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The map label for this gene is entD [H]

Identifier: 148268301

GI number: 148268301

Start: 2003098

End: 2003862

Strand: Reverse

Name: entD [H]

Synonym: SaurJH9_1883

Alternate gene names: 148268301

Gene position: 2003862-2003098 (Counterclockwise)

Preceding gene: 148268302

Following gene: 148268300

Centisome position: 68.94

GC content: 25.75

Gene sequence:

>765_bases
ATGTTAAATGTATTATTATTAATTTTAAATTTAATTGCAATATGTAGTGTAAACAATGCATATGCAAATGAAGAAGATCC
TAAAATAGAGAGTTTGTGTAAGAAGTCAAGTGTAGACCCTATTGCTTTACATAATATTAATGATGATTATATAAATAATC
GATTTACGACAGTAAAATCAATTGTATCAACTACAGAAAAATTCTTAGACTTCGATTTATTATTTAAAAGTATTAATTGG
TTAGATGGAATATCTGCTGAATTTAAAGATTTAAAAGTGGAATTTAGCTCATCAGCGATTTCTAAAGAATTTCTAGGAAA
GACTGTTGATATTTATGGTGTTTACTATAAAGCACATTGTCATGGTGAGCATCAAGTGGATACTGCCTGTACATATGGTG
GGGTAACACCTCATGAAAATAATAAATTAAGCGAGCCTAAAAATATAGGAGTAGCTGTGTATAAGGATAATGTAAATGTT
AATACATTTATCGTTACTACAGATAAAAAGAAAGTTACTGCACAAGAACTTGATATTAAAGTAAGAACAAAATTAAATAA
TGCATATAAATTGTATGACAGAATGACTAGTGATGTACAAAAAGGTTATATTAAATTTCATTCTCATTCGGAGCATAAAG
AATCATTTTATTATGATTTATTTTATATTAAAGGAAATTTACCAGATCAATATTTGCAAATTTATAATGATAATAAAACA
ATAGATTCATCAGACTATCATATTGATGTTTATTTATTTACATAA

Upstream 100 bases:

>100_bases
TAATAATATTAGTGAATATTTAAAGATTAAAAACAGAATTTTTCAGTTTATTAAGAAAAAAATTTTGTGAAGGAGGGATA
TTATTAAAAATAGTAAAGTA

Downstream 100 bases:

>100_bases
CAATCTGAAAGTTGATGGATATCAACTTACAATCCTATAAAGAACTATAGATATTAACATATTTTTACAAAGTAGCTTAG
TAAATGATGAAGAACGAATA

Product: toxin OB-fold domain-containing protein

Products: NA

Alternate protein names: SED [H]

Number of amino acids: Translated: 254; Mature: 254

Protein sequence:

>254_residues
MLNVLLLILNLIAICSVNNAYANEEDPKIESLCKKSSVDPIALHNINDDYINNRFTTVKSIVSTTEKFLDFDLLFKSINW
LDGISAEFKDLKVEFSSSAISKEFLGKTVDIYGVYYKAHCHGEHQVDTACTYGGVTPHENNKLSEPKNIGVAVYKDNVNV
NTFIVTTDKKKVTAQELDIKVRTKLNNAYKLYDRMTSDVQKGYIKFHSHSEHKESFYYDLFYIKGNLPDQYLQIYNDNKT
IDSSDYHIDVYLFT

Sequences:

