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The map label for this gene is ymbA [C]

Identifier: 148358385

GI number: 148358385

Start: 259987

End: 260697

Strand: Reverse

Name: ymbA [C]

Synonym: LPC_0249

Alternate gene names: 148358385

Gene position: 260697-259987 (Counterclockwise)

Preceding gene: 148358386

Following gene: 148358384

Centisome position: 7.29

GC content: 35.72

Gene sequence:

>711_bases
ATGAAAAACCAGAAACATTTTTTAAAATTCTATTGCATCCGCGATAGGAGTTGGCCGGCTAGTGCCCGAGCCTCTTTTGA
AGGCATTCGATTCCTATCTTTTTCAAACTATGCCGAATTTCGCAAGAAACCTGTGAAGCTCCTCCTCCTATTGCTCATTG
TCTTAACCCTCTGTGATTGCGGTCGAAGCAAAGAAACTCAATTTTATTTATTAACACCTATCTCCCCTCAAAAAAATAGT
CATAATTCCTATAATCATTTACAGATTGGTGTTGATGAAGTGAGTATTCCTGATTATATGAAAAAACCTCAATTAATGAT
TCACCAGACACCTCATCACCTAACTCTCGAAGAATTTAACCAATGGGCTGGGGCCTTGGATAAGAATATTACTCTTGTAT
TAACTACTAATCTTTCAACTTTAATGCCAGGAGTAGTAGTTCAGACCTCACCTTGGGACAATAAATTCCACCCGGATTAT
CATCTTCAAGTAATGATTTCACAATTTGAAATTGATATTCATGGTAACAGTATTTTAAGAGCCGAATACCTTATTTACCG
AAAAGAAGAGTTAATCTACAAAGGAAATGCTTATTACCATATTAAAGTCCCTTTAATCAGTATTGAAACGCTTGTGCAGA
GCATGAATACGAACCTTACTCATTTAACTGAAGAAATTGCACGGTTTTTTATAAAAAACACGACTAAGTAA

Upstream 100 bases:

>100_bases
TAAATCAAAGCTTAAAACAAATTACCAGTGCAGCTTACTCCACTCAAAATTTGACGGATTATTTGTCTCGATATCCTGAG
TCTTTACTCCGAGGCAAGCG

Downstream 100 bases:

>100_bases
TATACTCATAGTGTCTTCAAATCAAGGAAAATTATTTTGATTGAATTCAGCTATTATAATGCTTTAAGGGCATTCTTTTA
TGGGATAATAAAGAGACTTC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 236; Mature: 236

Protein sequence:

>236_residues
MKNQKHFLKFYCIRDRSWPASARASFEGIRFLSFSNYAEFRKKPVKLLLLLLIVLTLCDCGRSKETQFYLLTPISPQKNS
HNSYNHLQIGVDEVSIPDYMKKPQLMIHQTPHHLTLEEFNQWAGALDKNITLVLTTNLSTLMPGVVVQTSPWDNKFHPDY
HLQVMISQFEIDIHGNSILRAEYLIYRKEELIYKGNAYYHIKVPLISIETLVQSMNTNLTHLTEEIARFFIKNTTK

Sequences:

>Translated_236_residues
MKNQKHFLKFYCIRDRSWPASARASFEGIRFLSFSNYAEFRKKPVKLLLLLLIVLTLCDCGRSKETQFYLLTPISPQKNS
HNSYNHLQIGVDEVSIPDYMKKPQLMIHQTPHHLTLEEFNQWAGALDKNITLVLTTNLSTLMPGVVVQTSPWDNKFHPDY
HLQVMISQFEIDIHGNSILRAEYLIYRKEELIYKGNAYYHIKVPLISIETLVQSMNTNLTHLTEEIARFFIKNTTK
>Mature_236_residues
MKNQKHFLKFYCIRDRSWPASARASFEGIRFLSFSNYAEFRKKPVKLLLLLLIVLTLCDCGRSKETQFYLLTPISPQKNS
HNSYNHLQIGVDEVSIPDYMKKPQLMIHQTPHHLTLEEFNQWAGALDKNITLVLTTNLSTLMPGVVVQTSPWDNKFHPDY
HLQVMISQFEIDIHGNSILRAEYLIYRKEELIYKGNAYYHIKVPLISIETLVQSMNTNLTHLTEEIARFFIKNTTK

Specific function: Unknown

COG id: COG3009

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 27574; Mature: 27574

Theoretical pI: Translated: 9.21; Mature: 9.21

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKNQKHFLKFYCIRDRSWPASARASFEGIRFLSFSNYAEFRKKPVKLLLLLLIVLTLCDC
CCCCCEEEEEEEEECCCCCCHHHCCCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHCC
GRSKETQFYLLTPISPQKNSHNSYNHLQIGVDEVSIPDYMKKPQLMIHQTPHHLTLEEFN
CCCCCCEEEEEECCCCCCCCCCCCCEEEEECCCCCCCHHHCCCEEEEECCCCCCCHHHHH
QWAGALDKNITLVLTTNLSTLMPGVVVQTSPWDNKFHPDYHLQVMISQFEIDIHGNSILR
HHHHHCCCCEEEEEECCHHHHCCCEEEEECCCCCCCCCCEEEEEEEEEEEEEECCCEEEE
AEYLIYRKEELIYKGNAYYHIKVPLISIETLVQSMNTNLTHLTEEIARFFIKNTTK
EHHEEEEEEHEEEECCEEEEEEEEEEEHHHHHHHHCCCHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MKNQKHFLKFYCIRDRSWPASARASFEGIRFLSFSNYAEFRKKPVKLLLLLLIVLTLCDC
CCCCCEEEEEEEEECCCCCCHHHCCCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHCC
GRSKETQFYLLTPISPQKNSHNSYNHLQIGVDEVSIPDYMKKPQLMIHQTPHHLTLEEFN
CCCCCCEEEEEECCCCCCCCCCCCCEEEEECCCCCCCHHHCCCEEEEECCCCCCCHHHHH
QWAGALDKNITLVLTTNLSTLMPGVVVQTSPWDNKFHPDYHLQVMISQFEIDIHGNSILR
HHHHHCCCCEEEEEECCHHHHCCCEEEEECCCCCCCCCCEEEEEEEEEEEEEECCCEEEE
AEYLIYRKEELIYKGNAYYHIKVPLISIETLVQSMNTNLTHLTEEIARFFIKNTTK
EHHEEEEEEHEEEECCEEEEEEEEEEEHHHHHHHHCCCHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA