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The map label for this gene is oppC [H]

Identifier: 148267420

GI number: 148267420

Start: 1038081

End: 1039151

Strand: Direct

Name: oppC [H]

Synonym: SaurJH9_0986

Alternate gene names: 148267420

Gene position: 1038081-1039151 (Clockwise)

Preceding gene: 148267419

Following gene: 148267421

Centisome position: 35.71

GC content: 34.08

Gene sequence:

>1071_bases
ATGGCTGAAAATAAAAACAATTTGTCGATTAACGACGATCATTCTAATGCAGCTATGACGCATACCTCTGACGCTATCGC
ATCATCTGATTTTATTATTAGAGAATTAGACTTGAATCAGGAACCTGAAATGCAACGAGAAAGCAAAAACTTTTGGCAAG
ATGCTTGGGCTCAGTTAAAACGAAATAAGTTAGCTGTTGTCGGTATGATAGGTTTAATTATCATTGTAATATTTGCTTTT
ATCGGTCCAGTTATAAATAAACATGATTATGCTGAACAAAATGTAGAACATAGAAATCTTCCGGCAAAAATACCTGTATT
AGACAAAGTTCCATTTTTACCTTTTGATGGTAAAGATGCAGATGGCAAGGATGCTTATAAAGCAGCAAATGCTAAAGAAA
ATTATTGGTTTGGTACTGATCAGTTGGGTCGAGATTTATGGACAAGAACATGGAAAGGTGCTCAAATTTCATTGTTTATC
GGTGTTGTTGCAGCGATGTTAGATATTTTTATTGGCGTTGTATATGGTGCGATTTCTGGATTCTTCGGTGGACGTGTCGA
TACGATTATGCAACGTATACTTGAAGTCATAGCATCTATTCCGAATTTAATTGTCGTAATTTTATTTGTATTAATTTTTG
AACCATCCATTTGGACAATTATATTGGCTATGTCTATCACAGGCTGGTTAGGCATGAGCAGAGTTGTACGTGGAGAATTT
TTAAAATTGAAAAATCAAGAGTTTGTCATGGCTTCGAAAACATTGGGGGCTTCAAAATTCAAATTGATATTTAAGCATAT
TTTACCTAATACGTTAGGTGCTATCGTGGTTACATCAATGTTTACAGTACCTAGTGCTATTTTCTTCGAAGCATTTTTAA
GTTTCATTGGTATAGGTGTACCTGCACCTCAAACATCGTTAGGGTCATTAGTAAATGATGGGCGCGCAATGTTATTAATT
TATCCACATGAATTATTTATACCAGCAATGATTTTAAGTTTATTAATTCTATTCTTTTACTTATTTAGTGATGGATTACG
TGATGCATTTGATCCGAAAATGCGTAAATAA

Upstream 100 bases:

>100_bases
CACTATTATTTAGCACACTGTTTATCGTTTCTATTTTTATTGTAGATATTTTGTACGGTGTGATAGATCCACGAATTCGT
GTTCAAGGAGGTAAAAAATA

Downstream 100 bases:

>100_bases
AAGGGGGCATAGCATATGACTGAAAGAATATTAGAAGTAAATGATTTGCATGTTTCCTTTGATATTACAGCAGGGGAAGT
GCAGGCAGTGAGAGGTGTAG

Product: binding-protein-dependent transport systems inner membrane component

Products: ADP; phosphate; oligopeptides [Cytoplasm] [C]

Alternate protein names: Stage 0 sporulation protein KC [H]

Number of amino acids: Translated: 356; Mature: 355

Protein sequence:

>356_residues
MAENKNNLSINDDHSNAAMTHTSDAIASSDFIIRELDLNQEPEMQRESKNFWQDAWAQLKRNKLAVVGMIGLIIIVIFAF
IGPVINKHDYAEQNVEHRNLPAKIPVLDKVPFLPFDGKDADGKDAYKAANAKENYWFGTDQLGRDLWTRTWKGAQISLFI
GVVAAMLDIFIGVVYGAISGFFGGRVDTIMQRILEVIASIPNLIVVILFVLIFEPSIWTIILAMSITGWLGMSRVVRGEF
LKLKNQEFVMASKTLGASKFKLIFKHILPNTLGAIVVTSMFTVPSAIFFEAFLSFIGIGVPAPQTSLGSLVNDGRAMLLI
YPHELFIPAMILSLLILFFYLFSDGLRDAFDPKMRK

Sequences:

>Translated_356_residues
MAENKNNLSINDDHSNAAMTHTSDAIASSDFIIRELDLNQEPEMQRESKNFWQDAWAQLKRNKLAVVGMIGLIIIVIFAF
IGPVINKHDYAEQNVEHRNLPAKIPVLDKVPFLPFDGKDADGKDAYKAANAKENYWFGTDQLGRDLWTRTWKGAQISLFI
GVVAAMLDIFIGVVYGAISGFFGGRVDTIMQRILEVIASIPNLIVVILFVLIFEPSIWTIILAMSITGWLGMSRVVRGEF
LKLKNQEFVMASKTLGASKFKLIFKHILPNTLGAIVVTSMFTVPSAIFFEAFLSFIGIGVPAPQTSLGSLVNDGRAMLLI
YPHELFIPAMILSLLILFFYLFSDGLRDAFDPKMRK
>Mature_355_residues
AENKNNLSINDDHSNAAMTHTSDAIASSDFIIRELDLNQEPEMQRESKNFWQDAWAQLKRNKLAVVGMIGLIIIVIFAFI
GPVINKHDYAEQNVEHRNLPAKIPVLDKVPFLPFDGKDADGKDAYKAANAKENYWFGTDQLGRDLWTRTWKGAQISLFIG
VVAAMLDIFIGVVYGAISGFFGGRVDTIMQRILEVIASIPNLIVVILFVLIFEPSIWTIILAMSITGWLGMSRVVRGEFL
KLKNQEFVMASKTLGASKFKLIFKHILPNTLGAIVVTSMFTVPSAIFFEAFLSFIGIGVPAPQTSLGSLVNDGRAMLLIY
PHELFIPAMILSLLILFFYLFSDGLRDAFDPKMRK

Specific function: Part of the binding-protein-dependent transport system for oligopeptides; probably responsible for the translocation of the substrate across the membrane. Also required for sporulation and competence [H]

COG id: COG1173

COG function: function code EP; ABC-type dipeptide/oligopeptide/nickel transport systems, permease components

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI1787498, Length=317, Percent_Identity=36.2776025236593, Blast_Score=187, Evalue=8e-49,
Organism=Escherichia coli, GI1787054, Length=323, Percent_Identity=31.5789473684211, Blast_Score=172, Evalue=2e-44,
Organism=Escherichia coli, GI1787760, Length=320, Percent_Identity=30.625, Blast_Score=152, Evalue=3e-38,
Organism=Escherichia coli, GI1788505, Length=277, Percent_Identity=30.6859205776173, Blast_Score=134, Evalue=8e-33,
Organism=Escherichia coli, GI1789889, Length=243, Percent_Identity=28.8065843621399, Blast_Score=126, Evalue=2e-30,
Organism=Escherichia coli, GI1789964, Length=224, Percent_Identity=33.4821428571429, Blast_Score=113, Evalue=1e-26,
Organism=Escherichia coli, GI1787549, Length=309, Percent_Identity=22.3300970873786, Blast_Score=89, Evalue=6e-19,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 39766; Mature: 39635

Theoretical pI: Translated: 7.19; Mature: 7.19

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.7 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAENKNNLSINDDHSNAAMTHTSDAIASSDFIIRELDLNQEPEMQRESKNFWQDAWAQLK
CCCCCCCCCCCCCCCCCCEECCHHHHHCCCCEEEECCCCCCCHHHHHHHHHHHHHHHHHH
RNKLAVVGMIGLIIIVIFAFIGPVINKHDYAEQNVEHRNLPAKIPVLDKVPFLPFDGKDA
HCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHCCHHCCCCCCCCCCCCCCCCCCCCCCC
DGKDAYKAANAKENYWFGTDQLGRDLWTRTWKGAQISLFIGVVAAMLDIFIGVVYGAISG
CCCHHHHHCCCCCCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
FFGGRVDTIMQRILEVIASIPNLIVVILFVLIFEPSIWTIILAMSITGWLGMSRVVRGEF
HCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHH
LKLKNQEFVMASKTLGASKFKLIFKHILPNTLGAIVVTSMFTVPSAIFFEAFLSFIGIGV
HHHCCCCCEEHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
PAPQTSLGSLVNDGRAMLLIYPHELFIPAMILSLLILFFYLFSDGLRDAFDPKMRK
CCCCHHHHHHHCCCCEEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure 
AENKNNLSINDDHSNAAMTHTSDAIASSDFIIRELDLNQEPEMQRESKNFWQDAWAQLK
CCCCCCCCCCCCCCCCCEECCHHHHHCCCCEEEECCCCCCCHHHHHHHHHHHHHHHHHH
RNKLAVVGMIGLIIIVIFAFIGPVINKHDYAEQNVEHRNLPAKIPVLDKVPFLPFDGKDA
HCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHCCHHCCCCCCCCCCCCCCCCCCCCCCC
DGKDAYKAANAKENYWFGTDQLGRDLWTRTWKGAQISLFIGVVAAMLDIFIGVVYGAISG
CCCHHHHHCCCCCCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
FFGGRVDTIMQRILEVIASIPNLIVVILFVLIFEPSIWTIILAMSITGWLGMSRVVRGEF
HCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHH
LKLKNQEFVMASKTLGASKFKLIFKHILPNTLGAIVVTSMFTVPSAIFFEAFLSFIGIGV
HHHCCCCCEEHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
PAPQTSLGSLVNDGRAMLLIYPHELFIPAMILSLLILFFYLFSDGLRDAFDPKMRK
CCCCHHHHHHHCCCCEEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ATP; oligopeptides [Periplasm]; H2O [C]

Specific reaction: ATP + oligopeptides [Periplasm] + H2O = ADP + phosphate + oligopeptides [Cytoplasm] [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 1901616; 1899858; 9384377 [H]