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The map label for this gene is tcaA [H]

Identifier: 148268793

GI number: 148268793

Start: 2512843

End: 2514225

Strand: Reverse

Name: tcaA [H]

Synonym: SaurJH9_2380

Alternate gene names: 148268793

Gene position: 2514225-2512843 (Counterclockwise)

Preceding gene: 148268794

Following gene: 148268792

Centisome position: 86.5

GC content: 31.67

Gene sequence:

>1383_bases
ATGAAATCTTGCCCGAAGTGCGGACAACAAGCACAAGATGATGTACAGATATGTACACAATGTGGACATAAATTTGATAG
TCGTCAAGCATTATATAGAAAGTCAACCGATGAAGATATACAAACTAATAACATCAAGATGAGAAAAATGGTGCCTTGGG
CAATTGTTTTTTTCATTTTAATCTTAATTATTATATTGTTCTTTTTACTAAGAAACTTCAATTCACCTGAAGCGCAAACT
AAAATATTAGTGAATGCGATTGAGAATAATGATAAACAAAAAGTAGCAACATTATTAAGTACTAAAGATAATAAAGTAGA
TTCTGAAGAAGCGAAAGTATACATTAACTATATCAAAGATGAAGTTGGGCTTAAGCAATTTGTCAGCGACCTTAAAAATA
CGGTACATAAATTGAATAAGAGTAAGACCAGCGTAGCTTCTTATATTCAAACCAGATCTGGTCAAAATATATTACGTGTA
AGTAAAAATGGCACGCGTTATATCTTTTTCGATAATATGAGCTTTACTGCACCTACCAAGCAACCAATTGTTAAGCCGAA
AGAAAAAACAAAATATGAGTTTAAATCTGGTGGTAAGAAAAAGATGGTTATAGCTGAAGCAAATAAAGTGACGCCAATAG
GTAATTTTATACCGGGGACATATAGAATTCCAGCTATGAAATCAACTGAGAACGGTGATTTTGCAGGCTATTTAAAATTT
GATTTTAGACAAAGTAATTCTGAAACGGTAGATGTTACTGAAGATTTTGAAGAAGCAAATATAACTGTAACTTTAAAAGG
CGATACAAAATTAAATGATAGTTCTAAAAAAGTAACTATAAATGACCGTGAAATGGCATTTTCAAGTTCCAAAACGTATG
GTCCATATCCACAAAATAAAGATATTACCATTTCAGCTTCAGGTAAAGCGAAAGGTAAAACATTTACAACACAGACGAAG
ACGATTAAAGCCAGCGATTTAAAATACAATACAGAGATAACTTTGAATTTTGACAGTGAAGATATCGAAGACTATGTTGA
AAAGAAAGAAAAAGAAGAAAACAGCTTGAAGAACAAATTGATAGAATTCTTTGCTGGATATTCTTTAGCGAATAATGCTG
CGTTTAATCAGTCAGATTTTGATTTTGTATCGTCATATATAAAAAAAGGATCATCTTTTTATGATGATGTAAAGAAGCGT
GTATCTAAAGGAAGTTTAATGATGATTAGTTCACCACAAATTATAGATGCTGAAAAACATGGTGATAAGATTACCGCAAC
CGTAAGATTAATAAATGAAAACGGTAAGCAAGTAGATAAAGAATATGAGCTTGAACAAGGCTCGCAAGACCGCTTGCAAT
TAATCAAGACATCAGAAAAATAG

Upstream 100 bases:

>100_bases
GTATTCTTGGGATAATATTTGTAAAATAATGGTAAAATAATGAAATAATTTTTGTGATATACATATAACAATTGAAGAGG
AACAGAATTGAGGTGAAAGT

Downstream 100 bases:

>100_bases
AGTATAAAACTTAAATAAGATGCATGTGTCATGGAATACAAACAACATCCTTTCAAAGTATTTACAATTAGTGTGAATTA
CTTTGAAGGGATTGTTTTTT

Product: membrane protein-like protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 460; Mature: 460

Protein sequence:

>460_residues
MKSCPKCGQQAQDDVQICTQCGHKFDSRQALYRKSTDEDIQTNNIKMRKMVPWAIVFFILILIIILFFLLRNFNSPEAQT
KILVNAIENNDKQKVATLLSTKDNKVDSEEAKVYINYIKDEVGLKQFVSDLKNTVHKLNKSKTSVASYIQTRSGQNILRV
SKNGTRYIFFDNMSFTAPTKQPIVKPKEKTKYEFKSGGKKKMVIAEANKVTPIGNFIPGTYRIPAMKSTENGDFAGYLKF
DFRQSNSETVDVTEDFEEANITVTLKGDTKLNDSSKKVTINDREMAFSSSKTYGPYPQNKDITISASGKAKGKTFTTQTK
TIKASDLKYNTEITLNFDSEDIEDYVEKKEKEENSLKNKLIEFFAGYSLANNAAFNQSDFDFVSSYIKKGSSFYDDVKKR
VSKGSLMMISSPQIIDAEKHGDKITATVRLINENGKQVDKEYELEQGSQDRLQLIKTSEK

Sequences:

>Translated_460_residues
MKSCPKCGQQAQDDVQICTQCGHKFDSRQALYRKSTDEDIQTNNIKMRKMVPWAIVFFILILIIILFFLLRNFNSPEAQT
KILVNAIENNDKQKVATLLSTKDNKVDSEEAKVYINYIKDEVGLKQFVSDLKNTVHKLNKSKTSVASYIQTRSGQNILRV
SKNGTRYIFFDNMSFTAPTKQPIVKPKEKTKYEFKSGGKKKMVIAEANKVTPIGNFIPGTYRIPAMKSTENGDFAGYLKF
DFRQSNSETVDVTEDFEEANITVTLKGDTKLNDSSKKVTINDREMAFSSSKTYGPYPQNKDITISASGKAKGKTFTTQTK
TIKASDLKYNTEITLNFDSEDIEDYVEKKEKEENSLKNKLIEFFAGYSLANNAAFNQSDFDFVSSYIKKGSSFYDDVKKR
VSKGSLMMISSPQIIDAEKHGDKITATVRLINENGKQVDKEYELEQGSQDRLQLIKTSEK
>Mature_460_residues
MKSCPKCGQQAQDDVQICTQCGHKFDSRQALYRKSTDEDIQTNNIKMRKMVPWAIVFFILILIIILFFLLRNFNSPEAQT
KILVNAIENNDKQKVATLLSTKDNKVDSEEAKVYINYIKDEVGLKQFVSDLKNTVHKLNKSKTSVASYIQTRSGQNILRV
SKNGTRYIFFDNMSFTAPTKQPIVKPKEKTKYEFKSGGKKKMVIAEANKVTPIGNFIPGTYRIPAMKSTENGDFAGYLKF
DFRQSNSETVDVTEDFEEANITVTLKGDTKLNDSSKKVTINDREMAFSSSKTYGPYPQNKDITISASGKAKGKTFTTQTK
TIKASDLKYNTEITLNFDSEDIEDYVEKKEKEENSLKNKLIEFFAGYSLANNAAFNQSDFDFVSSYIKKGSSFYDDVKKR
VSKGSLMMISSPQIIDAEKHGDKITATVRLINENGKQVDKEYELEQGSQDRLQLIKTSEK

Specific function: Unknown

COG id: COG4640

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cell membrane; Single-pass membrane protein [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the tcaA family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 52158; Mature: 52158

Theoretical pI: Translated: 9.60; Mature: 9.60

Prosite motif: PS01300 RECR

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKSCPKCGQQAQDDVQICTQCGHKFDSRQALYRKSTDEDIQTNNIKMRKMVPWAIVFFIL
CCCCCCCCCCCHHHHHHHHHHCCCCCCHHHHHHCCCCCCCCCCCEEEEHHHHHHHHHHHH
ILIIILFFLLRNFNSPEAQTKILVNAIENNDKQKVATLLSTKDNKVDSEEAKVYINYIKD
HHHHHHHHHHHCCCCCCHHHEEEEEECCCCCHHHHHHHHHCCCCCCCCHHHEEEEEHHHH
EVGLKQFVSDLKNTVHKLNKSKTSVASYIQTRSGQNILRVSKNGTRYIFFDNMSFTAPTK
HHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCEEEEECCCCEEEEECCCEECCCCC
QPIVKPKEKTKYEFKSGGKKKMVIAEANKVTPIGNFIPGTYRIPAMKSTENGDFAGYLKF
CCCCCCCHHCCHHHHCCCCEEEEEEECCCCCCCCCCCCCCEECCCCCCCCCCCEEEEEEE
DFRQSNSETVDVTEDFEEANITVTLKGDTKLNDSSKKVTINDREMAFSSSKTYGPYPQNK
EEECCCCCEEEECCCCCCCCEEEEEECCCCCCCCCCEEEECHHHHEECCCCCCCCCCCCC
DITISASGKAKGKTFTTQTKTIKASDLKYNTEITLNFDSEDIEDYVEKKEKEENSLKNKL
CEEEEECCCCCCCEEEEECCEEEECCEEECEEEEEEECHHHHHHHHHHHHHHHHHHHHHH
IEFFAGYSLANNAAFNQSDFDFVSSYIKKGSSFYDDVKKRVSKGSLMMISSPQIIDAEKH
HHHHHCCCCCCCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHCCCCEEEEECCCEEEHHHC
GDKITATVRLINENGKQVDKEYELEQGSQDRLQLIKTSEK
CCEEEEEEEEECCCCCCCCHHHHCCCCCHHHHHHHHCCCC
>Mature Secondary Structure
MKSCPKCGQQAQDDVQICTQCGHKFDSRQALYRKSTDEDIQTNNIKMRKMVPWAIVFFIL
CCCCCCCCCCCHHHHHHHHHHCCCCCCHHHHHHCCCCCCCCCCCEEEEHHHHHHHHHHHH
ILIIILFFLLRNFNSPEAQTKILVNAIENNDKQKVATLLSTKDNKVDSEEAKVYINYIKD
HHHHHHHHHHHCCCCCCHHHEEEEEECCCCCHHHHHHHHHCCCCCCCCHHHEEEEEHHHH
EVGLKQFVSDLKNTVHKLNKSKTSVASYIQTRSGQNILRVSKNGTRYIFFDNMSFTAPTK
HHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCEEEEECCCCEEEEECCCEECCCCC
QPIVKPKEKTKYEFKSGGKKKMVIAEANKVTPIGNFIPGTYRIPAMKSTENGDFAGYLKF
CCCCCCCHHCCHHHHCCCCEEEEEEECCCCCCCCCCCCCCEECCCCCCCCCCCEEEEEEE
DFRQSNSETVDVTEDFEEANITVTLKGDTKLNDSSKKVTINDREMAFSSSKTYGPYPQNK
EEECCCCCEEEECCCCCCCCEEEEEECCCCCCCCCCEEEECHHHHEECCCCCCCCCCCCC
DITISASGKAKGKTFTTQTKTIKASDLKYNTEITLNFDSEDIEDYVEKKEKEENSLKNKL
CEEEEECCCCCCCEEEEECCEEEECCEEECEEEEEEECHHHHHHHHHHHHHHHHHHHHHH
IEFFAGYSLANNAAFNQSDFDFVSSYIKKGSSFYDDVKKRVSKGSLMMISSPQIIDAEKH
HHHHHCCCCCCCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHCCCCEEEEECCCEEEHHHC
GDKITATVRLINENGKQVDKEYELEQGSQDRLQLIKTSEK
CCEEEEEEEEECCCCCCCCHHHHCCCCCHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: NA