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The map label for this gene is 148358333

Identifier: 148358333

GI number: 148358333

Start: 211746

End: 212399

Strand: Reverse

Name: 148358333

Synonym: LPC_0196

Alternate gene names: NA

Gene position: 212399-211746 (Counterclockwise)

Preceding gene: 148358337

Following gene: 148358332

Centisome position: 5.94

GC content: 37.31

Gene sequence:

>654_bases
ATGTCTACCACTATTTTGAATGAGTCAAGCCAATTGCTATTGGCACAAACATTGAATGAATTGATTGGGCGTGATGAAAA
ACTATCACCTGCGGCTCTCGCGCGGCAATTGGGTATTCCAACTAATAAAATTACCCGAATCTTAAATGGTGATGTGACTG
ATCCGAAAGCAAGCACATTGCTGCAAATTGCCAATTATTTTGATATCACCATAGAACAATTACTGGGATTAGAGCCTATT
GCTCGGCAGGAAGAAATAGAGCAACAGCAAGCCACAAGGCAATTGCCTATTTTTGAATTTAGCAAGGTAAACCAGTCTAA
TGCAGCCAAGGAATGGTATCGCTGGGTTGAAAATGAAATTGCAGGTGAATACTACGCCCTCGCGATTGATACTGATCTAT
ATGAGCCAACTTTCCCCAAAAATTCAATATTGATCATTAATACAGATATTGAACCGGAAGACCGCTCATATATTCTTATT
AAGAAAAAAAATGATCCTTCTTATTGCTCGATAAAAAAATATGTTCTTGAAGGAAATCAAATCTATTTATACCCAATTAA
CCCCAAATTGCCAGTAGAAATTTTTGACGATCATTTATACACTATTGCAGGTGTAATTTTGGAAGTACACCAGAGGTTGC
GCTCGAAAAAATAA

Upstream 100 bases:

>100_bases
CCTACTGATATTTTTGTAAGTTATGTTAATATTTACTTTTACATCAGTGTAATTAGTTACATAGATGTAAATTATTACAT
AAATGTAACGAAGTCAAGGC

Downstream 100 bases:

>100_bases
GTTGTAGGGAAGTTCTCATGGAAGAAAAAAAATTTACAGGTAGGTTTCTCCGTTTTGTTTACCAGCAGATAGTATTAAGG
TTTATCGGGCAAGTCAGGGA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 217; Mature: 216

Protein sequence:

>217_residues
MSTTILNESSQLLLAQTLNELIGRDEKLSPAALARQLGIPTNKITRILNGDVTDPKASTLLQIANYFDITIEQLLGLEPI
ARQEEIEQQQATRQLPIFEFSKVNQSNAAKEWYRWVENEIAGEYYALAIDTDLYEPTFPKNSILIINTDIEPEDRSYILI
KKKNDPSYCSIKKYVLEGNQIYLYPINPKLPVEIFDDHLYTIAGVILEVHQRLRSKK

Sequences:

>Translated_217_residues
MSTTILNESSQLLLAQTLNELIGRDEKLSPAALARQLGIPTNKITRILNGDVTDPKASTLLQIANYFDITIEQLLGLEPI
ARQEEIEQQQATRQLPIFEFSKVNQSNAAKEWYRWVENEIAGEYYALAIDTDLYEPTFPKNSILIINTDIEPEDRSYILI
KKKNDPSYCSIKKYVLEGNQIYLYPINPKLPVEIFDDHLYTIAGVILEVHQRLRSKK
>Mature_216_residues
STTILNESSQLLLAQTLNELIGRDEKLSPAALARQLGIPTNKITRILNGDVTDPKASTLLQIANYFDITIEQLLGLEPIA
RQEEIEQQQATRQLPIFEFSKVNQSNAAKEWYRWVENEIAGEYYALAIDTDLYEPTFPKNSILIINTDIEPEDRSYILIK
KKNDPSYCSIKKYVLEGNQIYLYPINPKLPVEIFDDHLYTIAGVILEVHQRLRSKK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH cro/C1-type DNA-binding domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001387
- InterPro:   IPR010982
- InterPro:   IPR019759
- InterPro:   IPR015927
- InterPro:   IPR011056 [H]

Pfam domain/function: PF00717 Peptidase_S24 [H]

EC number: NA

Molecular weight: Translated: 24883; Mature: 24752

Theoretical pI: Translated: 4.74; Mature: 4.74

Prosite motif: PS50943 HTH_CROC1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
0.5 %Met     (Translated Protein)
0.9 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
0.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSTTILNESSQLLLAQTLNELIGRDEKLSPAALARQLGIPTNKITRILNGDVTDPKASTL
CCCCEECCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCHHHHHHHHCCCCCCCHHHHH
LQIANYFDITIEQLLGLEPIARQEEIEQQQATRQLPIFEFSKVNQSNAAKEWYRWVENEI
HHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCHHHHHCCCCCHHHHHHHHHHHHH
AGEYYALAIDTDLYEPTFPKNSILIINTDIEPEDRSYILIKKKNDPSYCSIKKYVLEGNQ
CCCEEEEEEECCCCCCCCCCCCEEEEECCCCCCCCCEEEEEECCCCCHHHHHHEEECCCE
IYLYPINPKLPVEIFDDHLYTIAGVILEVHQRLRSKK
EEEEECCCCCCCEEHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
STTILNESSQLLLAQTLNELIGRDEKLSPAALARQLGIPTNKITRILNGDVTDPKASTL
CCCEECCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCHHHHHHHHCCCCCCCHHHHH
LQIANYFDITIEQLLGLEPIARQEEIEQQQATRQLPIFEFSKVNQSNAAKEWYRWVENEI
HHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCHHHHHCCCCCHHHHHHHHHHHHH
AGEYYALAIDTDLYEPTFPKNSILIINTDIEPEDRSYILIKKKNDPSYCSIKKYVLEGNQ
CCCEEEEEEECCCCCCCCCCCCEEEEECCCCCCCCCEEEEEECCCCCHHHHHHEEECCCE
IYLYPINPKLPVEIFDDHLYTIAGVILEVHQRLRSKK
EEEEECCCCCCCEEHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12704232 [H]