Click here to switch to the map view.

The map label for this gene is yutD [H]

Identifier: 148267358

GI number: 148267358

Start: 972265

End: 972648

Strand: Direct

Name: yutD [H]

Synonym: SaurJH9_0924

Alternate gene names: 148267358

Gene position: 972265-972648 (Clockwise)

Preceding gene: 148267357

Following gene: 148267359

Centisome position: 33.45

GC content: 28.12

Gene sequence:

>384_bases
TTGATAAAAGTAGATCAACATTACTTTGAATTAATAGAAAATTATCGCGAATGTTTTAATGAAGAACAATTTATTGCTAG
GTATTCAGATATTTTAGACAAATATGATTACATTGTTGGTGACTATGGTTACGATCAATTACGATTAAAAGGCTTTTACA
AAGATTCTAATAAAAAAGCAGAGATGAGTAAACGTTTTTCAAATATTCAAGATTACATATTTGAATATTGTAACTTTGGT
TGTCCTTACTTTGTATTAAGACATTTGTCTAAACAAGAGGTTAAAAAGTTAATCGAAGAAGTTCATCCGTCTGATGTGAT
AGATGACGACAATAAACTTCAAGATGTGAAGATTAAGCCAACCATTCAAGATACTGAACATTAA

Upstream 100 bases:

>100_bases
TAGTTTGTACAAAACGAACGTGTCATAGAAGTAATCATTATTTTTATGAAACACTAAAAGTATAAACTGAGCCTTTCATT
GTCATAGATAGGTGAAGAAT

Downstream 100 bases:

>100_bases
TAAAACCCTTAGCTAGATTGAAAATGGGAATCATGCAATTCAAGCATGGACCTGTAATCTAGTTAGGGGTTTTTATCTTT
AATGAAGGTTCTTCATCTTT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 127; Mature: 127

Protein sequence:

>127_residues
MIKVDQHYFELIENYRECFNEEQFIARYSDILDKYDYIVGDYGYDQLRLKGFYKDSNKKAEMSKRFSNIQDYIFEYCNFG
CPYFVLRHLSKQEVKKLIEEVHPSDVIDDDNKLQDVKIKPTIQDTEH

Sequences:

>Translated_127_residues
MIKVDQHYFELIENYRECFNEEQFIARYSDILDKYDYIVGDYGYDQLRLKGFYKDSNKKAEMSKRFSNIQDYIFEYCNFG
CPYFVLRHLSKQEVKKLIEEVHPSDVIDDDNKLQDVKIKPTIQDTEH
>Mature_127_residues
MIKVDQHYFELIENYRECFNEEQFIARYSDILDKYDYIVGDYGYDQLRLKGFYKDSNKKAEMSKRFSNIQDYIFEYCNFG
CPYFVLRHLSKQEVKKLIEEVHPSDVIDDDNKLQDVKIKPTIQDTEH

Specific function: Unknown

COG id: COG4470

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009370 [H]

Pfam domain/function: PF06265 DUF1027 [H]

EC number: NA

Molecular weight: Translated: 15401; Mature: 15401

Theoretical pI: Translated: 4.86; Mature: 4.86

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.4 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
2.4 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIKVDQHYFELIENYRECFNEEQFIARYSDILDKYDYIVGDYGYDQLRLKGFYKDSNKKA
CCCCHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCHHH
EMSKRFSNIQDYIFEYCNFGCPYFVLRHLSKQEVKKLIEEVHPSDVIDDDNKLQDVKIKP
HHHHHHHHHHHHHHHHHCCCCHHHHHHHCCHHHHHHHHHHCCCCCCCCCCCCEECEEECC
TIQDTEH
CCCCCCC
>Mature Secondary Structure
MIKVDQHYFELIENYRECFNEEQFIARYSDILDKYDYIVGDYGYDQLRLKGFYKDSNKKA
CCCCHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCHHH
EMSKRFSNIQDYIFEYCNFGCPYFVLRHLSKQEVKKLIEEVHPSDVIDDDNKLQDVKIKP
HHHHHHHHHHHHHHHHHCCCCHHHHHHHCCHHHHHHHHHHCCCCCCCCCCCCEECEEECC
TIQDTEH
CCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]