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The map label for this gene is 148268043

Identifier: 148268043

GI number: 148268043

Start: 1718250

End: 1719350

Strand: Reverse

Name: 148268043

Synonym: SaurJH9_1617

Alternate gene names: NA

Gene position: 1719350-1718250 (Counterclockwise)

Preceding gene: 148268044

Following gene: 148268042

Centisome position: 59.15

GC content: 31.06

Gene sequence:

>1101_bases
ATGAAAATAGCTGATTTAATGACATTGTTAGATCATCATGTGCCATTTAGTACTGCTGAATCTTGGGATAATGTAGGATT
GTTAATAGGTGATGGAGATGTTGAAGTTACTGGTGTTTTAACAGCATTAGACTGTACGTTGGAAGTAGTAAATGAAGCAA
TCGAAAAAGGTTATAATACTATTATTAGTCATCATCCTCTAATCTTTAAAGGCGTAACATCATTAAAAGCTAATGGTTAT
GGTTTGATCATTAGAAAACTAATTCAACATGACATTAATTTAATAGCGATGCATACAAATTTAGATGTAAATCCGTATGG
TGTCAATATGATGTTGGCGAAGGCGATGGGTTTGAAGAACATTTCAATAATAAATAATCAACAAGATGTATACTATAAAG
TTCAAACATATATACCTAAGGATAATGTTGGACCATTTAAAGATAAGCTTAGTGAAAATGGATTAGCGCAAGAAGGTAAT
TATGAATATTGTTTCTTTGAAAGTGAAGGAAGAGGGCAATTCAAACCAGTTGGTGAAGCTAATCCAACAATAGGACAAAT
TGATAAAATTGAAGATGTAGATGAAGTTAAAATTGAATTTATGATAGATGCATATCAAAAGTCAAGGGCTGAGCAATTAA
TTAAACAATACCATCCATATGAAACACCGGTATTTGATTTTATTGAGATAAAACAAACATCCCTTTATGGACTTGGCGTT
ATGGCAGAAGTGGATAATCAAATGACATTGGAAGATTTCGCAGCTGATATTAAATCTAAATTAAATATCCCAAGTGTCCG
TTTTGTTGGTGAGTCTAATCAGAAAATTAAACGTATTGCAATTATTGGTGGTTCAGGTATTGGATATGAATATCAAGCTG
TCCAACAAGGCGCAGATGTCTTTGTTACAGGTGATATTAAACATCATGATGCCTTAGATGCTAAAATTCATGGTGTGAAT
TTAATTGATATTAATCATTACAGCGAATATGTGATGAAAGAAGGTTTAAAAACGTTACTAATGAATTGGTTCAATATAGA
AAAAATAAATATAGATGTTGAAGCATCTACAATTAATACAGATCCATTTCAATATATTTAA

Upstream 100 bases:

>100_bases
CACTTTATCATATTAAATCGAAACTCAATACTGAACAACATCATCAACGTTTAGCTCAAATTAATGACGAAATTGCTGTA
ATTGAAAGAGTGTTATAGTA

Downstream 100 bases:

>100_bases
ACTAAAATCTCGGGATTTCTAAATTTTGAAATTTCGAGGTTTTAATATTTTTATTTAAAATAGCACATTTATACTTTATA
ATAGTAAAGATGAACATATA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 366; Mature: 366

Protein sequence:

>366_residues
MKIADLMTLLDHHVPFSTAESWDNVGLLIGDGDVEVTGVLTALDCTLEVVNEAIEKGYNTIISHHPLIFKGVTSLKANGY
GLIIRKLIQHDINLIAMHTNLDVNPYGVNMMLAKAMGLKNISIINNQQDVYYKVQTYIPKDNVGPFKDKLSENGLAQEGN
YEYCFFESEGRGQFKPVGEANPTIGQIDKIEDVDEVKIEFMIDAYQKSRAEQLIKQYHPYETPVFDFIEIKQTSLYGLGV
MAEVDNQMTLEDFAADIKSKLNIPSVRFVGESNQKIKRIAIIGGSGIGYEYQAVQQGADVFVTGDIKHHDALDAKIHGVN
LIDINHYSEYVMKEGLKTLLMNWFNIEKINIDVEASTINTDPFQYI

Sequences:

>Translated_366_residues
MKIADLMTLLDHHVPFSTAESWDNVGLLIGDGDVEVTGVLTALDCTLEVVNEAIEKGYNTIISHHPLIFKGVTSLKANGY
GLIIRKLIQHDINLIAMHTNLDVNPYGVNMMLAKAMGLKNISIINNQQDVYYKVQTYIPKDNVGPFKDKLSENGLAQEGN
YEYCFFESEGRGQFKPVGEANPTIGQIDKIEDVDEVKIEFMIDAYQKSRAEQLIKQYHPYETPVFDFIEIKQTSLYGLGV
MAEVDNQMTLEDFAADIKSKLNIPSVRFVGESNQKIKRIAIIGGSGIGYEYQAVQQGADVFVTGDIKHHDALDAKIHGVN
LIDINHYSEYVMKEGLKTLLMNWFNIEKINIDVEASTINTDPFQYI
>Mature_366_residues
MKIADLMTLLDHHVPFSTAESWDNVGLLIGDGDVEVTGVLTALDCTLEVVNEAIEKGYNTIISHHPLIFKGVTSLKANGY
GLIIRKLIQHDINLIAMHTNLDVNPYGVNMMLAKAMGLKNISIINNQQDVYYKVQTYIPKDNVGPFKDKLSENGLAQEGN
YEYCFFESEGRGQFKPVGEANPTIGQIDKIEDVDEVKIEFMIDAYQKSRAEQLIKQYHPYETPVFDFIEIKQTSLYGLGV
MAEVDNQMTLEDFAADIKSKLNIPSVRFVGESNQKIKRIAIIGGSGIGYEYQAVQQGADVFVTGDIKHHDALDAKIHGVN
LIDINHYSEYVMKEGLKTLLMNWFNIEKINIDVEASTINTDPFQYI

Specific function: Unknown

COG id: COG0327

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0135 (NIF3) family

Homologues:

Organism=Homo sapiens, GI215272360, Length=379, Percent_Identity=27.9683377308707, Blast_Score=97, Evalue=2e-20,
Organism=Homo sapiens, GI56605983, Length=379, Percent_Identity=27.9683377308707, Blast_Score=97, Evalue=2e-20,
Organism=Homo sapiens, GI209862879, Length=379, Percent_Identity=27.7044854881267, Blast_Score=97, Evalue=2e-20,
Organism=Homo sapiens, GI215272362, Length=120, Percent_Identity=35.8333333333333, Blast_Score=71, Evalue=1e-12,
Organism=Drosophila melanogaster, GI19921430, Length=122, Percent_Identity=37.7049180327869, Blast_Score=73, Evalue=4e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y1388_STAAN (P67273)

Other databases:

- EMBL:   BA000018
- PIR:   F89936
- RefSeq:   NP_374672.1
- PDB:   2NYD
- PDB:   3LNL
- PDBsum:   2NYD
- PDBsum:   3LNL
- ProteinModelPortal:   P67273
- SMR:   P67273
- STRING:   P67273
- EnsemblBacteria:   EBSTAT00000001970
- GeneID:   1124229
- GenomeReviews:   BA000018_GR
- KEGG:   sau:SA1388
- eggNOG:   COG0327
- GeneTree:   EBGT00050000025001
- HOGENOM:   HBG554751
- OMA:   KLVVFVP
- ProtClustDB:   CLSK885430
- BioCyc:   SAUR158879:SA1388-MONOMER
- InterPro:   IPR002678
- InterPro:   IPR017221
- PANTHER:   PTHR13799
- PIRSF:   PIRSF037489
- TIGRFAMs:   TIGR00486

Pfam domain/function: PF01784 NIF3; SSF102705 interacting_NIF3

EC number: NA

Molecular weight: Translated: 41075; Mature: 41075

Theoretical pI: Translated: 4.67; Mature: 4.67

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKIADLMTLLDHHVPFSTAESWDNVGLLIGDGDVEVTGVLTALDCTLEVVNEAIEKGYNT
CCHHHHHHHHHHCCCCCCCCCCCCEEEEEECCCEEEEEEEHHHHHHHHHHHHHHHHHHHH
IISHHPLIFKGVTSLKANGYGLIIRKLIQHDINLIAMHTNLDVNPYGVNMMLAKAMGLKN
HHCCCCEEEECHHHHCCCCHHHHHHHHHHCCCEEEEEEECCCCCCCCHHHHHHHHCCCCE
ISIINNQQDVYYKVQTYIPKDNVGPFKDKLSENGLAQEGNYEYCFFESEGRGQFKPVGEA
EEEECCCCCEEEEEEEECCCCCCCHHHHHHHCCCCCCCCCEEEEEEECCCCCCCCCCCCC
NPTIGQIDKIEDVDEVKIEFMIDAYQKSRAEQLIKQYHPYETPVFDFIEIKQTSLYGLGV
CCCCCCCCCCCCCCCEEEEEEEEHHHHHHHHHHHHHHCCCCCCCCHHEEEECCEEEEEEE
MAEVDNQMTLEDFAADIKSKLNIPSVRFVGESNQKIKRIAIIGGSGIGYEYQAVQQGADV
EEECCCCCCHHHHHHHHHHHCCCCEEEEECCCCCCEEEEEEECCCCCCCCHHHHHCCCCE
FVTGDIKHHDALDAKIHGVNLIDINHYSEYVMKEGLKTLLMNWFNIEKINIDVEASTINT
EEECCCCCCCCCCCEEECEEEEEECHHHHHHHHHHHHHHHHHHCCEEEEEEEEEEEEECC
DPFQYI
CCCCCC
>Mature Secondary Structure
MKIADLMTLLDHHVPFSTAESWDNVGLLIGDGDVEVTGVLTALDCTLEVVNEAIEKGYNT
CCHHHHHHHHHHCCCCCCCCCCCCEEEEEECCCEEEEEEEHHHHHHHHHHHHHHHHHHHH
IISHHPLIFKGVTSLKANGYGLIIRKLIQHDINLIAMHTNLDVNPYGVNMMLAKAMGLKN
HHCCCCEEEECHHHHCCCCHHHHHHHHHHCCCEEEEEEECCCCCCCCHHHHHHHHCCCCE
ISIINNQQDVYYKVQTYIPKDNVGPFKDKLSENGLAQEGNYEYCFFESEGRGQFKPVGEA
EEEECCCCCEEEEEEEECCCCCCCHHHHHHHCCCCCCCCCEEEEEEECCCCCCCCCCCCC
NPTIGQIDKIEDVDEVKIEFMIDAYQKSRAEQLIKQYHPYETPVFDFIEIKQTSLYGLGV
CCCCCCCCCCCCCCCEEEEEEEEHHHHHHHHHHHHHHCCCCCCCCHHEEEECCEEEEEEE
MAEVDNQMTLEDFAADIKSKLNIPSVRFVGESNQKIKRIAIIGGSGIGYEYQAVQQGADV
EEECCCCCCHHHHHHHHHHHCCCCEEEEECCCCCCEEEEEEECCCCCCCCHHHHHCCCCE
FVTGDIKHHDALDAKIHGVNLIDINHYSEYVMKEGLKTLLMNWFNIEKINIDVEASTINT
EEECCCCCCCCCCCEEECEEEEEECHHHHHHHHHHHHHHHHHHCCEEEEEEEEEEEEECC
DPFQYI
CCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 11418146