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The map label for this gene is ybaT [C]

Identifier: 148358191

GI number: 148358191

Start: 55659

End: 56954

Strand: Direct

Name: ybaT [C]

Synonym: LPC_0052

Alternate gene names: 148358191

Gene position: 55659-56954 (Clockwise)

Preceding gene: 148358190

Following gene: 148358192

Centisome position: 1.56

GC content: 42.67

Gene sequence:

>1296_bases
ATGGATATGGATATTAAACATAAGCCTTTGAAGCGTGAACTCAGTCTATTTGGCGCTACGATGATGGGGCTTGGCTCTAT
TGTCGGGACGGGTGTTTTTGTCAGCATCGGAATTGCGGCGGGTGTCACAGGACCATCCGTCATTCTTGCTATTGCTTTGG
CAGCACTTGTTGCTACCTGTAATGCATTCTCCAGCGCTCAACTTGCTGCAAATCATGCTGTTAGTGGAGGTACTTATGAA
TATGGATATCGTTATTTACATCCTGCTTTTGGTTTTACTGCCGGTTGGATGTTTTTATGTGCGAAGAGCGCTTCCGCTGC
AACGGCAGCGCTTGGCTTTGCCGGTTATTTTATTCACTTGTCAGGTTTAGAGACGGTGCCTGTCATACCTATCGCTTTAG
CAGTGTCTATCACGCTAATACTTTTAGTCTTAAGTGGACTCAGAAGAACAAATACAGTGAATATTATTATTGTAATGATT
ACATTGATAACTTTAACCGTTTTTATAATAAGCGGATTACCTGATTTCATGCAAAGGGGAACTGCTAATCTGAGGCCCTT
CTTTCCTGTTTCAAAACAAGAAGGATTAAGTCATTTTTTTTATGCTACTGCTTTAATGTTTGTGGCATATACCGGTTATG
GGAGAATTGCAACATTAGCGGAAGAGGTTAAAAATCCAGGAAAATTTATTCCTGCAGCGATTATTATCACTCTGATGGTG
AGCGCCGTACTTTATATTCTGGTGGGTCTTGTTGCTATCGGAGCTGTAGGGGTTGAAAAACTGGCCCAAGTAACTGAAAC
AAACGCAACCCCTTTAGAGAGCGCGGCACAAGCCATTGGTATCCCCGGATTGAGTATTCTGGTCTCCATTGGGGCATGCA
CGGCCATGTTAGGGGTATTACTCAATTTAATACTTGGGTTATCTCGTGTGGCTTTAGCTATGGGTAGAAAAGGAGATTTA
CCGAAGATGTTTTGCTATGTATCAGAAACAAGGCATGTTCCTGTTTCTGCTGTCATTGGAGTTGGAGTTGTAATTATTGC
TCTGGTATTGACTGGAAGTGTTGAAACAACATGGACATTCAGTGCGTTTACAGTTTTAATCTATTACGCCATTACTAACC
TCGCTGCCTTGCGTTTGCCTAAAGAGGAGCAATTGTATCCACCTCTGTTTGCTATCGGAGGCTTACTGTCCTGCCTTTTC
CTGGCATTTTGGGTTCCGATTGGAGTATGGATAACGGGAATCAGTTTACTTGTCCTGGGGCTTCTTTGGAAAGTTGTTGC
CCATCGTTTTTTATAA

Upstream 100 bases:

>100_bases
AATTATCGATTGGCCATATTAAAAAAACCAATACTCTTAACACGCTAATTGTGAATACCTGTTAAAACAGTAAAAGTATT
TATTGATAGGAAATAAAACG

Downstream 100 bases:

>100_bases
GGTAAAAATATAGACAAATTTATTCAAAATAAATAAGAGGGTTAGAGGAAAGGAACAGCAATGATCGGTGAGATTAGGGT
TAATTTTACAGTTGCTGTCT

Product: amino acid transporter, permease

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 431; Mature: 431

Protein sequence:

>431_residues
MDMDIKHKPLKRELSLFGATMMGLGSIVGTGVFVSIGIAAGVTGPSVILAIALAALVATCNAFSSAQLAANHAVSGGTYE
YGYRYLHPAFGFTAGWMFLCAKSASAATAALGFAGYFIHLSGLETVPVIPIALAVSITLILLVLSGLRRTNTVNIIIVMI
TLITLTVFIISGLPDFMQRGTANLRPFFPVSKQEGLSHFFYATALMFVAYTGYGRIATLAEEVKNPGKFIPAAIIITLMV
SAVLYILVGLVAIGAVGVEKLAQVTETNATPLESAAQAIGIPGLSILVSIGACTAMLGVLLNLILGLSRVALAMGRKGDL
PKMFCYVSETRHVPVSAVIGVGVVIIALVLTGSVETTWTFSAFTVLIYYAITNLAALRLPKEEQLYPPLFAIGGLLSCLF
LAFWVPIGVWITGISLLVLGLLWKVVAHRFL

Sequences:

>Translated_431_residues
MDMDIKHKPLKRELSLFGATMMGLGSIVGTGVFVSIGIAAGVTGPSVILAIALAALVATCNAFSSAQLAANHAVSGGTYE
YGYRYLHPAFGFTAGWMFLCAKSASAATAALGFAGYFIHLSGLETVPVIPIALAVSITLILLVLSGLRRTNTVNIIIVMI
TLITLTVFIISGLPDFMQRGTANLRPFFPVSKQEGLSHFFYATALMFVAYTGYGRIATLAEEVKNPGKFIPAAIIITLMV
SAVLYILVGLVAIGAVGVEKLAQVTETNATPLESAAQAIGIPGLSILVSIGACTAMLGVLLNLILGLSRVALAMGRKGDL
PKMFCYVSETRHVPVSAVIGVGVVIIALVLTGSVETTWTFSAFTVLIYYAITNLAALRLPKEEQLYPPLFAIGGLLSCLF
LAFWVPIGVWITGISLLVLGLLWKVVAHRFL
>Mature_431_residues
MDMDIKHKPLKRELSLFGATMMGLGSIVGTGVFVSIGIAAGVTGPSVILAIALAALVATCNAFSSAQLAANHAVSGGTYE
YGYRYLHPAFGFTAGWMFLCAKSASAATAALGFAGYFIHLSGLETVPVIPIALAVSITLILLVLSGLRRTNTVNIIIVMI
TLITLTVFIISGLPDFMQRGTANLRPFFPVSKQEGLSHFFYATALMFVAYTGYGRIATLAEEVKNPGKFIPAAIIITLMV
SAVLYILVGLVAIGAVGVEKLAQVTETNATPLESAAQAIGIPGLSILVSIGACTAMLGVLLNLILGLSRVALAMGRKGDL
PKMFCYVSETRHVPVSAVIGVGVVIIALVLTGSVETTWTFSAFTVLIYYAITNLAALRLPKEEQLYPPLFAIGGLLSCLF
LAFWVPIGVWITGISLLVLGLLWKVVAHRFL

Specific function: Probable amino-acid or metabolite transport protein [H]

COG id: COG0531

COG function: function code E; Amino acid transporters

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the amino acid-polyamine-organocation (APC) superfamily [H]

Homologues:

Organism=Homo sapiens, GI4507047, Length=387, Percent_Identity=24.8062015503876, Blast_Score=93, Evalue=6e-19,
Organism=Homo sapiens, GI187423910, Length=405, Percent_Identity=25.679012345679, Blast_Score=88, Evalue=1e-17,
Organism=Homo sapiens, GI7657591, Length=405, Percent_Identity=25.679012345679, Blast_Score=88, Evalue=1e-17,
Organism=Homo sapiens, GI110347453, Length=355, Percent_Identity=29.0140845070423, Blast_Score=88, Evalue=1e-17,
Organism=Homo sapiens, GI258645169, Length=381, Percent_Identity=24.4094488188976, Blast_Score=87, Evalue=4e-17,
Organism=Homo sapiens, GI7657683, Length=352, Percent_Identity=24.7159090909091, Blast_Score=86, Evalue=5e-17,
Organism=Homo sapiens, GI258614005, Length=381, Percent_Identity=23.6220472440945, Blast_Score=82, Evalue=1e-15,
Organism=Homo sapiens, GI258614003, Length=381, Percent_Identity=23.6220472440945, Blast_Score=82, Evalue=1e-15,
Organism=Homo sapiens, GI181337167, Length=341, Percent_Identity=25.8064516129032, Blast_Score=76, Evalue=7e-14,
Organism=Homo sapiens, GI115648063, Length=388, Percent_Identity=23.1958762886598, Blast_Score=75, Evalue=1e-13,
Organism=Homo sapiens, GI115648022, Length=388, Percent_Identity=23.1958762886598, Blast_Score=75, Evalue=1e-13,
Organism=Homo sapiens, GI114326544, Length=384, Percent_Identity=22.9166666666667, Blast_Score=75, Evalue=2e-13,
Organism=Homo sapiens, GI114326550, Length=384, Percent_Identity=22.9166666666667, Blast_Score=75, Evalue=2e-13,
Organism=Homo sapiens, GI186910308, Length=401, Percent_Identity=21.9451371571072, Blast_Score=74, Evalue=4e-13,
Organism=Homo sapiens, GI186910306, Length=401, Percent_Identity=21.9451371571072, Blast_Score=74, Evalue=4e-13,
Organism=Homo sapiens, GI186910304, Length=401, Percent_Identity=21.9451371571072, Blast_Score=74, Evalue=4e-13,
Organism=Homo sapiens, GI33286428, Length=454, Percent_Identity=21.3656387665198, Blast_Score=72, Evalue=7e-13,
Organism=Homo sapiens, GI71999149, Length=352, Percent_Identity=25.8522727272727, Blast_Score=69, Evalue=9e-12,
Organism=Homo sapiens, GI71979932, Length=443, Percent_Identity=23.9277652370203, Blast_Score=66, Evalue=7e-11,
Organism=Escherichia coli, GI1786694, Length=404, Percent_Identity=25.2475247524752, Blast_Score=88, Evalue=1e-18,
Organism=Escherichia coli, GI87081869, Length=397, Percent_Identity=24.9370277078086, Blast_Score=80, Evalue=2e-16,
Organism=Escherichia coli, GI87082023, Length=351, Percent_Identity=26.2108262108262, Blast_Score=72, Evalue=9e-14,
Organism=Escherichia coli, GI87081708, Length=360, Percent_Identity=25, Blast_Score=71, Evalue=1e-13,
Organism=Escherichia coli, GI87082250, Length=394, Percent_Identity=24.8730964467005, Blast_Score=69, Evalue=4e-13,
Organism=Escherichia coli, GI1786302, Length=429, Percent_Identity=22.8438228438228, Blast_Score=65, Evalue=1e-11,
Organism=Caenorhabditis elegans, GI17533459, Length=444, Percent_Identity=25, Blast_Score=92, Evalue=7e-19,
Organism=Caenorhabditis elegans, GI17532491, Length=422, Percent_Identity=24.1706161137441, Blast_Score=90, Evalue=3e-18,
Organism=Caenorhabditis elegans, GI17531343, Length=356, Percent_Identity=26.9662921348315, Blast_Score=87, Evalue=1e-17,
Organism=Caenorhabditis elegans, GI32566699, Length=408, Percent_Identity=23.2843137254902, Blast_Score=79, Evalue=4e-15,
Organism=Caenorhabditis elegans, GI17540018, Length=362, Percent_Identity=24.3093922651934, Blast_Score=76, Evalue=3e-14,
Organism=Caenorhabditis elegans, GI17568033, Length=351, Percent_Identity=23.3618233618234, Blast_Score=69, Evalue=6e-12,
Organism=Drosophila melanogaster, GI24667468, Length=411, Percent_Identity=27.4939172749392, Blast_Score=111, Evalue=1e-24,
Organism=Drosophila melanogaster, GI24668806, Length=413, Percent_Identity=23.2445520581114, Blast_Score=103, Evalue=2e-22,
Organism=Drosophila melanogaster, GI21356285, Length=413, Percent_Identity=23.2445520581114, Blast_Score=103, Evalue=2e-22,
Organism=Drosophila melanogaster, GI24668802, Length=413, Percent_Identity=23.2445520581114, Blast_Score=103, Evalue=2e-22,
Organism=Drosophila melanogaster, GI221512776, Length=368, Percent_Identity=25.2717391304348, Blast_Score=95, Evalue=1e-19,
Organism=Drosophila melanogaster, GI24666159, Length=368, Percent_Identity=25.2717391304348, Blast_Score=95, Evalue=1e-19,
Organism=Drosophila melanogaster, GI24641995, Length=393, Percent_Identity=25.9541984732824, Blast_Score=94, Evalue=2e-19,
Organism=Drosophila melanogaster, GI24641993, Length=393, Percent_Identity=25.9541984732824, Blast_Score=94, Evalue=2e-19,
Organism=Drosophila melanogaster, GI21357367, Length=455, Percent_Identity=23.7362637362637, Blast_Score=80, Evalue=2e-15,
Organism=Drosophila melanogaster, GI161077963, Length=365, Percent_Identity=25.4794520547945, Blast_Score=73, Evalue=5e-13,
Organism=Drosophila melanogaster, GI24651635, Length=343, Percent_Identity=24.7813411078717, Blast_Score=72, Evalue=6e-13,
Organism=Drosophila melanogaster, GI24651633, Length=343, Percent_Identity=24.7813411078717, Blast_Score=72, Evalue=6e-13,
Organism=Drosophila melanogaster, GI45550968, Length=360, Percent_Identity=23.6111111111111, Blast_Score=70, Evalue=2e-12,
Organism=Drosophila melanogaster, GI19921172, Length=360, Percent_Identity=23.6111111111111, Blast_Score=70, Evalue=2e-12,
Organism=Drosophila melanogaster, GI281366235, Length=363, Percent_Identity=25.6198347107438, Blast_Score=65, Evalue=7e-11,
Organism=Drosophila melanogaster, GI116007820, Length=363, Percent_Identity=25.6198347107438, Blast_Score=65, Evalue=7e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004841
- InterPro:   IPR002293 [H]

Pfam domain/function: PF00324 AA_permease [H]

EC number: NA

Molecular weight: Translated: 45472; Mature: 45472

Theoretical pI: Translated: 9.25; Mature: 9.25

Prosite motif: PS01199 RIBOSOMAL_L1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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HHHHHHHHHCC
>Mature Secondary Structure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HHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9634230; 12218036 [H]