Click here to switch to the map view.

The map label for this gene is catB4 [H]

Identifier: 148358189

GI number: 148358189

Start: 54069

End: 54731

Strand: Direct

Name: catB4 [H]

Synonym: LPC_0050

Alternate gene names: 148358189

Gene position: 54069-54731 (Clockwise)

Preceding gene: 148358188

Following gene: 148358190

Centisome position: 1.51

GC content: 38.91

Gene sequence:

>663_bases
ATGAAACCTACTGATAAAAAGCACTGGTCTAAAATCGAATATCTACACCAAAGCATAAAAAATCCAAACATCCATATCAA
GGGTAAACACAGCTATTATAGCGATGCCTGGACTGGTAGTTTTGAGGAAACCGTCGTTCGCTATCTTTATGGAGACGAAT
ACAGTTTAAAAACCTGGCAACCACAATGGCAGATTGATCAATTATATATTGGTGATTATGTTTGTATTGCTGCTGAAGTG
ATAATCCTGTTAGGTGGAAACCATAATCACCGAGCGGACTGGTTTTGTTTGTATCCATTTGCAGATAAATATGTAGAGGC
TTATCAAGGCAAAGGCGATACTATTATTAAGGATGGTGTCTGGCTTGGCATGCGTGCTGTTATTATGCCAGGCGTTACTA
TTGGCGAAGGAGCAATAGTGGCTGCAAGCAGTATTGTAACCAAAGATGTGGAGCCCTACAGCATTGTTGCTGGAAATCCT
GCGAAACCAGTCAAAAAAAGATTTGCAGAAAACGTGATTGAACGAATTCTGGCTTTAGATATTTATTCCTGGAGCGAAGC
CAAATTTAACTTATTAAAAGACTATATTTGCAGCAATAACATAGATAAATTAGAGCAGGCCAGCAGGAGCTATGATCAAA
ACCATACCATAGAAAGCAAATGA

Upstream 100 bases:

>100_bases
ATCTTATTGATTGCATAGAGCCCACACATAATGAAACATTAGAAAGTTATGATCATAATAATATACAATGAGATCATTTA
AATTCCTAAATGAGCAAGGC

Downstream 100 bases:

>100_bases
TAAATATCAGGAAATTAAGATTAAGTGATGAATCCACCTTGGAAACTTTTTTAAAATCTCATGCTGATGAGAGTATGTTT
TTACGCAGCAATCTCTATCA

Product: chloramphenicol acetyltransferase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 220; Mature: 220

Protein sequence:

>220_residues
MKPTDKKHWSKIEYLHQSIKNPNIHIKGKHSYYSDAWTGSFEETVVRYLYGDEYSLKTWQPQWQIDQLYIGDYVCIAAEV
IILLGGNHNHRADWFCLYPFADKYVEAYQGKGDTIIKDGVWLGMRAVIMPGVTIGEGAIVAASSIVTKDVEPYSIVAGNP
AKPVKKRFAENVIERILALDIYSWSEAKFNLLKDYICSNNIDKLEQASRSYDQNHTIESK

Sequences:

>Translated_220_residues
MKPTDKKHWSKIEYLHQSIKNPNIHIKGKHSYYSDAWTGSFEETVVRYLYGDEYSLKTWQPQWQIDQLYIGDYVCIAAEV
IILLGGNHNHRADWFCLYPFADKYVEAYQGKGDTIIKDGVWLGMRAVIMPGVTIGEGAIVAASSIVTKDVEPYSIVAGNP
AKPVKKRFAENVIERILALDIYSWSEAKFNLLKDYICSNNIDKLEQASRSYDQNHTIESK
>Mature_220_residues
MKPTDKKHWSKIEYLHQSIKNPNIHIKGKHSYYSDAWTGSFEETVVRYLYGDEYSLKTWQPQWQIDQLYIGDYVCIAAEV
IILLGGNHNHRADWFCLYPFADKYVEAYQGKGDTIIKDGVWLGMRAVIMPGVTIGEGAIVAASSIVTKDVEPYSIVAGNP
AKPVKKRFAENVIERILALDIYSWSEAKFNLLKDYICSNNIDKLEQASRSYDQNHTIESK

Specific function: This enzyme is an effector of chloramphenicol resistance in bacteria [H]

COG id: COG0110

COG function: function code R; Acetyltransferase (isoleucine patch superfamily)

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the transferase hexapeptide repeat family [H]

Homologues:

Organism=Escherichia coli, GI1786664, Length=51, Percent_Identity=54.9019607843137, Blast_Score=61, Evalue=5e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR018357
- InterPro:   IPR011004 [H]

Pfam domain/function: NA

EC number: =2.3.1.28 [H]

Molecular weight: Translated: 25173; Mature: 25173

Theoretical pI: Translated: 6.88; Mature: 6.88

Prosite motif: PS00101 HEXAPEP_TRANSFERASES

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKPTDKKHWSKIEYLHQSIKNPNIHIKGKHSYYSDAWTGSFEETVVRYLYGDEYSLKTWQ
CCCCCHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCC
PQWQIDQLYIGDYVCIAAEVIILLGGNHNHRADWFCLYPFADKYVEAYQGKGDTIIKDGV
CCCCCCEEEECCHHHHHHHEEEEECCCCCCCCCEEEECCCHHHHHHHHCCCCCEEEECCH
WLGMRAVIMPGVTIGEGAIVAASSIVTKDVEPYSIVAGNPAKPVKKRFAENVIERILALD
HHHHHHHHHCCCEECCCCEEEHHHHHHCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHH
IYSWSEAKFNLLKDYICSNNIDKLEQASRSYDQNHTIESK
CCCCCHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCCCC
>Mature Secondary Structure
MKPTDKKHWSKIEYLHQSIKNPNIHIKGKHSYYSDAWTGSFEETVVRYLYGDEYSLKTWQ
CCCCCHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCC
PQWQIDQLYIGDYVCIAAEVIILLGGNHNHRADWFCLYPFADKYVEAYQGKGDTIIKDGV
CCCCCCEEEECCHHHHHHHEEEEECCCCCCCCCEEEECCCHHHHHHHHCCCCCEEEECCH
WLGMRAVIMPGVTIGEGAIVAASSIVTKDVEPYSIVAGNPAKPVKKRFAENVIERILALD
HHHHHHHHHCCCEECCCCEEEHHHHHHCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHH
IYSWSEAKFNLLKDYICSNNIDKLEQASRSYDQNHTIESK
CCCCCHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7793874 [H]