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The map label for this gene is yusF [H]

Identifier: 148267270

GI number: 148267270

Start: 909530

End: 909919

Strand: Direct

Name: yusF [H]

Synonym: SaurJH9_0836

Alternate gene names: 148267270

Gene position: 909530-909919 (Clockwise)

Preceding gene: 148267269

Following gene: 148267271

Centisome position: 31.29

GC content: 30.51

Gene sequence:

>390_bases
ATGATGGCTATTGTAAATAAAGTGATAATTGTTGAAGGAAAATCTGATAAAAAAAGGGTGCAACAGGTTATTGCAGAACC
AGTCAATATTATTTGTACTCATGGAACAATGAGTATAGATAAGCTTGATGATATGATAGAATCACTGTATGATAAACAAG
TTTTTGTATTAGCCGATTCTGATGACGAAGGAGATCGAATTAGAAATTGGTTTAAACGTTATTTGAGTGAAAGTGAACAT
ATATTTATTGATAAAACTTACTGTCAAGTTGCGAATTGCCCCAAACAATATTTGGCGCATGTACTTTCAAAACATGGCTT
TACTTGTAAGAAAGAAACACCTCTTTTACCGAATATAAATAATGAAAGGTTAGTTTTAGTAAATGAATAA

Upstream 100 bases:

>100_bases
TATATTAAGCTAGTTTAAATTTTTTGTGATTTATGTTTTATTCATACCAATTTTGTGAAATGATACAGTGACAGATGTTT
ATTGATTTTAAAGGGTGATG

Downstream 100 bases:

>100_bases
TTCATTAGACATCAAAGATGTAACTACATTTTATGAGGAAGACAAACATTTAATCTTTGGTTATACACCAACGTGTGGTA
CTTGTAAGGTTTCAGAAAGA

Product: TOPRIM domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 129; Mature: 129

Protein sequence:

>129_residues
MMAIVNKVIIVEGKSDKKRVQQVIAEPVNIICTHGTMSIDKLDDMIESLYDKQVFVLADSDDEGDRIRNWFKRYLSESEH
IFIDKTYCQVANCPKQYLAHVLSKHGFTCKKETPLLPNINNERLVLVNE

Sequences:

>Translated_129_residues
MMAIVNKVIIVEGKSDKKRVQQVIAEPVNIICTHGTMSIDKLDDMIESLYDKQVFVLADSDDEGDRIRNWFKRYLSESEH
IFIDKTYCQVANCPKQYLAHVLSKHGFTCKKETPLLPNINNERLVLVNE
>Mature_129_residues
MMAIVNKVIIVEGKSDKKRVQQVIAEPVNIICTHGTMSIDKLDDMIESLYDKQVFVLADSDDEGDRIRNWFKRYLSESEH
IFIDKTYCQVANCPKQYLAHVLSKHGFTCKKETPLLPNINNERLVLVNE

Specific function: Unknown

COG id: COG1658

COG function: function code L; Small primase-like proteins (Toprim domain)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 Toprim domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006171 [H]

Pfam domain/function: PF01751 Toprim [H]

EC number: NA

Molecular weight: Translated: 14883; Mature: 14883

Theoretical pI: Translated: 6.51; Mature: 6.51

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.1 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
6.2 %Cys+Met (Translated Protein)
3.1 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
6.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMAIVNKVIIVEGKSDKKRVQQVIAEPVNIICTHGTMSIDKLDDMIESLYDKQVFVLADS
CCEEEEEEEEEECCCHHHHHHHHHHCCCEEEECCCCCCHHHHHHHHHHHHCCEEEEEECC
DDEGDRIRNWFKRYLSESEHIFIDKTYCQVANCPKQYLAHVLSKHGFTCKKETPLLPNIN
CCCCHHHHHHHHHHHCCCCEEEEEHHHHHHHCCHHHHHHHHHHHCCCCCCCCCCCCCCCC
NERLVLVNE
CCEEEEEEC
>Mature Secondary Structure
MMAIVNKVIIVEGKSDKKRVQQVIAEPVNIICTHGTMSIDKLDDMIESLYDKQVFVLADS
CCEEEEEEEEEECCCHHHHHHHHHHCCCEEEECCCCCCHHHHHHHHHHHHCCEEEEEECC
DDEGDRIRNWFKRYLSESEHIFIDKTYCQVANCPKQYLAHVLSKHGFTCKKETPLLPNIN
CCCCHHHHHHHHHHHCCCCEEEEEHHHHHHHCCHHHHHHHHHHHCCCCCCCCCCCCCCCC
NERLVLVNE
CCEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]