Click here to switch to the map view.

The map label for this gene is 148359099

Identifier: 148359099

GI number: 148359099

Start: 1797657

End: 1798382

Strand: Reverse

Name: 148359099

Synonym: LPC_0987

Alternate gene names: NA

Gene position: 1798382-1797657 (Counterclockwise)

Preceding gene: 148359106

Following gene: 148359098

Centisome position: 50.28

GC content: 35.95

Gene sequence:

>726_bases
ATGGAAAATTTAGAGCATGGACATTCGCAAAAAGAAATCAAAGAGCGATTAGCACAGATCCCATCTCAAAATTACTTGCG
AGATTGGATATATGGAGGAATTGATGGTGTTGTCACTACTTTTGCCATTGTCTCCGGTGTTGTGGGTGGACAATTATCTT
CTTTAGTTATTCTAATTTTAGGTTTTGCCAACTTGCTTGCTGATGGTTTTTCAATGGCAGCGAGTAATTATCTGGGTACC
AAATCTGAGGTCGATCAATTTCAACGCTATAAAACAATTGAAGAAAAACATATTGATTTTATTCCAGAGGGTGAAAAAAA
CGAAATAAAACAAATTTTTCAAAATAAAGGTTTGCATGGCCAAGCATTAGATCAAGTTGTTGAGGAAATTACAGCGAATA
GAGCTTTATGGATAAAAACCATGTTACAAGAAGAATATGGGTTGCCTGCTACACTTCGATTCCCGCTTAAATCTGCGCTT
TATACTTTTAGTGCGTTTCTACTTTTTGGAATTATTCCATTAATCCCTTACGTGTTGGTCATGAACAATTCGTTCATCTG
GTCTTGTTTTTTCACTGCAATTACATTTTTTGTCATCGGTTCAATCAAAAGTCACTGGTCAACCAAATCCTGGTTATATT
CCGGTTTTGAGACACTAATAATTGGCACGGTTACAGCCTCTCTCTCTTATGGTATTGGACTATTTTTACATCATCTTCTG
ACTTAA

Upstream 100 bases:

>100_bases
ACTCAAATATACTAAATTTTATTATATGCTTTGTCAAACTAGCGATAATATTGGCAGAATTGATAATTAATAAATAACAC
ATATGGAGAAAGGATCTGCA

Downstream 100 bases:

>100_bases
AATAAAACATGGCTCTGCTATTAGCAGTACTTGTTAGATATAAATTTTGTAGTTAATTACATGGGGCAATATTGGAGATG
ATTCATTTATTAATCAATTG

Product: integral membrane protein

Products: NA

Alternate protein names: Nodulin; Nodulin-Related Protein; Iron And Manganese Transporter; Nodulin-Related Transmembrane Protein; Nodulin- Domain-Containing Protein; Transmembrane Protein; Ferritin-Like Domain Fused ; CCC1-Related Iron/Manganese Transporter Component

Number of amino acids: Translated: 241; Mature: 241

Protein sequence:

>241_residues
MENLEHGHSQKEIKERLAQIPSQNYLRDWIYGGIDGVVTTFAIVSGVVGGQLSSLVILILGFANLLADGFSMAASNYLGT
KSEVDQFQRYKTIEEKHIDFIPEGEKNEIKQIFQNKGLHGQALDQVVEEITANRALWIKTMLQEEYGLPATLRFPLKSAL
YTFSAFLLFGIIPLIPYVLVMNNSFIWSCFFTAITFFVIGSIKSHWSTKSWLYSGFETLIIGTVTASLSYGIGLFLHHLL
T

Sequences:

>Translated_241_residues
MENLEHGHSQKEIKERLAQIPSQNYLRDWIYGGIDGVVTTFAIVSGVVGGQLSSLVILILGFANLLADGFSMAASNYLGT
KSEVDQFQRYKTIEEKHIDFIPEGEKNEIKQIFQNKGLHGQALDQVVEEITANRALWIKTMLQEEYGLPATLRFPLKSAL
YTFSAFLLFGIIPLIPYVLVMNNSFIWSCFFTAITFFVIGSIKSHWSTKSWLYSGFETLIIGTVTASLSYGIGLFLHHLL
T
>Mature_241_residues
MENLEHGHSQKEIKERLAQIPSQNYLRDWIYGGIDGVVTTFAIVSGVVGGQLSSLVILILGFANLLADGFSMAASNYLGT
KSEVDQFQRYKTIEEKHIDFIPEGEKNEIKQIFQNKGLHGQALDQVVEEITANRALWIKTMLQEEYGLPATLRFPLKSAL
YTFSAFLLFGIIPLIPYVLVMNNSFIWSCFFTAITFFVIGSIKSHWSTKSWLYSGFETLIIGTVTASLSYGIGLFLHHLL
T

Specific function: Unknown

COG id: COG1814

COG function: function code S; Uncharacterized membrane protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 27067; Mature: 27067

Theoretical pI: Translated: 6.40; Mature: 6.40

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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C
>Mature Secondary Structure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C

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA