGTTGGCCAAACAGTCAGGTCAAAAACT
CAATGTGCTTGTTAAGGGAGATCAGGGGGTTGCTTATGGGAAAGTTGTTCAAGCCATGGCACTCTTAAAGCAAGCAGGAG
CTGAGCAAGTGGGGTTGCTTACTGACTCTCAGACTGGTGATGAGGGGCAAGCATGA

Upstream 100 bases:

>100_bases
GTGCCAATACTTTGCTGAATAAATATGATTTATTTCAAGAAGAACTGATTTCTTTAATTGAACAACAAACTTCTGGTTCA
CCTAGAGGATAAGACTTAAA

Downstream 100 bases:

>100_bases
TAAGTGATCTTACCTATAGAAAAGCTTTTCTTTTTGCTGTAACACTGCATCTTTTTTTACTTGTATTGCTTTTTACAGAT
AATAGCAGCAAAAAACCTGT

Product: biopolymer transport protein TolR

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 151; Mature: 151

Protein sequence:

>151_residues
MNRSKTNRERPISEINVVPYIDVMLVLLVIFMITAPMLTQGVTVDLPKAASQTLQAADREPIIVSVNQLGSYFLNISSTP
AEPIEAQALLVRVAAELELAKQSGQKLNVLVKGDQGVAYGKVVQAMALLKQAGAEQVGLLTDSQTGDEGQA

Sequences:

>Translated_151_residues
MNRSKTNRERPISEINVVPYIDVMLVLLVIFMITAPMLTQGVTVDLPKAASQTLQAADREPIIVSVNQLGSYFLNISSTP
AEPIEAQALLVRVAAELELAKQSGQKLNVLVKGDQGVAYGKVVQAMALLKQAGAEQVGLLTDSQTGDEGQA
>Mature_151_residues
MNRSKTNRERPISEINVVPYIDVMLVLLVIFMITAPMLTQGVTVDLPKAASQTLQAADREPIIVSVNQLGSYFLNISSTP
AEPIEAQALLVRVAAELELAKQSGQKLNVLVKGDQGVAYGKVVQAMALLKQAGAEQVGLLTDSQTGDEGQA

Specific function: Involved in the tonB-independent uptake of proteins [H]

COG id: COG0848

COG function: function code U; Biopolymer transport protein

Gene ontology:

Cell location: Cell inner membrane; Single-pass type II membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the exbD/tolR family [H]

Homologues:

Organism=Escherichia coli, GI1789380, Length=129, Percent_Identity=34.1085271317829, Blast_Score=75, Evalue=2e-15,
Organism=Escherichia coli, GI1786959, Length=130, Percent_Identity=40.7692307692308, Blast_Score=71, Evalue=3e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR014168
- InterPro:   IPR003400 [H]

Pfam domain/function: PF02472 ExbD [H]

EC number: NA

Molecular weight: Translated: 16131; Mature: 16131

Theoretical pI: Translated: 4.64; Mature: 4.64

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNRSKTNRERPISEINVVPYIDVMLVLLVIFMITAPMLTQGVTVDLPKAASQTLQAADRE
CCCCCCCCCCCHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCEEECCHHHHHHHHHCCCC
PIIVSVNQLGSYFLNISSTPAEPIEAQALLVRVAAELELAKQSGQKLNVLVKGDQGVAYG
CEEEEHHHHCCCEECCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCEEEEEEECCCCCHHH
KVVQAMALLKQAGAEQVGLLTDSQTGDEGQA
HHHHHHHHHHHCCCCCEEEECCCCCCCCCCC
>Mature Secondary Structure
MNRSKTNRERPISEINVVPYIDVMLVLLVIFMITAPMLTQGVTVDLPKAASQTLQAADRE
CCCCCCCCCCCHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCEEECCHHHHHHHHHCCCC
PIIVSVNQLGSYFLNISSTPAEPIEAQALLVRVAAELELAKQSGQKLNVLVKGDQGVAYG
CEEEEHHHHCCCEECCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCEEEEEEECCCCCHHH
KVVQAMALLKQAGAEQVGLLTDSQTGDEGQA
HHHHHHHHHHHCCCCCEEEECCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8955385; 10984043 [H]