>Translated_254_residues
MLNVLLLILNLIAICSVNNAYANEEDPKIESLCKKSSVDPIALHNINDDYINNRFTTVKSIVSTTEKFLDFDLLFKSINW
LDGISAEFKDLKVEFSSSAISKEFLGKTVDIYGVYYKAHCHGEHQVDTACTYGGVTPHENNKLSEPKNIGVAVYKDNVNV
NTFIVTTDKKKVTAQELDIKVRTKLNNAYKLYDRMTSDVQKGYIKFHSHSEHKESFYYDLFYIKGNLPDQYLQIYNDNKT
IDSSDYHIDVYLFT
>Mature_254_residues
MLNVLLLILNLIAICSVNNAYANEEDPKIESLCKKSSVDPIALHNINDDYINNRFTTVKSIVSTTEKFLDFDLLFKSINW
LDGISAEFKDLKVEFSSSAISKEFLGKTVDIYGVYYKAHCHGEHQVDTACTYGGVTPHENNKLSEPKNIGVAVYKDNVNV
NTFIVTTDKKKVTAQELDIKVRTKLNNAYKLYDRMTSDVQKGYIKFHSHSEHKESFYYDLFYIKGNLPDQYLQIYNDNKT
IDSSDYHIDVYLFT

Specific function: Staphylococcal enterotoxins cause the intoxication staphylococcal food poisoning syndrome. The illness characterized by high fever, hypotension, diarrhea, shock, and in some cases death [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Secreted [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the staphylococcal/streptococcal toxin family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008992
- InterPro:   IPR006126
- InterPro:   IPR006173
- InterPro:   IPR016091
- InterPro:   IPR013307
- InterPro:   IPR006123
- InterPro:   IPR006177 [H]

Pfam domain/function: PF02876 Stap_Strp_tox_C; PF01123 Stap_Strp_toxin [H]

EC number: NA

Molecular weight: Translated: 29148; Mature: 29148

Theoretical pI: Translated: 6.23; Mature: 6.23

Prosite motif: PS00277 STAPH_STREP_TOXIN_1 ; PS00278 STAPH_STREP_TOXIN_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
0.8 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLNVLLLILNLIAICSVNNAYANEEDPKIESLCKKSSVDPIALHNINDDYINNRFTTVKS
CHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHCCCCCEEEECCCHHHHCCHHHHHHH
IVSTTEKFLDFDLLFKSINWLDGISAEFKDLKVEFSSSAISKEFLGKTVDIYGVYYKAHC
HHHHHHHHHHHHHHHHHHHHHCCCCCCHHHEEEEECCHHHHHHHHCCEEEEEEEEEEEEE
HGEHQVDTACTYGGVTPHENNKLSEPKNIGVAVYKDNVNVNTFIVTTDKKKVTAQELDIK
CCCCCCCCEEECCCCCCCCCCCCCCCCCCEEEEEECCCCEEEEEEECCCCEEEHHHCCEE
VRTKLNNAYKLYDRMTSDVQKGYIKFHSHSEHKESFYYDLFYIKGNLPDQYLQIYNDNKT
EEECCCHHHHHHHHHHHHHHHCEEEECCCCCCCCCEEEEEEEEECCCCHHHHEEECCCCC
IDSSDYHIDVYLFT
CCCCCCEEEEEEEC
>Mature Secondary Structure
MLNVLLLILNLIAICSVNNAYANEEDPKIESLCKKSSVDPIALHNINDDYINNRFTTVKS
CHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHCCCCCEEEECCCHHHHCCHHHHHHH
IVSTTEKFLDFDLLFKSINWLDGISAEFKDLKVEFSSSAISKEFLGKTVDIYGVYYKAHC
HHHHHHHHHHHHHHHHHHHHHCCCCCCHHHEEEEECCHHHHHHHHCCEEEEEEEEEEEEE
HGEHQVDTACTYGGVTPHENNKLSEPKNIGVAVYKDNVNVNTFIVTTDKKKVTAQELDIK
CCCCCCCCEEECCCCCCCCCCCCCCCCCCEEEEEECCCCEEEEEEECCCCEEEHHHCCEE
VRTKLNNAYKLYDRMTSDVQKGYIKFHSHSEHKESFYYDLFYIKGNLPDQYLQIYNDNKT
EEECCCHHHHHHHHHHHHHHHCEEEECCCCCCCCCEEEEEEEEECCCCHHHHEEECCCCC
IDSSDYHIDVYLFT
CCCCCCEEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 2549000; 9003758 [H]