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The map label for this gene is sepA [H]

Identifier: 148268613

GI number: 148268613

Start: 2339043

End: 2339510

Strand: Reverse

Name: sepA [H]

Synonym: SaurJH9_2199

Alternate gene names: 148268613

Gene position: 2339510-2339043 (Counterclockwise)

Preceding gene: 148268614

Following gene: 148268612

Centisome position: 80.49

GC content: 26.71

Gene sequence:

>468_bases
GTGAATTATCTTAAACATAAGTTTTATAACTTGTTAACTACAATGATTGTTCTCTTTATTTTTGTACTTTCTGGTGCGAT
TTTTTTAACATTTCTAGGGTTTGGTTTATATGGATTAAGTAGAATACTTATTTATTTTAGGTTGGGTGACTTTACATATA
ATAGAAGTATGTACGATAACCTATTATATTATGGCAGTTATATAATCTTTGGGTACTTCATCATATTTGCAGTCGAGCAT
TTAATGGATTATTTTAGAAAAATGTTGCCTGAAAATGCATATTTTAGAGGCGCGACTTTTCATTTGATTTCTTACACAGT
TGCAACAACGTTATTTTATTTCATCATTCATTTAAATTATGTTTATATCAATATCGATTTTTGGGTCATCATGGTTATTA
TAGGGTTCTTATATGTTTGTAAGCTTCAATTTTACCCTGAAAGTAAAAATTTAAATAATAGAAAATAG

Upstream 100 bases:

>100_bases
ATGATTAAAATTGATGTAGTGTAATTAAAGTAAGAAATAATAAATTTCCTAGATACTAGATAAATCGTTCAATATTTTAT
TAATAAGGAGGCCAATGATT

Downstream 100 bases:

>100_bases
ATATCTGAAGTTGAGGGCACATATGTGTTCCAACTTCTTTTTGTTCAATAGAAGAATCGATAATAGTGAGTCTTAGTGCT
CAATTTGTGGTAAATAAGTT

Product: hypothetical protein

Products: NA

Alternate protein names: Antiseptic resistance protein sepA; Staphylococcal efflux pump A [H]

Number of amino acids: Translated: 155; Mature: 155

Protein sequence:

>155_residues
MNYLKHKFYNLLTTMIVLFIFVLSGAIFLTFLGFGLYGLSRILIYFRLGDFTYNRSMYDNLLYYGSYIIFGYFIIFAVEH
LMDYFRKMLPENAYFRGATFHLISYTVATTLFYFIIHLNYVYINIDFWVIMVIIGFLYVCKLQFYPESKNLNNRK

Sequences:

>Translated_155_residues
MNYLKHKFYNLLTTMIVLFIFVLSGAIFLTFLGFGLYGLSRILIYFRLGDFTYNRSMYDNLLYYGSYIIFGYFIIFAVEH
LMDYFRKMLPENAYFRGATFHLISYTVATTLFYFIIHLNYVYINIDFWVIMVIIGFLYVCKLQFYPESKNLNNRK
>Mature_155_residues
MNYLKHKFYNLLTTMIVLFIFVLSGAIFLTFLGFGLYGLSRILIYFRLGDFTYNRSMYDNLLYYGSYIIFGYFIIFAVEH
LMDYFRKMLPENAYFRGATFHLISYTVATTLFYFIIHLNYVYINIDFWVIMVIIGFLYVCKLQFYPESKNLNNRK

Specific function: Involved in multidrug efflux [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the multidrug resistance efflux pump sepA family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 18687; Mature: 18687

Theoretical pI: Translated: 9.40; Mature: 9.40

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
3.9 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
3.9 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNYLKHKFYNLLTTMIVLFIFVLSGAIFLTFLGFGLYGLSRILIYFRLGDFTYNRSMYDN
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHH
LLYYGSYIIFGYFIIFAVEHLMDYFRKMLPENAYFRGATFHLISYTVATTLFYFIIHLNY
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH
VYINIDFWVIMVIIGFLYVCKLQFYPESKNLNNRK
HEEEHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC
>Mature Secondary Structure
MNYLKHKFYNLLTTMIVLFIFVLSGAIFLTFLGFGLYGLSRILIYFRLGDFTYNRSMYDN
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHH
LLYYGSYIIFGYFIIFAVEHLMDYFRKMLPENAYFRGATFHLISYTVATTLFYFIIHLNY
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH
VYINIDFWVIMVIIGFLYVCKLQFYPESKNLNNRK
HEEEHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA