Click here to switch to the map view.

The map label for this gene is 148268452

Identifier: 148268452

GI number: 148268452

Start: 2157195

End: 2157566

Strand: Reverse

Name: 148268452

Synonym: SaurJH9_2035

Alternate gene names: NA

Gene position: 2157566-2157195 (Counterclockwise)

Preceding gene: 148268453

Following gene: 148268451

Centisome position: 74.23

GC content: 37.9

Gene sequence:

>372_bases
ATGGCGAGAAAAGCAAGGATTGTAACAATAAATGATAAACCTTATAGGTTCAGTAAATTTGAAATGGAATTAATAGAAAG
TCACGGTATAACCGCTGGAATGGTTTCTAAGAGAATAAAAGACGGTTGGGAACTACATGAAGCAATGGACGCACCAGAAG
GTACGCGTTTAAGCGAGTACAGAGAAAAGAAAACAATAGAAAGACTGGAACAAGCTAGACTCGAACGCAAATTGGAAAGA
AAGCGAAAGAGAGAGGCTGAGCTAAGAAGAAAGAAGCCACACTTGTTTAATGTACCTCAGAAACATTCACGTGATCCGTA
CTGGTTTGATAATACTTATAACCAAATGTTCAAGAAATGGAGTGAAGCATAA

Upstream 100 bases:

>100_bases
GAAAGACGATAACCAAATTACAGAAATAACTAGCTCAAAGCGTTATGGAATTGAGCCCAAAATAATCATACGAATAGAAG
AAATATAAGAGGTGGATAAA

Downstream 100 bases:

>100_bases
TGAGTGTAATCAGTAACAGAAAAGTAGATATGAATGAAATACAAGACAATGTTAAGCAACCAGCGCACTACACATACGGC
GACATTGAAATTATAGATTT

Product: PVL ORF-50 family protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 123; Mature: 122

Protein sequence:

>123_residues
MARKARIVTINDKPYRFSKFEMELIESHGITAGMVSKRIKDGWELHEAMDAPEGTRLSEYREKKTIERLEQARLERKLER
KRKREAELRRKKPHLFNVPQKHSRDPYWFDNTYNQMFKKWSEA

Sequences:

>Translated_123_residues
MARKARIVTINDKPYRFSKFEMELIESHGITAGMVSKRIKDGWELHEAMDAPEGTRLSEYREKKTIERLEQARLERKLER
KRKREAELRRKKPHLFNVPQKHSRDPYWFDNTYNQMFKKWSEA
>Mature_122_residues
ARKARIVTINDKPYRFSKFEMELIESHGITAGMVSKRIKDGWELHEAMDAPEGTRLSEYREKKTIERLEQARLERKLERK
RKREAELRRKKPHLFNVPQKHSRDPYWFDNTYNQMFKKWSEA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 14980; Mature: 14849

Theoretical pI: Translated: 10.60; Mature: 10.60

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.1 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MARKARIVTINDKPYRFSKFEMELIESHGITAGMVSKRIKDGWELHEAMDAPEGTRLSEY
CCCCCEEEEECCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHH
REKKTIERLEQARLERKLERKRKREAELRRKKPHLFNVPQKHSRDPYWFDNTYNQMFKKW
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHH
SEA
HCC
>Mature Secondary Structure 
ARKARIVTINDKPYRFSKFEMELIESHGITAGMVSKRIKDGWELHEAMDAPEGTRLSEY
CCCCEEEEECCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHH
REKKTIERLEQARLERKLERKRKREAELRRKKPHLFNVPQKHSRDPYWFDNTYNQMFKKW
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHH
SEA
HCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA