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The map label for this gene is argF [H]

Identifier: 148267660

GI number: 148267660

Start: 1270396

End: 1271397

Strand: Direct

Name: argF [H]

Synonym: SaurJH9_1227

Alternate gene names: 148267660

Gene position: 1270396-1271397 (Clockwise)

Preceding gene: 148267656

Following gene: 148267661

Centisome position: 43.71

GC content: 33.73

Gene sequence:

>1002_bases
ATGAAAAATTTACGAAACAGAAGTTTTTTAACTTTATTAGACTTTTCACGACAAGAGGTAGAATTCTTATTAACACTCTC
CGAGGATTTAAAACGTGCTAAATATATTGGCACTGAAAAGCCTATGTTAAAAAATAAAAATATTGCACTGTTATTTGAAA
AAGATTCTACAAGAACGCGATGTGCATTTGAAGTTGCAGCGCATGATCAAGGTGCAAATGTAACTTATTTAGGCCCAACT
GGATCACAAATGGGTAAAAAAGAAACAACTAAAGATACTGCACGTGTGCTTGGTGGAATGTATGATGGCATTGAATACCG
TGGTTTTTCACAAAGAACAGTAGAAACTTTAGCTGAAAATTCAGGCGTACCAGTGTGGAATGGTTTAACTGATGAAGATC
ATCCTACTCAAGTTCTTGCTGATTTCTTAACAGCAAAAGAAGTCTTAAAAAAAGATTATGCAGATATTAACTTTACATAT
GTTGGAGATGGTCGTAATAACGTTGCAAATGCATTAATGCAAGGTGCTGCCATTATGGGTATGAACTTCCATTTAGTTTG
TCCAAAAGAATTAAATCCAACAGATGAATTATTAAATCGCTGTAAAAATATTGCCGCTGAAAATGGTGGCAACATATTAA
TCACAGATGATATTGACCAAGGTGTAAAAGGTTCGGATGTAATTTACACTGATGTTTGGGTATCAATGGGTGAACCTGAT
GAAGTATGGAAAGAACGACTTGAATTATTGAAACCATATCAAGTAAATAAAGAAATGATGGATAAAACTGGTAATCCAAA
TGTTATTTTTGAGCATTGCTTACCATCTTTCCATAATGCTGATACGAAAATTGGTCAACAAATTTTTGAAAAATATGGTA
TTCGAGAAATGGAAGTTACAGATGAAGTATTCGAAAGTAAAGCTTCAGTTGTATTCCAAGAAGCTGAGAACAGAATGCAT
ACAATCAAAGCAGTCATGGTTGCTACATTGGGTGAATTTTAA

Upstream 100 bases:

>100_bases
TTAATTATTGATAAAATATTACAAATTTTAATAGTAGGTTGTGTTTATTTTGTATGCGCTTACAATTTAGGTGTAACTAA
AATAAAAGGAGTTGTTATTA

Downstream 100 bases:

>100_bases
ATGATATAAGGAAGTGAATATGATGGCGAAAATAGTAGTAGCATTAGGTGGTAATGCTTTAGGAAAATCACCTCAAGAAC
AACTCGAGCTTGTTAAAAAT

Product: ornithine carbamoyltransferase

Products: NA

Alternate protein names: OTCase [H]

Number of amino acids: Translated: 333; Mature: 333

Protein sequence:

>333_residues
MKNLRNRSFLTLLDFSRQEVEFLLTLSEDLKRAKYIGTEKPMLKNKNIALLFEKDSTRTRCAFEVAAHDQGANVTYLGPT
GSQMGKKETTKDTARVLGGMYDGIEYRGFSQRTVETLAENSGVPVWNGLTDEDHPTQVLADFLTAKEVLKKDYADINFTY
VGDGRNNVANALMQGAAIMGMNFHLVCPKELNPTDELLNRCKNIAAENGGNILITDDIDQGVKGSDVIYTDVWVSMGEPD
EVWKERLELLKPYQVNKEMMDKTGNPNVIFEHCLPSFHNADTKIGQQIFEKYGIREMEVTDEVFESKASVVFQEAENRMH
TIKAVMVATLGEF

Sequences:

>Translated_333_residues
MKNLRNRSFLTLLDFSRQEVEFLLTLSEDLKRAKYIGTEKPMLKNKNIALLFEKDSTRTRCAFEVAAHDQGANVTYLGPT
GSQMGKKETTKDTARVLGGMYDGIEYRGFSQRTVETLAENSGVPVWNGLTDEDHPTQVLADFLTAKEVLKKDYADINFTY
VGDGRNNVANALMQGAAIMGMNFHLVCPKELNPTDELLNRCKNIAAENGGNILITDDIDQGVKGSDVIYTDVWVSMGEPD
EVWKERLELLKPYQVNKEMMDKTGNPNVIFEHCLPSFHNADTKIGQQIFEKYGIREMEVTDEVFESKASVVFQEAENRMH
TIKAVMVATLGEF
>Mature_333_residues
MKNLRNRSFLTLLDFSRQEVEFLLTLSEDLKRAKYIGTEKPMLKNKNIALLFEKDSTRTRCAFEVAAHDQGANVTYLGPT
GSQMGKKETTKDTARVLGGMYDGIEYRGFSQRTVETLAENSGVPVWNGLTDEDHPTQVLADFLTAKEVLKKDYADINFTY
VGDGRNNVANALMQGAAIMGMNFHLVCPKELNPTDELLNRCKNIAAENGGNILITDDIDQGVKGSDVIYTDVWVSMGEPD
EVWKERLELLKPYQVNKEMMDKTGNPNVIFEHCLPSFHNADTKIGQQIFEKYGIREMEVTDEVFESKASVVFQEAENRMH
TIKAVMVATLGEF

Specific function: Arginine biosynthesis; sixth step. [C]

COG id: COG0078

COG function: function code E; Ornithine carbamoyltransferase

Gene ontology:

Cell location: Cytoplasm (Probable) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ATCase/OTCase family [H]

Homologues:

Organism=Homo sapiens, GI38788445, Length=332, Percent_Identity=36.7469879518072, Blast_Score=208, Evalue=7e-54,
Organism=Escherichia coli, GI1790703, Length=332, Percent_Identity=58.433734939759, Blast_Score=407, Evalue=1e-115,
Organism=Escherichia coli, GI1786469, Length=334, Percent_Identity=57.7844311377245, Blast_Score=400, Evalue=1e-113,
Organism=Escherichia coli, GI2367364, Length=335, Percent_Identity=26.2686567164179, Blast_Score=76, Evalue=3e-15,
Organism=Escherichia coli, GI48994908, Length=375, Percent_Identity=24, Blast_Score=72, Evalue=4e-14,
Organism=Saccharomyces cerevisiae, GI6322373, Length=329, Percent_Identity=28.8753799392097, Blast_Score=140, Evalue=4e-34,
Organism=Saccharomyces cerevisiae, GI6322331, Length=228, Percent_Identity=26.7543859649123, Blast_Score=76, Evalue=9e-15,
Organism=Drosophila melanogaster, GI24642586, Length=302, Percent_Identity=23.5099337748344, Blast_Score=66, Evalue=3e-11,

Paralogues:

None

Copy number: 140 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 2066 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006132
- InterPro:   IPR006130
- InterPro:   IPR006131
- InterPro:   IPR002292 [H]

Pfam domain/function: PF00185 OTCace; PF02729 OTCace_N [H]

EC number: =2.1.3.3 [H]

Molecular weight: Translated: 37486; Mature: 37486

Theoretical pI: Translated: 4.82; Mature: 4.82

Prosite motif: PS00097 CARBAMOYLTRANSFERASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
3.9 %Met     (Translated Protein)
5.1 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
3.9 %Met     (Mature Protein)
5.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKNLRNRSFLTLLDFSRQEVEFLLTLSEDLKRAKYIGTEKPMLKNKNIALLFEKDSTRTR
CCCCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEECCCCCCE
CAFEVAAHDQGANVTYLGPTGSQMGKKETTKDTARVLGGMYDGIEYRGFSQRTVETLAEN
EEEEEEECCCCCEEEEECCCCHHCCCCCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHC
SGVPVWNGLTDEDHPTQVLADFLTAKEVLKKDYADINFTYVGDGRNNVANALMQGAAIMG
CCCCEECCCCCCCCHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHCCCEEC
MNFHLVCPKELNPTDELLNRCKNIAAENGGNILITDDIDQGVKGSDVIYTDVWVSMGEPD
CEEEEECCCCCCCHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCCCEEEEEEEEECCCHH
EVWKERLELLKPYQVNKEMMDKTGNPNVIFEHCLPSFHNADTKIGQQIFEKYGIREMEVT
HHHHHHHHHHCCCCCCHHHHHCCCCCCEEHHHCCCCCCCCHHHHHHHHHHHHCCEEEHHH
DEVFESKASVVFQEAENRMHTIKAVMVATLGEF
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MKNLRNRSFLTLLDFSRQEVEFLLTLSEDLKRAKYIGTEKPMLKNKNIALLFEKDSTRTR
CCCCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEECCCCCCE
CAFEVAAHDQGANVTYLGPTGSQMGKKETTKDTARVLGGMYDGIEYRGFSQRTVETLAEN
EEEEEEECCCCCEEEEECCCCHHCCCCCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHC
SGVPVWNGLTDEDHPTQVLADFLTAKEVLKKDYADINFTYVGDGRNNVANALMQGAAIMG
CCCCEECCCCCCCCHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHCCCEEC
MNFHLVCPKELNPTDELLNRCKNIAAENGGNILITDDIDQGVKGSDVIYTDVWVSMGEPD
CEEEEECCCCCCCHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCCCEEEEEEEEECCCHH
EVWKERLELLKPYQVNKEMMDKTGNPNVIFEHCLPSFHNADTKIGQQIFEKYGIREMEVT
HHHHHHHHHHCCCCCCHHHHHCCCCCCEEHHHCCCCCCCCHHHHHHHHHHHHCCEEEHHH
DEVFESKASVVFQEAENRMHTIKAVMVATLGEF
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA