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The map label for this gene is fabF [H]

Identifier: 148267417

GI number: 148267417

Start: 1035242

End: 1036486

Strand: Direct

Name: fabF [H]

Synonym: SaurJH9_0983

Alternate gene names: 148267417

Gene position: 1035242-1036486 (Clockwise)

Preceding gene: 148267416

Following gene: 148267419

Centisome position: 35.62

GC content: 39.36

Gene sequence:

>1245_bases
ATGAGTCAAAATAAAAGAGTAGTTATTACAGGTATGGGAGCCCTTTCTCCAATCGGTAATGATGTCAAAACAACATGGGA
GAATGCTCTAAAAGGCGTAAATGGTATCGATAAAATTACACGTATCGATACTGAACCTTATAGCGTTCACTTAGCAGGAG
AACTTAAAAACTTTAATATTGAAGATCATATCGACAAAAAAGAAGCGCGTCGTATGGATAGATTTACTCAATATGCAATT
GTAGCAGCTAGAGAGGCTGTTAAAGATGCGCAATTAGATATCAATGATAATACTGCAGATCGAATCGGTGTATGGATTGG
TTCTGGTATCGGTGGTATGGAAACATTTGAAATTGCACATAAACAATTAATGGATAAAGGCCCAAGACGTGTGAGTCCAT
TTTTCGTACCAATGTTAATTCCTGATATGGCAACTGGGCAAGTATCAATTGACTTAGGTGCAAAAGGACCAAATGGTGCA
ACAGTTACAGCATGTGCAACAGGTACAAACTCAATCGGAGAAGCATTTAAAATTGTGCAACGCGGTGATGCAGATGCAAT
GATTACTGGTGGTACGGAAGCTCCAATCACTCATATGGCAATTGCAGGTTTCAGTGCAAGTCGAGCGCTTTCTACAAATG
ATGACATTGAAACAGCATGTCGTCCATTCCAAGAAGGTAGAGACGGTTTTGTTATGGGTGAAGGTGCTGGTATTTTAGTA
ATCGAATCTTTAGAATCAGCACAAGCTCGAGGTGCCAATATTTATGCTGAGATAGTTGGCTATGGTACTACAGGTGATGC
TTATCATATTACAGCGCCAGCTCCAGAAGGTGAAGGCGGTTCTAGAGCAATGCAAGCAGCTATGGATGATGCTGGTATTG
AACCTAAAGATGTACAATACTTAAATGCCCATGGTACAAGTACTCCTGTTGGTGACTTAAATGAAGTTAAAGCTATTAAA
AATACATTTGGTGAAGCAGCTAAACACTTAAAAGTTAGCTCAACAAAATCAATGACTGGTCACTTACTTGGTGCAACAGG
TGGAATTGAAGCAATCTTCTCAGCGCTTTCAATTAAAGACTCTAAAGTCGCACCGACAATACATGCGGTAACACCAGACC
CAGAATGTGATTTGGATATTGTTCCAAATGAAGCGCAAGACCTTGATATTACTTATGCAATGAGTAATAGCTTAGGATTC
GGTGGACATAACGCAGTATTAGTATTCAAGAAATTTGAAGCATAA

Upstream 100 bases:

>100_bases
GTAAACTCAAAGATGATGATACAATTGTTCTTGTCGGATTCGGTGGCGGCCTAACTTGGGGCGCAATGACAATAAAATGG
GGAAAATAGGAGGATAACGA

Downstream 100 bases:

>100_bases
TTATAAAAATCTTCAGTAACGTTGTTTTAGTTACTGAAGATTTTTTCTGTTTCTTTATACTAAGATGAGCGACAGCACAA
TCGTCATAATAAAATATAGA

Product: Beta-ketoacyl synthase-like protein

Products: NA

Alternate protein names: 3-oxoacyl-[acyl-carrier-protein] synthase II; Beta-ketoacyl-ACP synthase II; KAS II [H]

Number of amino acids: Translated: 414; Mature: 413

Protein sequence:

>414_residues
MSQNKRVVITGMGALSPIGNDVKTTWENALKGVNGIDKITRIDTEPYSVHLAGELKNFNIEDHIDKKEARRMDRFTQYAI
VAAREAVKDAQLDINDNTADRIGVWIGSGIGGMETFEIAHKQLMDKGPRRVSPFFVPMLIPDMATGQVSIDLGAKGPNGA
TVTACATGTNSIGEAFKIVQRGDADAMITGGTEAPITHMAIAGFSASRALSTNDDIETACRPFQEGRDGFVMGEGAGILV
IESLESAQARGANIYAEIVGYGTTGDAYHITAPAPEGEGGSRAMQAAMDDAGIEPKDVQYLNAHGTSTPVGDLNEVKAIK
NTFGEAAKHLKVSSTKSMTGHLLGATGGIEAIFSALSIKDSKVAPTIHAVTPDPECDLDIVPNEAQDLDITYAMSNSLGF
GGHNAVLVFKKFEA

Sequences:

>Translated_414_residues
MSQNKRVVITGMGALSPIGNDVKTTWENALKGVNGIDKITRIDTEPYSVHLAGELKNFNIEDHIDKKEARRMDRFTQYAI
VAAREAVKDAQLDINDNTADRIGVWIGSGIGGMETFEIAHKQLMDKGPRRVSPFFVPMLIPDMATGQVSIDLGAKGPNGA
TVTACATGTNSIGEAFKIVQRGDADAMITGGTEAPITHMAIAGFSASRALSTNDDIETACRPFQEGRDGFVMGEGAGILV
IESLESAQARGANIYAEIVGYGTTGDAYHITAPAPEGEGGSRAMQAAMDDAGIEPKDVQYLNAHGTSTPVGDLNEVKAIK
NTFGEAAKHLKVSSTKSMTGHLLGATGGIEAIFSALSIKDSKVAPTIHAVTPDPECDLDIVPNEAQDLDITYAMSNSLGF
GGHNAVLVFKKFEA
>Mature_413_residues
SQNKRVVITGMGALSPIGNDVKTTWENALKGVNGIDKITRIDTEPYSVHLAGELKNFNIEDHIDKKEARRMDRFTQYAIV
AAREAVKDAQLDINDNTADRIGVWIGSGIGGMETFEIAHKQLMDKGPRRVSPFFVPMLIPDMATGQVSIDLGAKGPNGAT
VTACATGTNSIGEAFKIVQRGDADAMITGGTEAPITHMAIAGFSASRALSTNDDIETACRPFQEGRDGFVMGEGAGILVI
ESLESAQARGANIYAEIVGYGTTGDAYHITAPAPEGEGGSRAMQAAMDDAGIEPKDVQYLNAHGTSTPVGDLNEVKAIKN
TFGEAAKHLKVSSTKSMTGHLLGATGGIEAIFSALSIKDSKVAPTIHAVTPDPECDLDIVPNEAQDLDITYAMSNSLGFG
GHNAVLVFKKFEA

Specific function: Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP [H]

COG id: COG0304

COG function: function code IQ; 3-oxoacyl-(acyl-carrier-protein) synthase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the beta-ketoacyl-ACP synthases family [H]

Homologues:

Organism=Homo sapiens, GI8923559, Length=416, Percent_Identity=44.9519230769231, Blast_Score=348, Evalue=5e-96,
Organism=Homo sapiens, GI223972627, Length=170, Percent_Identity=46.4705882352941, Blast_Score=149, Evalue=4e-36,
Organism=Homo sapiens, GI41872631, Length=420, Percent_Identity=25.2380952380952, Blast_Score=118, Evalue=1e-26,
Organism=Escherichia coli, GI1787337, Length=410, Percent_Identity=51.4634146341463, Blast_Score=396, Evalue=1e-111,
Organism=Escherichia coli, GI1788663, Length=416, Percent_Identity=39.6634615384615, Blast_Score=239, Evalue=3e-64,
Organism=Caenorhabditis elegans, GI71983541, Length=414, Percent_Identity=35.5072463768116, Blast_Score=252, Evalue=2e-67,
Organism=Caenorhabditis elegans, GI71983535, Length=258, Percent_Identity=40.6976744186046, Blast_Score=195, Evalue=3e-50,
Organism=Caenorhabditis elegans, GI212642053, Length=424, Percent_Identity=27.5943396226415, Blast_Score=118, Evalue=6e-27,
Organism=Caenorhabditis elegans, GI17550940, Length=352, Percent_Identity=23.5795454545455, Blast_Score=76, Evalue=3e-14,
Organism=Saccharomyces cerevisiae, GI6320904, Length=448, Percent_Identity=37.9464285714286, Blast_Score=284, Evalue=1e-77,
Organism=Drosophila melanogaster, GI24644341, Length=420, Percent_Identity=43.0952380952381, Blast_Score=333, Evalue=1e-91,
Organism=Drosophila melanogaster, GI221330659, Length=425, Percent_Identity=25.4117647058824, Blast_Score=116, Evalue=2e-26,
Organism=Drosophila melanogaster, GI19920632, Length=425, Percent_Identity=25.4117647058824, Blast_Score=116, Evalue=3e-26,
Organism=Drosophila melanogaster, GI24581345, Length=421, Percent_Identity=22.5653206650831, Blast_Score=100, Evalue=2e-21,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR017568
- InterPro:   IPR000794
- InterPro:   IPR018201
- InterPro:   IPR014031
- InterPro:   IPR014030
- InterPro:   IPR016039
- InterPro:   IPR016038 [H]

Pfam domain/function: PF00109 ketoacyl-synt; PF02801 Ketoacyl-synt_C [H]

EC number: =2.3.1.179 [H]

Molecular weight: Translated: 43726; Mature: 43595

Theoretical pI: Translated: 4.82; Mature: 4.82

Prosite motif: PS00606 B_KETOACYL_SYNTHASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSQNKRVVITGMGALSPIGNDVKTTWENALKGVNGIDKITRIDTEPYSVHLAGELKNFNI
CCCCCEEEEEECCCCCCCCCHHHHHHHHHHCCCCCHHHHHEECCCCEEEEEEEECCCCCC
EDHIDKKEARRMDRFTQYAIVAAREAVKDAQLDINDNTADRIGVWIGSGIGGMETFEIAH
HHCCCHHHHHHHHHHHHHHHHHHHHHHHHCEEECCCCCCCEEEEEEECCCCCHHHHHHHH
KQLMDKGPRRVSPFFVPMLIPDMATGQVSIDLGAKGPNGATVTACATGTNSIGEAFKIVQ
HHHHHCCCCCCCCEEEEEECCCCCCCEEEEEECCCCCCCCEEEEEECCCCHHHHHHHHHH
RGDADAMITGGTEAPITHMAIAGFSASRALSTNDDIETACRPFQEGRDGFVMGEGAGILV
CCCCCEEEECCCCCCCCEEEEECCCCCCCCCCCCCHHHHHHHHHCCCCCEEEECCCCEEE
IESLESAQARGANIYAEIVGYGTTGDAYHITAPAPEGEGGSRAMQAAMDDAGIEPKDVQY
EECCHHHHCCCCEEEEEEEEECCCCCEEEEECCCCCCCCHHHHHHHHHHHCCCCCCCEEE
LNAHGTSTPVGDLNEVKAIKNTFGEAAKHLKVSSTKSMTGHLLGATGGIEAIFSALSIKD
EECCCCCCCCCCHHHHHHHHHHHHHHHHHEECCCCCCCCCEEEECCCCHHHHHHHHHCCC
SKVAPTIHAVTPDPECDLDIVPNEAQDLDITYAMSNSLGFGGHNAVLVFKKFEA
CCCCCEEEEECCCCCCCEEECCCCCCCCEEEEEECCCCCCCCCCEEEEEEECCC
>Mature Secondary Structure 
SQNKRVVITGMGALSPIGNDVKTTWENALKGVNGIDKITRIDTEPYSVHLAGELKNFNI
CCCCEEEEEECCCCCCCCCHHHHHHHHHHCCCCCHHHHHEECCCCEEEEEEEECCCCCC
EDHIDKKEARRMDRFTQYAIVAAREAVKDAQLDINDNTADRIGVWIGSGIGGMETFEIAH
HHCCCHHHHHHHHHHHHHHHHHHHHHHHHCEEECCCCCCCEEEEEEECCCCCHHHHHHHH
KQLMDKGPRRVSPFFVPMLIPDMATGQVSIDLGAKGPNGATVTACATGTNSIGEAFKIVQ
HHHHHCCCCCCCCEEEEEECCCCCCCEEEEEECCCCCCCCEEEEEECCCCHHHHHHHHHH
RGDADAMITGGTEAPITHMAIAGFSASRALSTNDDIETACRPFQEGRDGFVMGEGAGILV
CCCCCEEEECCCCCCCCEEEEECCCCCCCCCCCCCHHHHHHHHHCCCCCEEEECCCCEEE
IESLESAQARGANIYAEIVGYGTTGDAYHITAPAPEGEGGSRAMQAAMDDAGIEPKDVQY
EECCHHHHCCCCEEEEEEEEECCCCCEEEEECCCCCCCCHHHHHHHHHHHCCCCCCCEEE
LNAHGTSTPVGDLNEVKAIKNTFGEAAKHLKVSSTKSMTGHLLGATGGIEAIFSALSIKD
EECCCCCCCCCCHHHHHHHHHHHHHHHHHEECCCCCCCCCEEEECCCCHHHHHHHHHCCC
SKVAPTIHAVTPDPECDLDIVPNEAQDLDITYAMSNSLGFGGHNAVLVFKKFEA
CCCCCEEEEECCCCCCCEEECCCCCCCCEEEEEECCCCCCCCCCEEEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA